RNA–Protein interactions for RNA: ENST00000471682.1

COMMD6-208, Transcript of COMM domain containing 6, humanhuman

TSL 3

Gene COMMD6, Length 447 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD6-208ENST00000471682 FANCAO15360 1455 aa23.78■■□□□ 1.4
COMMD6-208ENST00000471682 CDC42BPAQ5VT25 1732 aa23.76■■□□□ 1.39
COMMD6-208ENST00000471682 ARHGAP5Q13017 1502 aa23.74■■□□□ 1.39
COMMD6-208ENST00000471682 ITSN2Q9NZM3 1697 aa23.73■■□□□ 1.39
COMMD6-208ENST00000471682 CDC42BPBQ9Y5S2 1711 aa23.73■■□□□ 1.39
COMMD6-208ENST00000471682 AKNAQ7Z591 1439 aa23.72■■□□□ 1.39
COMMD6-208ENST00000471682 CFDP1Q9UEE9 299 aaPredicted RBP23.71■■□□□ 1.39
COMMD6-208ENST00000471682 MYOM3Q5VTT5 1437 aa23.68■■□□□ 1.38
COMMD6-208ENST00000471682 MIA2Q96PC5 1412 aa23.67■■□□□ 1.38
COMMD6-208ENST00000471682 KDM6BO15054 1643 aa23.66■■□□□ 1.38
COMMD6-208ENST00000471682 ADGRL1O94910 1474 aa23.66■■□□□ 1.38
COMMD6-208ENST00000471682 PLEKHH2Q8IVE3 1493 aa23.66■■□□□ 1.38
COMMD6-208ENST00000471682 COL17A1Q9UMD9 1497 aaPredicted RBP23.64■■□□□ 1.38
COMMD6-208ENST00000471682 KIAA1107Q9UPP5 1409 aa23.64■■□□□ 1.37
COMMD6-208ENST00000471682 DENND4BO75064 1496 aaPredicted RBP23.62■■□□□ 1.37
COMMD6-208ENST00000471682 SCAPERQ9BY12 1400 aa23.61■■□□□ 1.37
COMMD6-208ENST00000471682 ABCC1P33527 1531 aa23.61■■□□□ 1.37
COMMD6-208ENST00000471682 SAMD9LQ8IVG5 1584 aa23.61■■□□□ 1.37
COMMD6-208ENST00000471682 ZNF777Q9ULD5 760 aaPredicted RBP23.59■■□□□ 1.37
COMMD6-208ENST00000471682 FGD6Q6ZV73 1430 aa23.57■■□□□ 1.36
COMMD6-208ENST00000471682 POGZQ7Z3K3 1410 aa23.57■■□□□ 1.36
COMMD6-208ENST00000471682 RSPH4AQ5TD94 716 aa23.56■■□□□ 1.36
COMMD6-208ENST00000471682 ZNF518AQ6AHZ1 1483 aa23.56■■□□□ 1.36
COMMD6-208ENST00000471682 CAMSAP2Q08AD1 1489 aa23.55■■□□□ 1.36
COMMD6-208ENST00000471682 ARHGEF12Q9NZN5 1544 aa23.54■■□□□ 1.36
COMMD6-208ENST00000471682 RICTORQ6R327 1708 aa23.54■■□□□ 1.36
COMMD6-208ENST00000471682 RAPGEF3O95398 923 aa23.53■■□□□ 1.36
COMMD6-208ENST00000471682 ZNF644Q9H582 1327 aaPredicted RBP23.53■■□□□ 1.36
COMMD6-208ENST00000471682 FRMPD1Q5SYB0 1578 aa23.52■■□□□ 1.36
COMMD6-208ENST00000471682 TCOF1Q13428 1488 aaKnown RBP23.52■■□□□ 1.36
COMMD6-208ENST00000471682 MBD5Q9P267 1494 aa23.52■■□□□ 1.36
COMMD6-208ENST00000471682 PPARGC1BQ86YN6 1023 aaKnown RBP23.52■■□□□ 1.36
COMMD6-208ENST00000471682 ZMYM4Q5VZL5 1548 aa23.52■■□□□ 1.36
COMMD6-208ENST00000471682 SYCP2Q9BX26 1530 aa23.52■■□□□ 1.36
COMMD6-208ENST00000471682 MAGI2Q86UL8 1455 aa23.5■■□□□ 1.35
COMMD6-208ENST00000471682 KDM5CP41229 1560 aa23.5■■□□□ 1.35
COMMD6-208ENST00000471682 PTPN23Q9H3S7 1636 aa23.5■■□□□ 1.35
COMMD6-208ENST00000471682 TRAPPC8Q9Y2L5 1435 aa23.5■■□□□ 1.35
COMMD6-208ENST00000471682 HNRNPMP52272 730 aaKnown RBP eCLIP23.49■■□□□ 1.35
COMMD6-208ENST00000471682 ARHGEF5Q12774 1597 aa23.48■■□□□ 1.35
COMMD6-208ENST00000471682 AFAP1Q8N556 730 aa23.48■■□□□ 1.35
COMMD6-208ENST00000471682 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.46■■□□□ 1.35
COMMD6-208ENST00000471682 MLH3Q9UHC1 1453 aa23.46■■□□□ 1.35
COMMD6-208ENST00000471682 CCDC141Q6ZP82 1450 aa23.44■■□□□ 1.34
COMMD6-208ENST00000471682 RRBP1Q9P2E9 1410 aaKnown RBP23.43■■□□□ 1.34
COMMD6-208ENST00000471682 HECW2Q9P2P5 1572 aa23.41■■□□□ 1.34
COMMD6-208ENST00000471682 RTEL1-TNFRSF6BF6WH68 1400 aa23.41■■□□□ 1.34
COMMD6-208ENST00000471682 SPAG9O60271 1321 aaKnown RBP23.4■■□□□ 1.34
COMMD6-208ENST00000471682 TSPY4P0CV99 314 aa23.39■■□□□ 1.33
COMMD6-208ENST00000471682 TSPY10P0CW01 314 aa23.39■■□□□ 1.33
COMMD6-208ENST00000471682 ZFYVE16Q7Z3T8 1539 aa23.38■■□□□ 1.33
COMMD6-208ENST00000471682 FAM50AQ14320 339 aaKnown RBP23.37■■□□□ 1.33
COMMD6-208ENST00000471682 ARHGEF40Q8TER5 1519 aa23.37■■□□□ 1.33
COMMD6-208ENST00000471682 DNMT1P26358 1616 aaKnown RBP23.37■■□□□ 1.33
COMMD6-208ENST00000471682 ABCC5O15440 1437 aa23.36■■□□□ 1.33
COMMD6-208ENST00000471682 SHANK2Q9UPX8 1470 aa23.36■■□□□ 1.33
COMMD6-208ENST00000471682 INO80Q9ULG1 1556 aaPredicted RBP23.35■■□□□ 1.33
COMMD6-208ENST00000471682 MAST1Q9Y2H9 1570 aa23.35■■□□□ 1.33
COMMD6-208ENST00000471682 DAPK1P53355 1430 aa23.34■■□□□ 1.33
COMMD6-208ENST00000471682 ATP7AQ04656 1500 aa23.34■■□□□ 1.33
COMMD6-208ENST00000471682 KIDINS220Q9ULH0 1771 aa23.34■■□□□ 1.33
COMMD6-208ENST00000471682 YEATS2Q9ULM3 1422 aa23.33■■□□□ 1.33
COMMD6-208ENST00000471682 ATP10AO60312 1499 aa23.32■■□□□ 1.32
COMMD6-208ENST00000471682 MYT1LQ9UL68 1186 aa23.32■■□□□ 1.32
COMMD6-208ENST00000471682 C9orf84Q5VXU9 1444 aa23.31■■□□□ 1.32
COMMD6-208ENST00000471682 CROCC2H7BZ55 1655 aa23.3■■□□□ 1.32
COMMD6-208ENST00000471682 REREQ9P2R6 1566 aa23.3■■□□□ 1.32
COMMD6-208ENST00000471682 DIP2CQ9Y2E4 1556 aa23.29■■□□□ 1.32
COMMD6-208ENST00000471682 ABCA6Q8N139 1617 aa23.27■■□□□ 1.32
COMMD6-208ENST00000471682 PLXNC1O60486 1568 aa23.25■■□□□ 1.31
COMMD6-208ENST00000471682 ADGBQ8N7X0 1667 aa23.24■■□□□ 1.31
COMMD6-208ENST00000471682 ADGRL2O95490 1459 aa23.24■■□□□ 1.31
COMMD6-208ENST00000471682 ANKRD30AQ9BXX3 1397 aa23.23■■□□□ 1.31
COMMD6-208ENST00000471682 A2MP01023 1474 aa23.22■■□□□ 1.31
COMMD6-208ENST00000471682 AGLP35573 1532 aa23.22■■□□□ 1.31
COMMD6-208ENST00000471682 ROCK1Q13464 1354 aa23.21■■□□□ 1.31
COMMD6-208ENST00000471682 DHX29Q7Z478 1369 aaKnown RBP23.21■■□□□ 1.31
COMMD6-208ENST00000471682 NCOA1Q15788 1441 aa23.21■■□□□ 1.31
COMMD6-208ENST00000471682 PTPRKQ15262 1439 aa23.2■■□□□ 1.3
COMMD6-208ENST00000471682 DUOX2Q9NRD8 1548 aa23.17■■□□□ 1.3
COMMD6-208ENST00000471682 KIF15Q9NS87 1388 aa23.16■■□□□ 1.3
COMMD6-208ENST00000471682 CHIC2Q9UKJ5 165 aa23.16■■□□□ 1.3
COMMD6-208ENST00000471682 ARID4BQ4LE39 1312 aaPredicted RBP23.13■■□□□ 1.29
COMMD6-208ENST00000471682 ITGAEP38570 1179 aa23.12■■□□□ 1.29
COMMD6-208ENST00000471682 ERBINQ96RT1 1412 aa23.12■■□□□ 1.29
COMMD6-208ENST00000471682 RRP7BPQ9NSQ0 103 aa23.12■■□□□ 1.29
COMMD6-208ENST00000471682 BCORL1Q5H9F3 1711 aa23.11■■□□□ 1.29
COMMD6-208ENST00000471682 SIGLEC1Q9BZZ2 1709 aa23.11■■□□□ 1.29
COMMD6-208ENST00000471682 EIF2AK4Q9P2K8 1649 aaKnown RBP23.09■■□□□ 1.29
COMMD6-208ENST00000471682 PPP6R1Q9UPN7 881 aa23.08■■□□□ 1.29
COMMD6-208ENST00000471682 ANKRD50Q9ULJ7 1429 aa23.06■■□□□ 1.28
COMMD6-208ENST00000471682 KIF3BO15066 747 aa23.04■■□□□ 1.28
COMMD6-208ENST00000471682 HFM1A2PYH4 1435 aa23.03■■□□□ 1.28
COMMD6-208ENST00000471682 ADAMTSL3P82987 1691 aa23.03■■□□□ 1.28
COMMD6-208ENST00000471682 FAM135AQ9P2D6 1515 aa23.03■■□□□ 1.28
COMMD6-208ENST00000471682 RNF17Q9BXT8 1623 aaKnown RBP23.01■■□□□ 1.27
COMMD6-208ENST00000471682 NAIPQ13075 1403 aa23■■□□□ 1.27
COMMD6-208ENST00000471682 MLECQ14165 292 aa22.99■■□□□ 1.27
COMMD6-208ENST00000471682 KDM4FA0A1W2PPD8 638 aa22.98■■□□□ 1.27
COMMD6-208ENST00000471682 CNTLNQ9NXG0 1405 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms