RNA–Protein interactions for RNA: ENST00000471220.5

CD53-203, Transcript of CD53 molecule, humanhuman

TSL 2

Gene CD53, Length 657 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD53-203ENST00000471220 KCNH8Q96L42 1107 aa12.96□□□□□ -0.33
CD53-203ENST00000471220 CDK11AQ9UQ88 783 aaPredicted RBP12.96□□□□□ -0.33
CD53-203ENST00000471220 MAP3K1Q13233 1512 aa12.96□□□□□ -0.33
CD53-203ENST00000471220 TROQ12816 1431 aaPredicted RBP12.96□□□□□ -0.34
CD53-203ENST00000471220 FAM69CQ0P6D2 419 aa12.94□□□□□ -0.34
CD53-203ENST00000471220 KIF14Q15058 1648 aa12.94□□□□□ -0.34
CD53-203ENST00000471220 GLI2P10070 1586 aa12.94□□□□□ -0.34
CD53-203ENST00000471220 ABCB7O75027 752 aa12.93□□□□□ -0.34
CD53-203ENST00000471220 KANK4Q5T7N3 995 aaPredicted RBP12.92□□□□□ -0.34
CD53-203ENST00000471220 SAMD1Q6SPF0 538 aaPredicted RBP12.92□□□□□ -0.34
CD53-203ENST00000471220 EHBP1L1Q8N3D4 1523 aa12.92□□□□□ -0.34
CD53-203ENST00000471220 ABCA9Q8IUA7 1624 aa12.91□□□□□ -0.34
CD53-203ENST00000471220 LRRC9Q6ZRR7 1453 aa12.91□□□□□ -0.34
CD53-203ENST00000471220 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.91□□□□□ -0.34
CD53-203ENST00000471220 MTUS2Q5JR59 1369 aa12.91□□□□□ -0.34
CD53-203ENST00000471220 MAP3K4Q9Y6R4 1608 aa12.9□□□□□ -0.34
CD53-203ENST00000471220 TTC37Q6PGP7 1564 aa12.9□□□□□ -0.35
CD53-203ENST00000471220 TSPOAP1O95153 1857 aa12.89□□□□□ -0.35
CD53-203ENST00000471220 PPRC1Q5VV67 1664 aaKnown RBP12.87□□□□□ -0.35
CD53-203ENST00000471220 SUPT6HQ7KZ85 1726 aaKnown RBP12.86□□□□□ -0.35
CD53-203ENST00000471220 CD109Q6YHK3 1445 aa12.86□□□□□ -0.35
CD53-203ENST00000471220 MYO5CQ9NQX4 1742 aa12.85□□□□□ -0.35
CD53-203ENST00000471220 NCOA2Q15596 1464 aa12.85□□□□□ -0.35
CD53-203ENST00000471220 CDC42BPAQ5VT25 1732 aa12.84□□□□□ -0.35
CD53-203ENST00000471220 PPARGC1BQ86YN6 1023 aaKnown RBP12.83□□□□□ -0.36
CD53-203ENST00000471220 CDC42BPBQ9Y5S2 1711 aa12.82□□□□□ -0.36
CD53-203ENST00000471220 PLCH2O75038 1416 aa12.82□□□□□ -0.36
CD53-203ENST00000471220 GPATCH8Q9UKJ3 1502 aaKnown RBP12.82□□□□□ -0.36
CD53-203ENST00000471220 PREX2Q70Z35 1606 aa12.81□□□□□ -0.36
CD53-203ENST00000471220 CCNB3Q8WWL7 1395 aa12.81□□□□□ -0.36
CD53-203ENST00000471220 ARAP3Q8WWN8 1544 aa12.79□□□□□ -0.36
CD53-203ENST00000471220 TEX14Q8IWB6 1497 aa12.78□□□□□ -0.36
CD53-203ENST00000471220 ARHGAP5Q13017 1502 aa12.78□□□□□ -0.36
CD53-203ENST00000471220 ITSN2Q9NZM3 1697 aa12.78□□□□□ -0.36
CD53-203ENST00000471220 POTEHQ6S545 545 aa12.78□□□□□ -0.36
CD53-203ENST00000471220 PHLDB1Q86UU1 1377 aa12.78□□□□□ -0.36
CD53-203ENST00000471220 FANCAO15360 1455 aa12.78□□□□□ -0.36
CD53-203ENST00000471220 MYCNP04198 464 aaPredicted RBP12.76□□□□□ -0.37
CD53-203ENST00000471220 NEO1Q92859 1461 aa12.76□□□□□ -0.37
CD53-203ENST00000471220 CFAP74Q9C0B2 1584 aa12.76□□□□□ -0.37
CD53-203ENST00000471220 MYOM3Q5VTT5 1437 aa12.75□□□□□ -0.37
CD53-203ENST00000471220 EFCAB2Q5VUJ9 269 aa12.75□□□□□ -0.37
CD53-203ENST00000471220 SAMD9LQ8IVG5 1584 aa12.74□□□□□ -0.37
CD53-203ENST00000471220 AKNAQ7Z591 1439 aa12.74□□□□□ -0.37
CD53-203ENST00000471220 CFDP1Q9UEE9 299 aaPredicted RBP12.74□□□□□ -0.37
CD53-203ENST00000471220 COL17A1Q9UMD9 1497 aaPredicted RBP12.73□□□□□ -0.37
CD53-203ENST00000471220 ZNF644Q9H582 1327 aaPredicted RBP12.72□□□□□ -0.37
CD53-203ENST00000471220 ZNF777Q9ULD5 760 aaPredicted RBP12.72□□□□□ -0.37
CD53-203ENST00000471220 ADGRL1O94910 1474 aa12.72□□□□□ -0.37
CD53-203ENST00000471220 FGD6Q6ZV73 1430 aa12.71□□□□□ -0.37
CD53-203ENST00000471220 MIA2Q96PC5 1412 aa12.71□□□□□ -0.37
CD53-203ENST00000471220 ABCC1P33527 1531 aa12.71□□□□□ -0.38
CD53-203ENST00000471220 CAMSAP2Q08AD1 1489 aa12.71□□□□□ -0.38
CD53-203ENST00000471220 ARHGEF12Q9NZN5 1544 aa12.7□□□□□ -0.38
CD53-203ENST00000471220 SCAPERQ9BY12 1400 aa12.7□□□□□ -0.38
CD53-203ENST00000471220 KDM6BO15054 1643 aa12.7□□□□□ -0.38
CD53-203ENST00000471220 PTPN23Q9H3S7 1636 aa12.7□□□□□ -0.38
CD53-203ENST00000471220 RICTORQ6R327 1708 aa12.69□□□□□ -0.38
CD53-203ENST00000471220 SYCP2Q9BX26 1530 aa12.68□□□□□ -0.38
CD53-203ENST00000471220 FRMPD1Q5SYB0 1578 aa12.68□□□□□ -0.38
CD53-203ENST00000471220 DENND4BO75064 1496 aaPredicted RBP12.67□□□□□ -0.38
CD53-203ENST00000471220 TCOF1Q13428 1488 aaKnown RBP12.67□□□□□ -0.38
CD53-203ENST00000471220 PLEKHH2Q8IVE3 1493 aa12.67□□□□□ -0.38
CD53-203ENST00000471220 SLC4A1APQ9BWU0 796 aaKnown RBP12.67□□□□□ -0.38
CD53-203ENST00000471220 KIAA1107Q9UPP5 1409 aa12.67□□□□□ -0.38
CD53-203ENST00000471220 MBD5Q9P267 1494 aa12.66□□□□□ -0.38
CD53-203ENST00000471220 POGZQ7Z3K3 1410 aa12.66□□□□□ -0.38
CD53-203ENST00000471220 TRAPPC8Q9Y2L5 1435 aa12.66□□□□□ -0.38
CD53-203ENST00000471220 RAPGEF3O95398 923 aa12.66□□□□□ -0.38
CD53-203ENST00000471220 HNRNPMP52272 730 aaKnown RBP eCLIP12.66□□□□□ -0.38
CD53-203ENST00000471220 AFAP1Q8N556 730 aa12.64□□□□□ -0.39
CD53-203ENST00000471220 ARHGEF5Q12774 1597 aa12.64□□□□□ -0.39
CD53-203ENST00000471220 RRBP1Q9P2E9 1410 aaKnown RBP12.63□□□□□ -0.39
CD53-203ENST00000471220 POLA2Q14181 598 aa12.63□□□□□ -0.39
CD53-203ENST00000471220 ZNF518AQ6AHZ1 1483 aa12.63□□□□□ -0.39
CD53-203ENST00000471220 KDM5CP41229 1560 aa12.63□□□□□ -0.39
CD53-203ENST00000471220 FAM50AQ14320 339 aaKnown RBP12.62□□□□□ -0.39
CD53-203ENST00000471220 ZMYM4Q5VZL5 1548 aa12.62□□□□□ -0.39
CD53-203ENST00000471220 CCDC141Q6ZP82 1450 aa12.61□□□□□ -0.39
CD53-203ENST00000471220 RBM42Q9BTD8 480 aaKnown RBP12.61□□□□□ -0.39
CD53-203ENST00000471220 DNMT1P26358 1616 aaKnown RBP12.6□□□□□ -0.39
CD53-203ENST00000471220 ABCC5O15440 1437 aa12.6□□□□□ -0.39
CD53-203ENST00000471220 CROCC2H7BZ55 1655 aa12.6□□□□□ -0.39
CD53-203ENST00000471220 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.59□□□□□ -0.39
CD53-203ENST00000471220 RSPH4AQ5TD94 716 aa12.59□□□□□ -0.39
CD53-203ENST00000471220 HECW2Q9P2P5 1572 aa12.59□□□□□ -0.39
CD53-203ENST00000471220 KIDINS220Q9ULH0 1771 aa12.58□□□□□ -0.39
CD53-203ENST00000471220 DAPK1P53355 1430 aa12.58□□□□□ -0.4
CD53-203ENST00000471220 INO80Q9ULG1 1556 aaPredicted RBP12.58□□□□□ -0.4
CD53-203ENST00000471220 MLH3Q9UHC1 1453 aa12.58□□□□□ -0.4
CD53-203ENST00000471220 SPAG9O60271 1321 aaKnown RBP12.58□□□□□ -0.4
CD53-203ENST00000471220 ZFYVE16Q7Z3T8 1539 aa12.57□□□□□ -0.4
CD53-203ENST00000471220 YEATS2Q9ULM3 1422 aa12.57□□□□□ -0.4
CD53-203ENST00000471220 MAGI2Q86UL8 1455 aa12.57□□□□□ -0.4
CD53-203ENST00000471220 ATP7AQ04656 1500 aa12.57□□□□□ -0.4
CD53-203ENST00000471220 MAST1Q9Y2H9 1570 aa12.56□□□□□ -0.4
CD53-203ENST00000471220 PTPRKQ15262 1439 aa12.56□□□□□ -0.4
CD53-203ENST00000471220 C9orf84Q5VXU9 1444 aa12.56□□□□□ -0.4
CD53-203ENST00000471220 FOXD4L1Q9NU39 408 aa12.56□□□□□ -0.4
CD53-203ENST00000471220 ABCA6Q8N139 1617 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 1603.2 ms