RNA–Protein interactions for RNA: ENST00000469159.1

NCSTN-212, Transcript of nicastrin, humanhuman

TSL 2

Gene NCSTN, Length 856 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-212ENST00000469159 CEBPAP49715 358 aaPredicted RBP13.86□□□□□ -0.19
NCSTN-212ENST00000469159 LTBP4Q8N2S1 1624 aa13.85□□□□□ -0.19
NCSTN-212ENST00000469159 CFAP74Q9C0B2 1584 aa13.84□□□□□ -0.19
NCSTN-212ENST00000469159 UHRF1BP1Q6BDS2 1440 aa13.84□□□□□ -0.19
NCSTN-212ENST00000469159 RAPGEF6Q8TEU7 1601 aa13.82□□□□□ -0.2
NCSTN-212ENST00000469159 HECW1Q76N89 1606 aa13.82□□□□□ -0.2
NCSTN-212ENST00000469159 NUP153P49790 1475 aaKnown RBP13.81□□□□□ -0.2
NCSTN-212ENST00000469159 PRXQ9BXM0 1461 aa13.81□□□□□ -0.2
NCSTN-212ENST00000469159 PLEKHD1A6NEE1 506 aa13.81□□□□□ -0.2
NCSTN-212ENST00000469159 ATP10AO60312 1499 aa13.8□□□□□ -0.2
NCSTN-212ENST00000469159 SETD1BQ9UPS6 1966 aaKnown RBP13.79□□□□□ -0.2
NCSTN-212ENST00000469159 C9orf84Q5VXU9 1444 aa13.79□□□□□ -0.2
NCSTN-212ENST00000469159 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.79□□□□□ -0.2
NCSTN-212ENST00000469159 SCAPERQ9BY12 1400 aa13.77□□□□□ -0.21
NCSTN-212ENST00000469159 SAMD9Q5K651 1589 aa13.76□□□□□ -0.21
NCSTN-212ENST00000469159 NCOA1Q15788 1441 aa13.73□□□□□ -0.21
NCSTN-212ENST00000469159 UBAP1LF5GYI3 381 aa13.73□□□□□ -0.21
NCSTN-212ENST00000469159 PLCH2O75038 1416 aa13.72□□□□□ -0.21
NCSTN-212ENST00000469159 TRAPPC8Q9Y2L5 1435 aa13.71□□□□□ -0.22
NCSTN-212ENST00000469159 ZNF335Q9H4Z2 1342 aaPredicted RBP13.68□□□□□ -0.22
NCSTN-212ENST00000469159 C3P01024 1663 aa13.68□□□□□ -0.22
NCSTN-212ENST00000469159 MED1Q15648 1581 aaPredicted RBP13.66□□□□□ -0.22
NCSTN-212ENST00000469159 EFCAB2Q5VUJ9 269 aa13.66□□□□□ -0.22
NCSTN-212ENST00000469159 ZNF518AQ6AHZ1 1483 aa13.66□□□□□ -0.22
NCSTN-212ENST00000469159 CAMSAP1Q5T5Y3 1602 aa13.64□□□□□ -0.23
NCSTN-212ENST00000469159 REREQ9P2R6 1566 aa13.64□□□□□ -0.23
NCSTN-212ENST00000469159 HSPA1LP34931 641 aa13.64□□□□□ -0.23
NCSTN-212ENST00000469159 AFAP1Q8N556 730 aa13.64□□□□□ -0.23
NCSTN-212ENST00000469159 ESF1Q9H501 851 aaKnown RBP13.64□□□□□ -0.23
NCSTN-212ENST00000469159 NCKAP5LQ9HCH0 1330 aa13.64□□□□□ -0.23
NCSTN-212ENST00000469159 KDM5CP41229 1560 aa13.63□□□□□ -0.23
NCSTN-212ENST00000469159 AGLP35573 1532 aa13.62□□□□□ -0.23
NCSTN-212ENST00000469159 DIP2CQ9Y2E4 1556 aa13.62□□□□□ -0.23
NCSTN-212ENST00000469159 RANGAP1P46060 587 aaPredicted RBP13.6□□□□□ -0.23
NCSTN-212ENST00000469159 PKD2Q13563 968 aa13.6□□□□□ -0.23
NCSTN-212ENST00000469159 NPATQ14207 1427 aa13.6□□□□□ -0.23
NCSTN-212ENST00000469159 CNTLNQ9NXG0 1405 aa13.6□□□□□ -0.23
NCSTN-212ENST00000469159 MYT1LQ9UL68 1186 aa13.6□□□□□ -0.23
NCSTN-212ENST00000469159 CDK13Q14004 1512 aaKnown RBP13.59□□□□□ -0.23
NCSTN-212ENST00000469159 MLH3Q9UHC1 1453 aa13.58□□□□□ -0.24
NCSTN-212ENST00000469159 MYO5CQ9NQX4 1742 aa13.57□□□□□ -0.24
NCSTN-212ENST00000469159 PIP4K2BP78356 416 aa13.57□□□□□ -0.24
NCSTN-212ENST00000469159 PHF23Q9BUL5 403 aaPredicted RBP13.57□□□□□ -0.24
NCSTN-212ENST00000469159 SCAF1Q9H7N4 1312 aaKnown RBP13.57□□□□□ -0.24
NCSTN-212ENST00000469159 ABCA6Q8N139 1617 aa13.57□□□□□ -0.24
NCSTN-212ENST00000469159 PLA2R1Q13018 1463 aa13.56□□□□□ -0.24
NCSTN-212ENST00000469159 TOM1O60784 492 aa13.56□□□□□ -0.24
NCSTN-212ENST00000469159 TCOF1Q13428 1488 aaKnown RBP13.55□□□□□ -0.24
NCSTN-212ENST00000469159 CSRNP3Q8WYN3 585 aa13.55□□□□□ -0.24
NCSTN-212ENST00000469159 ZMYM3Q14202 1370 aa13.55□□□□□ -0.24
NCSTN-212ENST00000469159 ARHGAP5Q13017 1502 aa13.54□□□□□ -0.24
NCSTN-212ENST00000469159 PPP6R1Q9UPN7 881 aa13.53□□□□□ -0.24
NCSTN-212ENST00000469159 MROH2AA6NES4 1674 aa13.52□□□□□ -0.25
NCSTN-212ENST00000469159 CDK11AQ9UQ88 783 aaPredicted RBP13.51□□□□□ -0.25
NCSTN-212ENST00000469159 ZNF142P52746 1687 aaPredicted RBP13.5□□□□□ -0.25
NCSTN-212ENST00000469159 KIF14Q15058 1648 aa13.5□□□□□ -0.25
NCSTN-212ENST00000469159 CEP170BQ9Y4F5 1589 aaPredicted RBP13.49□□□□□ -0.25
NCSTN-212ENST00000469159 CPS1P31327 1500 aa13.49□□□□□ -0.25
NCSTN-212ENST00000469159 MYO3AQ8NEV4 1616 aa13.48□□□□□ -0.25
NCSTN-212ENST00000469159 TROQ12816 1431 aaPredicted RBP13.47□□□□□ -0.25
NCSTN-212ENST00000469159 KIDINS220Q9ULH0 1771 aa13.46□□□□□ -0.25
NCSTN-212ENST00000469159 ATP1B4Q9UN42 357 aaPredicted RBP13.46□□□□□ -0.25
NCSTN-212ENST00000469159 PTPRKQ15262 1439 aa13.46□□□□□ -0.26
NCSTN-212ENST00000469159 ABCC1P33527 1531 aa13.45□□□□□ -0.26
NCSTN-212ENST00000469159 SUPT6HQ7KZ85 1726 aaKnown RBP13.45□□□□□ -0.26
NCSTN-212ENST00000469159 SHANK2Q9UPX8 1470 aa13.45□□□□□ -0.26
NCSTN-212ENST00000469159 RGS17Q9UGC6 210 aaPredicted RBP13.45□□□□□ -0.26
NCSTN-212ENST00000469159 CDC42BPBQ9Y5S2 1711 aa13.44□□□□□ -0.26
NCSTN-212ENST00000469159 ALKQ9UM73 1620 aa13.43□□□□□ -0.26
NCSTN-212ENST00000469159 CLIP1P30622 1438 aa13.43□□□□□ -0.26
NCSTN-212ENST00000469159 FMN1Q68DA7 1419 aa13.42□□□□□ -0.26
NCSTN-212ENST00000469159 CLTCQ00610 1675 aaKnown RBP13.41□□□□□ -0.26
NCSTN-212ENST00000469159 ITSN2Q9NZM3 1697 aa13.41□□□□□ -0.26
NCSTN-212ENST00000469159 A2ML1A8K2U0 1454 aa13.41□□□□□ -0.26
NCSTN-212ENST00000469159 DNMT1P26358 1616 aaKnown RBP13.4□□□□□ -0.26
NCSTN-212ENST00000469159 PREX2Q70Z35 1606 aa13.39□□□□□ -0.27
NCSTN-212ENST00000469159 NEURL4Q96JN8 1562 aa13.39□□□□□ -0.27
NCSTN-212ENST00000469159 SAMD9LQ8IVG5 1584 aa13.38□□□□□ -0.27
NCSTN-212ENST00000469159 VWDEQ8N2E2 1590 aa13.37□□□□□ -0.27
NCSTN-212ENST00000469159 EEA1Q15075 1411 aa13.37□□□□□ -0.27
NCSTN-212ENST00000469159 SPAG9O60271 1321 aaKnown RBP13.37□□□□□ -0.27
NCSTN-212ENST00000469159 GGT6Q6P531 493 aa13.36□□□□□ -0.27
NCSTN-212ENST00000469159 SENP3Q9H4L4 574 aaPredicted RBP13.36□□□□□ -0.27
NCSTN-212ENST00000469159 PLXNC1O60486 1568 aa13.36□□□□□ -0.27
NCSTN-212ENST00000469159 POLR1AO95602 1720 aaPredicted RBP13.36□□□□□ -0.27
NCSTN-212ENST00000469159 ANKLE2Q86XL3 938 aa13.34□□□□□ -0.27
NCSTN-212ENST00000469159 A2MP01023 1474 aa13.34□□□□□ -0.27
NCSTN-212ENST00000469159 POTEAQ6S8J7 498 aa13.33□□□□□ -0.28
NCSTN-212ENST00000469159 MED14O60244 1454 aa13.32□□□□□ -0.28
NCSTN-212ENST00000469159 ATP7AQ04656 1500 aa13.32□□□□□ -0.28
NCSTN-212ENST00000469159 ARHGAP35Q9NRY4 1499 aa13.31□□□□□ -0.28
NCSTN-212ENST00000469159 LRRC7Q96NW7 1537 aa13.31□□□□□ -0.28
NCSTN-212ENST00000469159 HNRNPMP52272 730 aaKnown RBP eCLIP13.31□□□□□ -0.28
NCSTN-212ENST00000469159 ZNF777Q9ULD5 760 aaPredicted RBP13.31□□□□□ -0.28
NCSTN-212ENST00000469159 TNRQ92752 1358 aa13.31□□□□□ -0.28
NCSTN-212ENST00000469159 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.31□□□□□ -0.28
NCSTN-212ENST00000469159 NPHP4O75161 1426 aaPredicted RBP13.3□□□□□ -0.28
NCSTN-212ENST00000469159 LRRIQ1Q96JM4 1722 aa13.3□□□□□ -0.28
NCSTN-212ENST00000469159 SYCP2Q9BX26 1530 aa13.3□□□□□ -0.28
NCSTN-212ENST00000469159 THEMISQ8N1K5 641 aaPredicted RBP13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms