RNA–Protein interactions for RNA: ENST00000470161.6

PCGF3-208, Transcript of polycomb group ring finger 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCGF3, Length 1,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3-208ENST00000470161 ADGRL1O94910 1474 aa30.33■■■□□ 2.45
PCGF3-208ENST00000470161 MAP3K1Q13233 1512 aa30.31■■■□□ 2.44
PCGF3-208ENST00000470161 SCAPERQ9BY12 1400 aa30.3■■■□□ 2.44
PCGF3-208ENST00000470161 ZNF777Q9ULD5 760 aaPredicted RBP30.29■■■□□ 2.44
PCGF3-208ENST00000470161 PREX2Q70Z35 1606 aa30.29■■■□□ 2.44
PCGF3-208ENST00000470161 LRRC9Q6ZRR7 1453 aa30.28■■■□□ 2.44
PCGF3-208ENST00000470161 CFDP1Q9UEE9 299 aaPredicted RBP30.28■■■□□ 2.44
PCGF3-208ENST00000470161 CDC42BPBQ9Y5S2 1711 aa30.27■■■□□ 2.44
PCGF3-208ENST00000470161 GPATCH8Q9UKJ3 1502 aaKnown RBP30.27■■■□□ 2.44
PCGF3-208ENST00000470161 CDC42BPAQ5VT25 1732 aa30.25■■■□□ 2.43
PCGF3-208ENST00000470161 KANK4Q5T7N3 995 aaPredicted RBP30.25■■■□□ 2.43
PCGF3-208ENST00000470161 SUPT6HQ7KZ85 1726 aaKnown RBP30.24■■■□□ 2.43
PCGF3-208ENST00000470161 NCOA2Q15596 1464 aa30.21■■■□□ 2.43
PCGF3-208ENST00000470161 POGZQ7Z3K3 1410 aa30.18■■■□□ 2.42
PCGF3-208ENST00000470161 FRMPD1Q5SYB0 1578 aa30.18■■■□□ 2.42
PCGF3-208ENST00000470161 RICTORQ6R327 1708 aa30.17■■■□□ 2.42
PCGF3-208ENST00000470161 MYT1LQ9UL68 1186 aa30.16■■■□□ 2.42
PCGF3-208ENST00000470161 AFAP1Q8N556 730 aa30.15■■■□□ 2.42
PCGF3-208ENST00000470161 ZNF518AQ6AHZ1 1483 aa30.15■■■□□ 2.42
PCGF3-208ENST00000470161 ITSN2Q9NZM3 1697 aa30.14■■■□□ 2.42
PCGF3-208ENST00000470161 ABCC1P33527 1531 aa30.11■■■□□ 2.41
PCGF3-208ENST00000470161 HNRNPMP52272 730 aaKnown RBP eCLIP30.1■■■□□ 2.417e-7■■■■■ 38.1
PCGF3-208ENST00000470161 PLEKHH2Q8IVE3 1493 aa30.1■■■□□ 2.41
PCGF3-208ENST00000470161 MAGI2Q86UL8 1455 aa30.09■■■□□ 2.41
PCGF3-208ENST00000470161 ZMYM4Q5VZL5 1548 aa30.09■■■□□ 2.41
PCGF3-208ENST00000470161 SAMD9LQ8IVG5 1584 aa30.09■■■□□ 2.41
PCGF3-208ENST00000470161 ARHGEF12Q9NZN5 1544 aa30.06■■■□□ 2.4
PCGF3-208ENST00000470161 KIAA1107Q9UPP5 1409 aa30.06■■■□□ 2.4
PCGF3-208ENST00000470161 TRAPPC8Q9Y2L5 1435 aa30.06■■■□□ 2.4
PCGF3-208ENST00000470161 ZNF644Q9H582 1327 aaPredicted RBP30.05■■■□□ 2.4
PCGF3-208ENST00000470161 ZFYVE16Q7Z3T8 1539 aa30.04■■■□□ 2.4
PCGF3-208ENST00000470161 SYCP2Q9BX26 1530 aa30.04■■■□□ 2.4
PCGF3-208ENST00000470161 AEBP2Q6ZN18 517 aaPredicted RBP30.04■■■□□ 2.4
PCGF3-208ENST00000470161 ARID4BQ4LE39 1312 aaPredicted RBP30.04■■■□□ 2.4
PCGF3-208ENST00000470161 ARHGEF40Q8TER5 1519 aa30.02■■■□□ 2.4
PCGF3-208ENST00000470161 YEATS2Q9ULM3 1422 aa30.01■■■□□ 2.4
PCGF3-208ENST00000470161 KDM5CP41229 1560 aa30■■■□□ 2.39
PCGF3-208ENST00000470161 MYOM3Q5VTT5 1437 aa29.99■■■□□ 2.39
PCGF3-208ENST00000470161 SPAG9O60271 1321 aaKnown RBP29.97■■■□□ 2.39
PCGF3-208ENST00000470161 KDM4FA0A1W2PPD8 638 aa29.97■■■□□ 2.39
PCGF3-208ENST00000470161 HECW2Q9P2P5 1572 aa29.96■■■□□ 2.39
PCGF3-208ENST00000470161 MLH3Q9UHC1 1453 aa29.96■■■□□ 2.39
PCGF3-208ENST00000470161 CAMSAP2Q08AD1 1489 aa29.95■■■□□ 2.39
PCGF3-208ENST00000470161 MIA2Q96PC5 1412 aa29.95■■■□□ 2.38
PCGF3-208ENST00000470161 RSPH4AQ5TD94 716 aa29.94■■■□□ 2.38
PCGF3-208ENST00000470161 ATP10AO60312 1499 aa29.93■■■□□ 2.38
PCGF3-208ENST00000470161 MBD5Q9P267 1494 aa29.9■■■□□ 2.38
PCGF3-208ENST00000470161 C9orf84Q5VXU9 1444 aa29.89■■■□□ 2.38
PCGF3-208ENST00000470161 PPARGC1BQ86YN6 1023 aaKnown RBP29.87■■■□□ 2.37
PCGF3-208ENST00000470161 TSPY4P0CV99 314 aa29.86■■■□□ 2.37
PCGF3-208ENST00000470161 TSPY10P0CW01 314 aa29.86■■■□□ 2.37
PCGF3-208ENST00000470161 CCDC141Q6ZP82 1450 aa29.85■■■□□ 2.37
PCGF3-208ENST00000470161 DIP2CQ9Y2E4 1556 aa29.83■■■□□ 2.37
PCGF3-208ENST00000470161 KIDINS220Q9ULH0 1771 aa29.83■■■□□ 2.37
PCGF3-208ENST00000470161 MLECQ14165 292 aa29.82■■■□□ 2.36
PCGF3-208ENST00000470161 ATP7AQ04656 1500 aa29.82■■■□□ 2.36
PCGF3-208ENST00000470161 FGD6Q6ZV73 1430 aa29.82■■■□□ 2.36
PCGF3-208ENST00000470161 ABCA6Q8N139 1617 aa29.81■■■□□ 2.36
PCGF3-208ENST00000470161 ARHGEF5Q12774 1597 aa29.79■■■□□ 2.36
PCGF3-208ENST00000470161 PTPN23Q9H3S7 1636 aa29.78■■■□□ 2.36
PCGF3-208ENST00000470161 RTEL1-TNFRSF6BF6WH68 1400 aa29.78■■■□□ 2.36
PCGF3-208ENST00000470161 INO80Q9ULG1 1556 aaPredicted RBP29.76■■■□□ 2.36
PCGF3-208ENST00000470161 BCORL1Q5H9F3 1711 aa29.76■■■□□ 2.35
PCGF3-208ENST00000470161 FAM50AQ14320 339 aaKnown RBP29.74■■■□□ 2.35
PCGF3-208ENST00000470161 REREQ9P2R6 1566 aa29.74■■■□□ 2.35
PCGF3-208ENST00000470161 SIGLEC1Q9BZZ2 1709 aa29.72■■■□□ 2.35
PCGF3-208ENST00000470161 A2MP01023 1474 aa29.69■■■□□ 2.34
PCGF3-208ENST00000470161 TCOF1Q13428 1488 aaKnown RBP29.69■■■□□ 2.34
PCGF3-208ENST00000470161 ADAMTSL3P82987 1691 aa29.69■■■□□ 2.34
PCGF3-208ENST00000470161 ESF1Q9H501 851 aaKnown RBP29.66■■■□□ 2.34
PCGF3-208ENST00000470161 AGLP35573 1532 aa29.66■■■□□ 2.34
PCGF3-208ENST00000470161 ADGBQ8N7X0 1667 aa29.64■■■□□ 2.34
PCGF3-208ENST00000470161 MADDQ8WXG6 1647 aa29.64■■■□□ 2.34
PCGF3-208ENST00000470161 ABCC5O15440 1437 aa29.63■■■□□ 2.33
PCGF3-208ENST00000470161 DHX29Q7Z478 1369 aaKnown RBP29.62■■■□□ 2.33
PCGF3-208ENST00000470161 DAPK1P53355 1430 aa29.62■■■□□ 2.33
PCGF3-208ENST00000470161 PTPRMP28827 1452 aa29.6■■■□□ 2.33
PCGF3-208ENST00000470161 MAST1Q9Y2H9 1570 aa29.6■■■□□ 2.33
PCGF3-208ENST00000470161 PLPPR3Q6T4P5 718 aa29.59■■■□□ 2.33
PCGF3-208ENST00000470161 DNMT1P26358 1616 aaKnown RBP29.59■■■□□ 2.33
PCGF3-208ENST00000470161 GGT6Q6P531 493 aa29.58■■■□□ 2.33
PCGF3-208ENST00000470161 CHIC2Q9UKJ5 165 aa29.58■■■□□ 2.33
PCGF3-208ENST00000470161 PLXNC1O60486 1568 aa29.58■■■□□ 2.33
PCGF3-208ENST00000470161 SHANK2Q9UPX8 1470 aa29.57■■■□□ 2.32
PCGF3-208ENST00000470161 RIMS1Q86UR5 1692 aaKnown RBP29.57■■■□□ 2.32
PCGF3-208ENST00000470161 KIF3BO15066 747 aa29.56■■■□□ 2.32
PCGF3-208ENST00000470161 FER1L4A9Z1Z3 1794 aa29.55■■■□□ 2.32
PCGF3-208ENST00000470161 RRP7BPQ9NSQ0 103 aa29.53■■■□□ 2.32
PCGF3-208ENST00000470161 CROCC2H7BZ55 1655 aa29.53■■■□□ 2.32
PCGF3-208ENST00000470161 ANKRD30AQ9BXX3 1397 aa29.51■■■□□ 2.31
PCGF3-208ENST00000470161 KIF15Q9NS87 1388 aa29.5■■■□□ 2.31
PCGF3-208ENST00000470161 PCGF6Q9BYE7 350 aa29.5■■■□□ 2.31
PCGF3-208ENST00000470161 ITGAEP38570 1179 aa29.48■■■□□ 2.31
PCGF3-208ENST00000470161 PPP6R1Q9UPN7 881 aa29.48■■■□□ 2.31
PCGF3-208ENST00000470161 CNTLNQ9NXG0 1405 aa29.46■■■□□ 2.31
PCGF3-208ENST00000470161 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.46■■■□□ 2.316e-7■■■■■ 74.7
PCGF3-208ENST00000470161 DUOX2Q9NRD8 1548 aa29.46■■■□□ 2.31
PCGF3-208ENST00000470161 CEBPAP49715 358 aaPredicted RBP29.44■■■□□ 2.3
PCGF3-208ENST00000470161 TRIM26Q12899 539 aaPredicted RBP29.43■■■□□ 2.3
PCGF3-208ENST00000470161 NCOA1Q15788 1441 aa29.42■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms