RNA–Protein interactions for RNA: ENST00000472588.5

PAXBP1-208, Transcript of PAX3 and PAX7 binding protein 1, humanhuman

TSL 1 (best)

Gene PAXBP1, Length 1,410 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAXBP1-208ENST00000472588 PREX2Q70Z35 1606 aa34.01■■■■□ 3.03
PAXBP1-208ENST00000472588 CFDP1Q9UEE9 299 aaPredicted RBP34■■■■□ 3.03
PAXBP1-208ENST00000472588 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP33.97■■■■□ 3.03
PAXBP1-208ENST00000472588 ARAP3Q8WWN8 1544 aa33.96■■■■□ 3.03
PAXBP1-208ENST00000472588 PLCH2O75038 1416 aa33.96■■■■□ 3.03
PAXBP1-208ENST00000472588 PTPN23Q9H3S7 1636 aa33.96■■■■□ 3.03
PAXBP1-208ENST00000472588 CDC42BPBQ9Y5S2 1711 aa33.95■■■■□ 3.03
PAXBP1-208ENST00000472588 ARHGAP5Q13017 1502 aa33.92■■■■□ 3.02
PAXBP1-208ENST00000472588 TCOF1Q13428 1488 aaKnown RBP33.91■■■■□ 3.02
PAXBP1-208ENST00000472588 CD109Q6YHK3 1445 aa33.9■■■■□ 3.02
PAXBP1-208ENST00000472588 FAM50AQ14320 339 aaKnown RBP33.89■■■■□ 3.02
PAXBP1-208ENST00000472588 EFCAB2Q5VUJ9 269 aa33.87■■■■□ 3.01
PAXBP1-208ENST00000472588 TEX14Q8IWB6 1497 aa33.85■■■■□ 3.01
PAXBP1-208ENST00000472588 ZNF777Q9ULD5 760 aaPredicted RBP33.84■■■■□ 3.01
PAXBP1-208ENST00000472588 CAMSAP2Q08AD1 1489 aa33.83■■■■□ 3.01
PAXBP1-208ENST00000472588 PCGF6Q9BYE7 350 aa33.82■■■■□ 3
PAXBP1-208ENST00000472588 KDM6BO15054 1643 aa33.81■■■■□ 3
PAXBP1-208ENST00000472588 PLEKHH2Q8IVE3 1493 aa33.8■■■■□ 3
PAXBP1-208ENST00000472588 CFAP74Q9C0B2 1584 aa33.8■■■■□ 3
PAXBP1-208ENST00000472588 FANCAO15360 1455 aa33.78■■■■□ 3
PAXBP1-208ENST00000472588 SAMD9LQ8IVG5 1584 aa33.77■■■■□ 3
PAXBP1-208ENST00000472588 ZNF644Q9H582 1327 aaPredicted RBP33.76■■■□□ 2.99
PAXBP1-208ENST00000472588 KIAA1107Q9UPP5 1409 aa33.73■■■□□ 2.99
PAXBP1-208ENST00000472588 RSPH4AQ5TD94 716 aa33.71■■■□□ 2.99
PAXBP1-208ENST00000472588 NEO1Q92859 1461 aa33.7■■■□□ 2.99
PAXBP1-208ENST00000472588 DNMT1P26358 1616 aaKnown RBP33.69■■■□□ 2.98
PAXBP1-208ENST00000472588 ARHGEF5Q12774 1597 aa33.67■■■□□ 2.98
PAXBP1-208ENST00000472588 ITGAEP38570 1179 aa33.67■■■□□ 2.98
PAXBP1-208ENST00000472588 ABCC1P33527 1531 aa33.66■■■□□ 2.98
PAXBP1-208ENST00000472588 AKNAQ7Z591 1439 aa33.66■■■□□ 2.98
PAXBP1-208ENST00000472588 SYCP2Q9BX26 1530 aa33.64■■■□□ 2.98
PAXBP1-208ENST00000472588 DAPK1P53355 1430 aa33.64■■■□□ 2.98
PAXBP1-208ENST00000472588 ADGRL1O94910 1474 aa33.63■■■□□ 2.97
PAXBP1-208ENST00000472588 MBD5Q9P267 1494 aa33.63■■■□□ 2.97
PAXBP1-208ENST00000472588 COL17A1Q9UMD9 1497 aaPredicted RBP33.62■■■□□ 2.97
PAXBP1-208ENST00000472588 HNRNPMP52272 730 aaKnown RBP eCLIP33.62■■■□□ 2.971e-8■■■■□ 20.6
PAXBP1-208ENST00000472588 ABCC5O15440 1437 aa33.6■■■□□ 2.97
PAXBP1-208ENST00000472588 CCDC141Q6ZP82 1450 aa33.6■■■□□ 2.97
PAXBP1-208ENST00000472588 CROCC2H7BZ55 1655 aa33.58■■■□□ 2.97
PAXBP1-208ENST00000472588 TSPY4P0CV99 314 aa33.57■■■□□ 2.96
PAXBP1-208ENST00000472588 TSPY10P0CW01 314 aa33.57■■■□□ 2.96
PAXBP1-208ENST00000472588 SCAPERQ9BY12 1400 aa33.56■■■□□ 2.96
PAXBP1-208ENST00000472588 SHANK2Q9UPX8 1470 aa33.55■■■□□ 2.96
PAXBP1-208ENST00000472588 ARHGEF12Q9NZN5 1544 aa33.55■■■□□ 2.96
PAXBP1-208ENST00000472588 PTPRKQ15262 1439 aa33.52■■■□□ 2.96
PAXBP1-208ENST00000472588 ADGBQ8N7X0 1667 aa33.48■■■□□ 2.95
PAXBP1-208ENST00000472588 ROCK1Q13464 1354 aa33.48■■■□□ 2.95
PAXBP1-208ENST00000472588 ZNF518AQ6AHZ1 1483 aa33.47■■■□□ 2.95
PAXBP1-208ENST00000472588 TRAPPC8Q9Y2L5 1435 aa33.47■■■□□ 2.95
PAXBP1-208ENST00000472588 C9orf84Q5VXU9 1444 aa33.46■■■□□ 2.95
PAXBP1-208ENST00000472588 MAST1Q9Y2H9 1570 aa33.46■■■□□ 2.95
PAXBP1-208ENST00000472588 DENND4BO75064 1496 aaPredicted RBP33.46■■■□□ 2.95
PAXBP1-208ENST00000472588 CHIC2Q9UKJ5 165 aa33.45■■■□□ 2.95
PAXBP1-208ENST00000472588 ADGRL2O95490 1459 aa33.43■■■□□ 2.94
PAXBP1-208ENST00000472588 POGZQ7Z3K3 1410 aa33.43■■■□□ 2.94
PAXBP1-208ENST00000472588 ANKRD30AQ9BXX3 1397 aa33.42■■■□□ 2.94
PAXBP1-208ENST00000472588 AFAP1Q8N556 730 aa33.4■■■□□ 2.94
PAXBP1-208ENST00000472588 HFM1A2PYH4 1435 aa33.39■■■□□ 2.94
PAXBP1-208ENST00000472588 RTEL1-TNFRSF6BF6WH68 1400 aa33.39■■■□□ 2.94
PAXBP1-208ENST00000472588 SPAG9O60271 1321 aaKnown RBP33.39■■■□□ 2.94
PAXBP1-208ENST00000472588 FRMPD1Q5SYB0 1578 aa33.38■■■□□ 2.93
PAXBP1-208ENST00000472588 NCOA1Q15788 1441 aa33.38■■■□□ 2.93
PAXBP1-208ENST00000472588 RICTORQ6R327 1708 aa33.36■■■□□ 2.93
PAXBP1-208ENST00000472588 KDM5CP41229 1560 aa33.36■■■□□ 2.93
PAXBP1-208ENST00000472588 SETD5Q9C0A6 1442 aa33.35■■■□□ 2.93
PAXBP1-208ENST00000472588 RAPGEF3O95398 923 aa33.35■■■□□ 2.93
PAXBP1-208ENST00000472588 GCC2Q8IWJ2 1684 aa33.35■■■□□ 2.93
PAXBP1-208ENST00000472588 RRP7BPQ9NSQ0 103 aa33.33■■■□□ 2.93
PAXBP1-208ENST00000472588 PLXNC1O60486 1568 aa33.33■■■□□ 2.93
PAXBP1-208ENST00000472588 NAIPQ13075 1403 aa33.32■■■□□ 2.92
PAXBP1-208ENST00000472588 INO80Q9ULG1 1556 aaPredicted RBP33.32■■■□□ 2.92
PAXBP1-208ENST00000472588 ATP7AQ04656 1500 aa33.31■■■□□ 2.92
PAXBP1-208ENST00000472588 ZFYVE16Q7Z3T8 1539 aa33.3■■■□□ 2.92
PAXBP1-208ENST00000472588 MLH3Q9UHC1 1453 aa33.3■■■□□ 2.92
PAXBP1-208ENST00000472588 MYT1LQ9UL68 1186 aa33.29■■■□□ 2.92
PAXBP1-208ENST00000472588 HECW2Q9P2P5 1572 aa33.28■■■□□ 2.92
PAXBP1-208ENST00000472588 KIF15Q9NS87 1388 aa33.26■■■□□ 2.92
PAXBP1-208ENST00000472588 ACIN1Q9UKV3 1341 aaKnown RBP33.26■■■□□ 2.91
PAXBP1-208ENST00000472588 HRCP23327 699 aa33.26■■■□□ 2.91
PAXBP1-208ENST00000472588 ZMYM4Q5VZL5 1548 aa33.24■■■□□ 2.91
PAXBP1-208ENST00000472588 KIDINS220Q9ULH0 1771 aa33.24■■■□□ 2.91
PAXBP1-208ENST00000472588 RAB3GAP2Q9H2M9 1393 aa33.23■■■□□ 2.91
PAXBP1-208ENST00000472588 MAGI2Q86UL8 1455 aa33.22■■■□□ 2.91
PAXBP1-208ENST00000472588 DUOX2Q9NRD8 1548 aa33.21■■■□□ 2.91
PAXBP1-208ENST00000472588 ANKRD50Q9ULJ7 1429 aa33.18■■■□□ 2.9
PAXBP1-208ENST00000472588 ARHGEF40Q8TER5 1519 aa33.13■■■□□ 2.89
PAXBP1-208ENST00000472588 ERBINQ96RT1 1412 aa33.13■■■□□ 2.89
PAXBP1-208ENST00000472588 ABCA6Q8N139 1617 aa33.09■■■□□ 2.89
PAXBP1-208ENST00000472588 DHX29Q7Z478 1369 aaKnown RBP33.08■■■□□ 2.89
PAXBP1-208ENST00000472588 DIP2CQ9Y2E4 1556 aa33.06■■■□□ 2.88
PAXBP1-208ENST00000472588 A2MP01023 1474 aa33.06■■■□□ 2.88
PAXBP1-208ENST00000472588 YEATS2Q9ULM3 1422 aa33.06■■■□□ 2.88
PAXBP1-208ENST00000472588 EIF2AK4Q9P2K8 1649 aaKnown RBP33.04■■■□□ 2.88
PAXBP1-208ENST00000472588 ATP10AO60312 1499 aa33■■■□□ 2.87
PAXBP1-208ENST00000472588 TRIM52Q96A61 297 aa32.98■■■□□ 2.87
PAXBP1-208ENST00000472588 REREQ9P2R6 1566 aa32.98■■■□□ 2.87
PAXBP1-208ENST00000472588 BCORL1Q5H9F3 1711 aa32.93■■■□□ 2.86
PAXBP1-208ENST00000472588 UNC13BO14795 1591 aa32.93■■■□□ 2.86
PAXBP1-208ENST00000472588 KDM4FA0A1W2PPD8 638 aa32.93■■■□□ 2.86
PAXBP1-208ENST00000472588 SIGLEC1Q9BZZ2 1709 aa32.92■■■□□ 2.86
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms