RNA–Protein interactions for RNA: ENST00000476139.5

TVP23B-202, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 1 (best) BASIC

Gene TVP23B, Length 2,989 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-202ENST00000476139 FOXD1Q16676 465 aa23.78■■□□□ 1.4
TVP23B-202ENST00000476139 CFDP1Q9UEE9 299 aaPredicted RBP23.77■■□□□ 1.4
TVP23B-202ENST00000476139 MPHOSPH9Q99550 1183 aa23.77■■□□□ 1.4
TVP23B-202ENST00000476139 ZNF777Q9ULD5 760 aaPredicted RBP23.77■■□□□ 1.4
TVP23B-202ENST00000476139 AKNAQ7Z591 1439 aa23.75■■□□□ 1.39
TVP23B-202ENST00000476139 GCC2Q8IWJ2 1684 aa23.74■■□□□ 1.39
TVP23B-202ENST00000476139 KCNH8Q96L42 1107 aa23.71■■□□□ 1.39
TVP23B-202ENST00000476139 PLEKHD1A6NEE1 506 aa23.7■■□□□ 1.38
TVP23B-202ENST00000476139 GPATCH8Q9UKJ3 1502 aaKnown RBP23.7■■□□□ 1.38
TVP23B-202ENST00000476139 KIF14Q15058 1648 aa23.7■■□□□ 1.38
TVP23B-202ENST00000476139 ROCK1Q13464 1354 aa23.69■■□□□ 1.38
TVP23B-202ENST00000476139 DNMT1P26358 1616 aaKnown RBP23.67■■□□□ 1.38
TVP23B-202ENST00000476139 ATP10BO94823 1461 aa23.67■■□□□ 1.38
TVP23B-202ENST00000476139 CAMSAP2Q08AD1 1489 aa23.65■■□□□ 1.38
TVP23B-202ENST00000476139 KDM5BQ9UGL1 1544 aa23.65■■□□□ 1.38
TVP23B-202ENST00000476139 ABCA8O94911 1581 aa23.63■■□□□ 1.37
TVP23B-202ENST00000476139 PTPRGP23470 1445 aa23.62■■□□□ 1.37
TVP23B-202ENST00000476139 SLC4A1APQ9BWU0 796 aaKnown RBP23.61■■□□□ 1.37
TVP23B-202ENST00000476139 L3MBTL2Q969R5 705 aa23.59■■□□□ 1.37
TVP23B-202ENST00000476139 NCOA1Q15788 1441 aa23.58■■□□□ 1.37
TVP23B-202ENST00000476139 ADCY10Q96PN6 1610 aa23.56■■□□□ 1.36
TVP23B-202ENST00000476139 ANKRD30BQ9BXX2 1392 aa23.55■■□□□ 1.36
TVP23B-202ENST00000476139 ITSN2Q9NZM3 1697 aa23.54■■□□□ 1.36
TVP23B-202ENST00000476139 ABCC10Q5T3U5 1492 aa23.52■■□□□ 1.36
TVP23B-202ENST00000476139 CHD1O14646 1710 aa23.52■■□□□ 1.36
TVP23B-202ENST00000476139 HNRNPMP52272 730 aaKnown RBP eCLIP23.5■■□□□ 1.356e-8■■■□□ 15.2
TVP23B-202ENST00000476139 HSPA5P11021 654 aaKnown RBP23.49■■□□□ 1.35
TVP23B-202ENST00000476139 ANKRD30AQ9BXX3 1397 aa23.47■■□□□ 1.35
TVP23B-202ENST00000476139 CDC42BPAQ5VT25 1732 aa23.47■■□□□ 1.35
TVP23B-202ENST00000476139 PZPP20742 1482 aa23.45■■□□□ 1.35
TVP23B-202ENST00000476139 NBPF8Q3BBV2 869 aa23.45■■□□□ 1.34
TVP23B-202ENST00000476139 RPRD2Q5VT52 1461 aaKnown RBP23.45■■□□□ 1.34
TVP23B-202ENST00000476139 ADGRL2O95490 1459 aa23.44■■□□□ 1.34
TVP23B-202ENST00000476139 ERCC6L2Q5T890 1561 aa23.44■■□□□ 1.34
TVP23B-202ENST00000476139 ANP32CO43423 234 aa23.43■■□□□ 1.34
TVP23B-202ENST00000476139 TSPY4P0CV99 314 aa23.43■■□□□ 1.34
TVP23B-202ENST00000476139 TSPY10P0CW01 314 aa23.43■■□□□ 1.34
TVP23B-202ENST00000476139 ANKRD50Q9ULJ7 1429 aa23.43■■□□□ 1.34
TVP23B-202ENST00000476139 PKD2Q13563 968 aa23.42■■□□□ 1.34
TVP23B-202ENST00000476139 EIF4G2P78344 907 aaKnown RBP eCLIP23.41■■□□□ 1.34
TVP23B-202ENST00000476139 C9orf84Q5VXU9 1444 aa23.4■■□□□ 1.34
TVP23B-202ENST00000476139 WASHC2AQ641Q2 1341 aa23.4■■□□□ 1.34
TVP23B-202ENST00000476139 CROCC2H7BZ55 1655 aa23.39■■□□□ 1.33
TVP23B-202ENST00000476139 ADGBQ8N7X0 1667 aa23.39■■□□□ 1.33
TVP23B-202ENST00000476139 SUPT16HQ9Y5B9 1047 aaKnown RBP23.38■■□□□ 1.33
TVP23B-202ENST00000476139 TEX14Q8IWB6 1497 aa23.36■■□□□ 1.33
TVP23B-202ENST00000476139 SHROOM2Q13796 1616 aa23.35■■□□□ 1.33
TVP23B-202ENST00000476139 C11orf95C9JLR9 678 aaPredicted RBP23.35■■□□□ 1.33
TVP23B-202ENST00000476139 NUP155O75694 1391 aa23.35■■□□□ 1.33
TVP23B-202ENST00000476139 MBD5Q9P267 1494 aa23.35■■□□□ 1.33
TVP23B-202ENST00000476139 KIAA1107Q9UPP5 1409 aa23.33■■□□□ 1.33
TVP23B-202ENST00000476139 CCER2I3L3R5 266 aa23.32■■□□□ 1.32
TVP23B-202ENST00000476139 KIF15Q9NS87 1388 aa23.32■■□□□ 1.32
TVP23B-202ENST00000476139 SHANK2Q9UPX8 1470 aa23.31■■□□□ 1.32
TVP23B-202ENST00000476139 ZNF326Q5BKZ1 582 aaKnown RBP23.29■■□□□ 1.32
TVP23B-202ENST00000476139 SAMD9LQ8IVG5 1584 aa23.29■■□□□ 1.32
TVP23B-202ENST00000476139 CDC42BPBQ9Y5S2 1711 aa23.29■■□□□ 1.32
TVP23B-202ENST00000476139 ABCC2Q92887 1545 aa23.25■■□□□ 1.31
TVP23B-202ENST00000476139 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.25■■□□□ 1.31
TVP23B-202ENST00000476139 TTC37Q6PGP7 1564 aa23.25■■□□□ 1.31
TVP23B-202ENST00000476139 CCDC141Q6ZP82 1450 aa23.24■■□□□ 1.31
TVP23B-202ENST00000476139 BCANQ96GW7 911 aa23.23■■□□□ 1.31
TVP23B-202ENST00000476139 PREX2Q70Z35 1606 aa23.23■■□□□ 1.31
TVP23B-202ENST00000476139 ARHGEF5Q12774 1597 aa23.23■■□□□ 1.31
TVP23B-202ENST00000476139 ARHGAP5Q13017 1502 aa23.23■■□□□ 1.31
TVP23B-202ENST00000476139 RSPH4AQ5TD94 716 aa23.22■■□□□ 1.31
TVP23B-202ENST00000476139 SYCP2Q9BX26 1530 aa23.21■■□□□ 1.31
TVP23B-202ENST00000476139 SPATA31E1Q6ZUB1 1445 aa23.2■■□□□ 1.3
TVP23B-202ENST00000476139 CCDC7Q96M83 1385 aa23.19■■□□□ 1.3
TVP23B-202ENST00000476139 CLASP1Q7Z460 1538 aa23.18■■□□□ 1.3
TVP23B-202ENST00000476139 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.16■■□□□ 1.3
TVP23B-202ENST00000476139 KDM2AQ9Y2K7 1162 aa23.16■■□□□ 1.3
TVP23B-202ENST00000476139 KIF7Q2M1P5 1343 aa23.15■■□□□ 1.3
TVP23B-202ENST00000476139 CNTLNQ9NXG0 1405 aa23.12■■□□□ 1.29
TVP23B-202ENST00000476139 ARHGEF12Q9NZN5 1544 aa23.12■■□□□ 1.29
TVP23B-202ENST00000476139 KDM5DQ9BY66 1539 aa23.12■■□□□ 1.29
TVP23B-202ENST00000476139 CCDC184Q52MB2 194 aa23.11■■□□□ 1.29
TVP23B-202ENST00000476139 FKBP8Q14318 412 aa23.11■■□□□ 1.29
TVP23B-202ENST00000476139 DCAF11Q8TEB1 546 aa23.11■■□□□ 1.29
TVP23B-202ENST00000476139 ZCCHC11Q5TAX3 1644 aaKnown RBP23.1■■□□□ 1.29
TVP23B-202ENST00000476139 PLCH2O75038 1416 aa23.09■■□□□ 1.29
TVP23B-202ENST00000476139 FAM135AQ9P2D6 1515 aa23.09■■□□□ 1.29
TVP23B-202ENST00000476139 USP47Q96K76 1375 aa23.09■■□□□ 1.29
TVP23B-202ENST00000476139 EFCAB2Q5VUJ9 269 aa23.08■■□□□ 1.29
TVP23B-202ENST00000476139 POLR3GLQ9BT43 218 aa23.07■■□□□ 1.28
TVP23B-202ENST00000476139 MYO5CQ9NQX4 1742 aa23.07■■□□□ 1.28
TVP23B-202ENST00000476139 PRKRIP1Q9H875 184 aaPredicted RBP23.07■■□□□ 1.28
TVP23B-202ENST00000476139 UHRF1BP1LA0JNW5 1464 aa23.06■■□□□ 1.28
TVP23B-202ENST00000476139 PLEKHH2Q8IVE3 1493 aa23.06■■□□□ 1.28
TVP23B-202ENST00000476139 RGL3Q3MIN7 710 aa23.04■■□□□ 1.28
TVP23B-202ENST00000476139 CARD11Q9BXL7 1154 aa23.04■■□□□ 1.28
TVP23B-202ENST00000476139 CNGB1Q14028 1251 aaPredicted RBP23.03■■□□□ 1.28
TVP23B-202ENST00000476139 AFAP1Q8N556 730 aa23.03■■□□□ 1.28
TVP23B-202ENST00000476139 HNRNPUQ00839 825 aaKnown RBP eCLIP23.02■■□□□ 1.28
TVP23B-202ENST00000476139 UHRF1BP1Q6BDS2 1440 aa23.02■■□□□ 1.28
TVP23B-202ENST00000476139 TRAPPC8Q9Y2L5 1435 aa23.02■■□□□ 1.28
TVP23B-202ENST00000476139 MAST1Q9Y2H9 1570 aa23.01■■□□□ 1.27
TVP23B-202ENST00000476139 PLA2R1Q13018 1463 aa22.98■■□□□ 1.27
TVP23B-202ENST00000476139 CCDC144AA2RUR9 1427 aa22.98■■□□□ 1.27
TVP23B-202ENST00000476139 BCORL1Q5H9F3 1711 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms