RNA–Protein interactions for RNA: ENST00000468777.5

PCCB-208, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene PCCB, Length 1,877 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-208ENST00000468777 ARAP3Q8WWN8 1544 aa29.64■■■□□ 2.34
PCCB-208ENST00000468777 NEO1Q92859 1461 aa29.62■■■□□ 2.33
PCCB-208ENST00000468777 ITSN2Q9NZM3 1697 aa29.61■■■□□ 2.33
PCCB-208ENST00000468777 EFCAB2Q5VUJ9 269 aa29.61■■■□□ 2.33
PCCB-208ENST00000468777 CFAP74Q9C0B2 1584 aa29.6■■■□□ 2.33
PCCB-208ENST00000468777 AKNAQ7Z591 1439 aa29.59■■■□□ 2.33
PCCB-208ENST00000468777 CFDP1Q9UEE9 299 aaPredicted RBP29.59■■■□□ 2.33
PCCB-208ENST00000468777 KDM6BO15054 1643 aa29.59■■■□□ 2.33
PCCB-208ENST00000468777 COL17A1Q9UMD9 1497 aaPredicted RBP29.59■■■□□ 2.33
PCCB-208ENST00000468777 ZNF777Q9ULD5 760 aaPredicted RBP29.59■■■□□ 2.33
PCCB-208ENST00000468777 PHLDB1Q86UU1 1377 aa29.58■■■□□ 2.33
PCCB-208ENST00000468777 ADGRL1O94910 1474 aa29.54■■■□□ 2.32
PCCB-208ENST00000468777 SAMD9LQ8IVG5 1584 aa29.53■■■□□ 2.32
PCCB-208ENST00000468777 MYOM3Q5VTT5 1437 aa29.53■■■□□ 2.32
PCCB-208ENST00000468777 ZNF644Q9H582 1327 aaPredicted RBP29.51■■■□□ 2.31
PCCB-208ENST00000468777 SCAPERQ9BY12 1400 aa29.49■■■□□ 2.31
PCCB-208ENST00000468777 RAPGEF3O95398 923 aa29.48■■■□□ 2.31
PCCB-208ENST00000468777 ABCC1P33527 1531 aa29.48■■■□□ 2.31
PCCB-208ENST00000468777 ARHGEF12Q9NZN5 1544 aa29.46■■■□□ 2.31
PCCB-208ENST00000468777 SYCP2Q9BX26 1530 aa29.44■■■□□ 2.3
PCCB-208ENST00000468777 DENND4BO75064 1496 aaPredicted RBP29.44■■■□□ 2.3
PCCB-208ENST00000468777 FRMPD1Q5SYB0 1578 aa29.43■■■□□ 2.3
PCCB-208ENST00000468777 CAMSAP2Q08AD1 1489 aa29.43■■■□□ 2.3
PCCB-208ENST00000468777 RICTORQ6R327 1708 aa29.42■■■□□ 2.3
PCCB-208ENST00000468777 FGD6Q6ZV73 1430 aa29.42■■■□□ 2.3
PCCB-208ENST00000468777 MIA2Q96PC5 1412 aa29.42■■■□□ 2.3
PCCB-208ENST00000468777 HNRNPMP52272 730 aaKnown RBP eCLIP29.42■■■□□ 2.31e-7■■■□□ 18.3
PCCB-208ENST00000468777 POGZQ7Z3K3 1410 aa29.4■■■□□ 2.3
PCCB-208ENST00000468777 TRAPPC8Q9Y2L5 1435 aa29.39■■■□□ 2.29
PCCB-208ENST00000468777 PTPN23Q9H3S7 1636 aa29.38■■■□□ 2.29
PCCB-208ENST00000468777 AFAP1Q8N556 730 aa29.38■■■□□ 2.29
PCCB-208ENST00000468777 PLEKHH2Q8IVE3 1493 aa29.37■■■□□ 2.29
PCCB-208ENST00000468777 KIAA1107Q9UPP5 1409 aa29.36■■■□□ 2.29
PCCB-208ENST00000468777 ZNF518AQ6AHZ1 1483 aa29.34■■■□□ 2.29
PCCB-208ENST00000468777 MBD5Q9P267 1494 aa29.33■■■□□ 2.29
PCCB-208ENST00000468777 KDM5CP41229 1560 aa29.29■■■□□ 2.28
PCCB-208ENST00000468777 TCOF1Q13428 1488 aaKnown RBP29.29■■■□□ 2.28
PCCB-208ENST00000468777 FAM50AQ14320 339 aaKnown RBP29.28■■■□□ 2.28
PCCB-208ENST00000468777 ZMYM4Q5VZL5 1548 aa29.27■■■□□ 2.28
PCCB-208ENST00000468777 CCDC141Q6ZP82 1450 aa29.24■■■□□ 2.27
PCCB-208ENST00000468777 ARHGEF5Q12774 1597 aa29.24■■■□□ 2.27
PCCB-208ENST00000468777 MYT1LQ9UL68 1186 aa29.23■■■□□ 2.27
PCCB-208ENST00000468777 HECW2Q9P2P5 1572 aa29.22■■■□□ 2.27
PCCB-208ENST00000468777 YEATS2Q9ULM3 1422 aa29.22■■■□□ 2.27
PCCB-208ENST00000468777 SPAG9O60271 1321 aaKnown RBP29.2■■■□□ 2.26
PCCB-208ENST00000468777 ZFYVE16Q7Z3T8 1539 aa29.19■■■□□ 2.26
PCCB-208ENST00000468777 RRBP1Q9P2E9 1410 aaKnown RBP29.19■■■□□ 2.26
PCCB-208ENST00000468777 KIDINS220Q9ULH0 1771 aa29.18■■■□□ 2.26
PCCB-208ENST00000468777 MLH3Q9UHC1 1453 aa29.18■■■□□ 2.26
PCCB-208ENST00000468777 ARHGEF40Q8TER5 1519 aa29.17■■■□□ 2.26
PCCB-208ENST00000468777 DNMT1P26358 1616 aaKnown RBP29.17■■■□□ 2.26
PCCB-208ENST00000468777 MAGI2Q86UL8 1455 aa29.17■■■□□ 2.26
PCCB-208ENST00000468777 RSPH4AQ5TD94 716 aa29.17■■■□□ 2.26
PCCB-208ENST00000468777 ABCC5O15440 1437 aa29.16■■■□□ 2.26
PCCB-208ENST00000468777 INO80Q9ULG1 1556 aaPredicted RBP29.16■■■□□ 2.26
PCCB-208ENST00000468777 ATP7AQ04656 1500 aa29.15■■■□□ 2.26
PCCB-208ENST00000468777 DAPK1P53355 1430 aa29.15■■■□□ 2.26
PCCB-208ENST00000468777 ABCA6Q8N139 1617 aa29.14■■■□□ 2.26
PCCB-208ENST00000468777 CROCC2H7BZ55 1655 aa29.14■■■□□ 2.26
PCCB-208ENST00000468777 TSPY4P0CV99 314 aa29.13■■■□□ 2.25
PCCB-208ENST00000468777 TSPY10P0CW01 314 aa29.13■■■□□ 2.25
PCCB-208ENST00000468777 DIP2CQ9Y2E4 1556 aa29.11■■■□□ 2.25
PCCB-208ENST00000468777 C9orf84Q5VXU9 1444 aa29.1■■■□□ 2.25
PCCB-208ENST00000468777 ITGAEP38570 1179 aa29.1■■■□□ 2.25
PCCB-208ENST00000468777 CHIC2Q9UKJ5 165 aa29.08■■■□□ 2.25
PCCB-208ENST00000468777 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.07■■■□□ 2.24
PCCB-208ENST00000468777 MAST1Q9Y2H9 1570 aa29.07■■■□□ 2.24
PCCB-208ENST00000468777 RTEL1-TNFRSF6BF6WH68 1400 aa29.06■■■□□ 2.24
PCCB-208ENST00000468777 SHANK2Q9UPX8 1470 aa29.05■■■□□ 2.24
PCCB-208ENST00000468777 PTPRKQ15262 1439 aa29.05■■■□□ 2.24
PCCB-208ENST00000468777 SIGLEC1Q9BZZ2 1709 aa29.05■■■□□ 2.24
PCCB-208ENST00000468777 ATP10AO60312 1499 aa29.05■■■□□ 2.24
PCCB-208ENST00000468777 ADGBQ8N7X0 1667 aa29.01■■■□□ 2.23
PCCB-208ENST00000468777 PLXNC1O60486 1568 aa28.97■■■□□ 2.23
PCCB-208ENST00000468777 ARID4BQ4LE39 1312 aaPredicted RBP28.97■■■□□ 2.23
PCCB-208ENST00000468777 RRP7BPQ9NSQ0 103 aa28.96■■■□□ 2.23
PCCB-208ENST00000468777 A2MP01023 1474 aa28.96■■■□□ 2.23
PCCB-208ENST00000468777 REREQ9P2R6 1566 aa28.94■■■□□ 2.22
PCCB-208ENST00000468777 NCOA1Q15788 1441 aa28.93■■■□□ 2.22
PCCB-208ENST00000468777 ANKRD30AQ9BXX3 1397 aa28.92■■■□□ 2.22
PCCB-208ENST00000468777 KIF15Q9NS87 1388 aa28.92■■■□□ 2.22
PCCB-208ENST00000468777 ADGRL2O95490 1459 aa28.92■■■□□ 2.22
PCCB-208ENST00000468777 DHX29Q7Z478 1369 aaKnown RBP28.89■■■□□ 2.22
PCCB-208ENST00000468777 MLECQ14165 292 aa28.88■■■□□ 2.21
PCCB-208ENST00000468777 DUOX2Q9NRD8 1548 aa28.86■■■□□ 2.21
PCCB-208ENST00000468777 AGLP35573 1532 aa28.85■■■□□ 2.21
PCCB-208ENST00000468777 ROCK1Q13464 1354 aa28.84■■■□□ 2.21
PCCB-208ENST00000468777 BCORL1Q5H9F3 1711 aa28.83■■■□□ 2.21
PCCB-208ENST00000468777 KIF3BO15066 747 aa28.8■■■□□ 2.2
PCCB-208ENST00000468777 ERBINQ96RT1 1412 aa28.77■■■□□ 2.2
PCCB-208ENST00000468777 TRIM26Q12899 539 aaPredicted RBP28.77■■■□□ 2.2
PCCB-208ENST00000468777 GGT6Q6P531 493 aa28.77■■■□□ 2.2
PCCB-208ENST00000468777 PCGF6Q9BYE7 350 aa28.76■■■□□ 2.2
PCCB-208ENST00000468777 ANKRD50Q9ULJ7 1429 aa28.76■■■□□ 2.19
PCCB-208ENST00000468777 EIF2AK4Q9P2K8 1649 aaKnown RBP28.75■■■□□ 2.19
PCCB-208ENST00000468777 KDM4FA0A1W2PPD8 638 aa28.75■■■□□ 2.19
PCCB-208ENST00000468777 ADAMTSL3P82987 1691 aa28.74■■■□□ 2.19
PCCB-208ENST00000468777 MADDQ8WXG6 1647 aa28.73■■■□□ 2.19
PCCB-208ENST00000468777 NAIPQ13075 1403 aa28.72■■■□□ 2.19
PCCB-208ENST00000468777 GCC2Q8IWJ2 1684 aa28.7■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms