RNA–Protein interactions for RNA: ENST00000470744.5

CLTA-207, Transcript of clathrin light chain A, humanhuman

TSL 2 BASIC

Gene CLTA, Length 1,102 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-207ENST00000470744 MTUS2Q5JR59 1369 aa40.31■■■■■ 4.04
CLTA-207ENST00000470744 VPS8Q8N3P4 1428 aa40.3■■■■■ 4.04
CLTA-207ENST00000470744 POGZQ7Z3K3 1410 aa40.26■■■■■ 4.04
CLTA-207ENST00000470744 PREX2Q70Z35 1606 aa40.26■■■■■ 4.04
CLTA-207ENST00000470744 CDC42BPBQ9Y5S2 1711 aa40.24■■■■■ 4.03
CLTA-207ENST00000470744 ZMYM4Q5VZL5 1548 aa40.21■■■■■ 4.03
CLTA-207ENST00000470744 EHBP1L1Q8N3D4 1523 aa40.18■■■■■ 4.02
CLTA-207ENST00000470744 CDC42BPAQ5VT25 1732 aa40.18■■■■■ 4.02
CLTA-207ENST00000470744 ARHGEF40Q8TER5 1519 aa40.17■■■■■ 4.02
CLTA-207ENST00000470744 GPATCH8Q9UKJ3 1502 aaKnown RBP40.17■■■■■ 4.02
CLTA-207ENST00000470744 MAGI2Q86UL8 1455 aa40.13■■■■■ 4.02
CLTA-207ENST00000470744 CCNB3Q8WWL7 1395 aa40.13■■■■■ 4.02
CLTA-207ENST00000470744 ZFYVE16Q7Z3T8 1539 aa40.12■■■■■ 4.01
CLTA-207ENST00000470744 YEATS2Q9ULM3 1422 aa40.11■■■■■ 4.01
CLTA-207ENST00000470744 ZNF518AQ6AHZ1 1483 aa40.11■■■■■ 4.01
CLTA-207ENST00000470744 TIAM1Q13009 1591 aa40.1■■■■■ 4.01
CLTA-207ENST00000470744 AFAP1Q8N556 730 aa40.1■■■■■ 4.01
CLTA-207ENST00000470744 ZNF777Q9ULD5 760 aaPredicted RBP40.09■■■■■ 4.01
CLTA-207ENST00000470744 ABCC1P33527 1531 aa40.09■■■■■ 4.01
CLTA-207ENST00000470744 ARID4BQ4LE39 1312 aaPredicted RBP40.06■■■■■ 4
CLTA-207ENST00000470744 ARHGEF12Q9NZN5 1544 aa40.06■■■■■ 4
CLTA-207ENST00000470744 CFDP1Q9UEE9 299 aaPredicted RBP40.05■■■■■ 4
CLTA-207ENST00000470744 TRAPPC8Q9Y2L5 1435 aa40.02■■■■■ 4
CLTA-207ENST00000470744 KDM5CP41229 1560 aa40.01■■■■■ 4
CLTA-207ENST00000470744 SAMD9LQ8IVG5 1584 aa40.01■■■■□ 3.99
CLTA-207ENST00000470744 ITSN2Q9NZM3 1697 aa39.99■■■■□ 3.99
CLTA-207ENST00000470744 MYT1LQ9UL68 1186 aa39.97■■■■□ 3.99
CLTA-207ENST00000470744 NCOA2Q15596 1464 aa39.96■■■■□ 3.99
CLTA-207ENST00000470744 LRRC9Q6ZRR7 1453 aa39.95■■■■□ 3.99
CLTA-207ENST00000470744 MAP3K1Q13233 1512 aa39.95■■■■□ 3.99
CLTA-207ENST00000470744 SUPT6HQ7KZ85 1726 aaKnown RBP39.94■■■■□ 3.98
CLTA-207ENST00000470744 ATP10AO60312 1499 aa39.93■■■■□ 3.98
CLTA-207ENST00000470744 SYCP2Q9BX26 1530 aa39.92■■■■□ 3.98
CLTA-207ENST00000470744 HECW2Q9P2P5 1572 aa39.92■■■■□ 3.98
CLTA-207ENST00000470744 PLEKHH2Q8IVE3 1493 aa39.9■■■■□ 3.98
CLTA-207ENST00000470744 MLH3Q9UHC1 1453 aa39.9■■■■□ 3.98
CLTA-207ENST00000470744 HNRNPMP52272 730 aaKnown RBP eCLIP39.9■■■■□ 3.98
CLTA-207ENST00000470744 BCORL1Q5H9F3 1711 aa39.9■■■■□ 3.98
CLTA-207ENST00000470744 KIAA1107Q9UPP5 1409 aa39.9■■■■□ 3.98
CLTA-207ENST00000470744 KANK4Q5T7N3 995 aaPredicted RBP39.89■■■■□ 3.98
CLTA-207ENST00000470744 C9orf84Q5VXU9 1444 aa39.89■■■■□ 3.98
CLTA-207ENST00000470744 ADAMTSL3P82987 1691 aa39.89■■■■□ 3.98
CLTA-207ENST00000470744 SIGLEC1Q9BZZ2 1709 aa39.85■■■■□ 3.97
CLTA-207ENST00000470744 ZNF644Q9H582 1327 aaPredicted RBP39.85■■■■□ 3.97
CLTA-207ENST00000470744 APLP2Q06481 763 aa39.83■■■■□ 3.97
CLTA-207ENST00000470744 DIP2CQ9Y2E4 1556 aa39.81■■■■□ 3.96
CLTA-207ENST00000470744 SPAG9O60271 1321 aaKnown RBP39.78■■■■□ 3.96
CLTA-207ENST00000470744 MLECQ14165 292 aa39.78■■■■□ 3.96
CLTA-207ENST00000470744 ABCA6Q8N139 1617 aa39.78■■■■□ 3.96
CLTA-207ENST00000470744 MADDQ8WXG6 1647 aa39.78■■■■□ 3.96
CLTA-207ENST00000470744 PTPRMP28827 1452 aa39.75■■■■□ 3.95
CLTA-207ENST00000470744 KIDINS220Q9ULH0 1771 aa39.74■■■■□ 3.95
CLTA-207ENST00000470744 MBD5Q9P267 1494 aa39.71■■■■□ 3.95
CLTA-207ENST00000470744 REREQ9P2R6 1566 aa39.71■■■■□ 3.95
CLTA-207ENST00000470744 CAMSAP2Q08AD1 1489 aa39.68■■■■□ 3.94
CLTA-207ENST00000470744 ATP7AQ04656 1500 aa39.65■■■■□ 3.94
CLTA-207ENST00000470744 RIMS1Q86UR5 1692 aaKnown RBP39.64■■■■□ 3.94
CLTA-207ENST00000470744 INO80Q9ULG1 1556 aaPredicted RBP39.63■■■■□ 3.93
CLTA-207ENST00000470744 MYOM3Q5VTT5 1437 aa39.6■■■■□ 3.93
CLTA-207ENST00000470744 AGLP35573 1532 aa39.6■■■■□ 3.93
CLTA-207ENST00000470744 CCDC141Q6ZP82 1450 aa39.57■■■■□ 3.93
CLTA-207ENST00000470744 RSPH4AQ5TD94 716 aa39.55■■■■□ 3.92
CLTA-207ENST00000470744 MIA2Q96PC5 1412 aa39.55■■■■□ 3.92
CLTA-207ENST00000470744 FER1L4A9Z1Z3 1794 aa39.54■■■■□ 3.92
CLTA-207ENST00000470744 PLPPR3Q6T4P5 718 aa39.52■■■■□ 3.92
CLTA-207ENST00000470744 RTEL1-TNFRSF6BF6WH68 1400 aa39.51■■■■□ 3.92
CLTA-207ENST00000470744 A2MP01023 1474 aa39.5■■■■□ 3.91
CLTA-207ENST00000470744 ARHGEF5Q12774 1597 aa39.49■■■■□ 3.91
CLTA-207ENST00000470744 PLXNC1O60486 1568 aa39.44■■■■□ 3.9
CLTA-207ENST00000470744 TSPY4P0CV99 314 aa39.43■■■■□ 3.9
CLTA-207ENST00000470744 TSPY10P0CW01 314 aa39.43■■■■□ 3.9
CLTA-207ENST00000470744 ADGBQ8N7X0 1667 aa39.4■■■■□ 3.9
CLTA-207ENST00000470744 ESF1Q9H501 851 aaKnown RBP39.38■■■■□ 3.89
CLTA-207ENST00000470744 CEBPAP49715 358 aaPredicted RBP39.35■■■■□ 3.89
CLTA-207ENST00000470744 DHX29Q7Z478 1369 aaKnown RBP39.34■■■■□ 3.89
CLTA-207ENST00000470744 FGD6Q6ZV73 1430 aa39.34■■■■□ 3.89
CLTA-207ENST00000470744 PTPN23Q9H3S7 1636 aa39.33■■■■□ 3.89
CLTA-207ENST00000470744 CNTLNQ9NXG0 1405 aa39.29■■■■□ 3.88
CLTA-207ENST00000470744 GGT6Q6P531 493 aa39.28■■■■□ 3.88
CLTA-207ENST00000470744 MAST1Q9Y2H9 1570 aa39.28■■■■□ 3.88
CLTA-207ENST00000470744 TCOF1Q13428 1488 aaKnown RBP39.26■■■■□ 3.88
CLTA-207ENST00000470744 LMTK3Q96Q04 1460 aa39.25■■■■□ 3.87
CLTA-207ENST00000470744 ABCC5O15440 1437 aa39.22■■■■□ 3.87
CLTA-207ENST00000470744 KIF3BO15066 747 aa39.2■■■■□ 3.87
CLTA-207ENST00000470744 C3P01024 1663 aa39.18■■■■□ 3.86
CLTA-207ENST00000470744 DAPK1P53355 1430 aa39.16■■■■□ 3.86
CLTA-207ENST00000470744 PPP6R1Q9UPN7 881 aa39.16■■■■□ 3.86
CLTA-207ENST00000470744 SHANK2Q9UPX8 1470 aa39.15■■■■□ 3.86
CLTA-207ENST00000470744 ZMYM3Q14202 1370 aa39.14■■■■□ 3.86
CLTA-207ENST00000470744 DNMT1P26358 1616 aaKnown RBP39.13■■■■□ 3.85
CLTA-207ENST00000470744 MROH2AA6NES4 1674 aa39.12■■■■□ 3.85
CLTA-207ENST00000470744 CLTCQ00610 1675 aaKnown RBP39.12■■■■□ 3.85
CLTA-207ENST00000470744 CROCC2H7BZ55 1655 aa39.11■■■■□ 3.85
CLTA-207ENST00000470744 PPARGC1BQ86YN6 1023 aaKnown RBP39.11■■■■□ 3.85
CLTA-207ENST00000470744 HSPA2P54652 639 aa39.1■■■■□ 3.85
CLTA-207ENST00000470744 FAM50AQ14320 339 aaKnown RBP39.1■■■■□ 3.85
CLTA-207ENST00000470744 PREX1Q8TCU6 1659 aa39.06■■■■□ 3.84
CLTA-207ENST00000470744 KIF15Q9NS87 1388 aa39.05■■■■□ 3.84
CLTA-207ENST00000470744 UHRF1BP1Q6BDS2 1440 aa39.04■■■■□ 3.84
CLTA-207ENST00000470744 RRP7BPQ9NSQ0 103 aa39.03■■■■□ 3.84
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms