RNA–Protein interactions for RNA: ENST00000467062.5

SNAPC3-205, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-205ENST00000467062 KIAA0586Q9BVV6 1533 aa24.95■■□□□ 1.58
SNAPC3-205ENST00000467062 DENND4BO75064 1496 aaPredicted RBP24.94■■□□□ 1.58
SNAPC3-205ENST00000467062 ANP32CO43423 234 aa24.94■■□□□ 1.58
SNAPC3-205ENST00000467062 TCOF1Q13428 1488 aaKnown RBP24.94■■□□□ 1.58
SNAPC3-205ENST00000467062 ZNF777Q9ULD5 760 aaPredicted RBP24.94■■□□□ 1.58
SNAPC3-205ENST00000467062 GRIN2AQ12879 1464 aa24.92■■□□□ 1.58
SNAPC3-205ENST00000467062 NUP153P49790 1475 aaKnown RBP24.91■■□□□ 1.58
SNAPC3-205ENST00000467062 L3MBTL2Q969R5 705 aa24.89■■□□□ 1.58
SNAPC3-205ENST00000467062 PRG4Q92954 1404 aaPredicted RBP24.89■■□□□ 1.57
SNAPC3-205ENST00000467062 MIA2Q96PC5 1412 aa24.88■■□□□ 1.57
SNAPC3-205ENST00000467062 EIF4G3O43432 1585 aaKnown RBP24.87■■□□□ 1.57
SNAPC3-205ENST00000467062 HSPA5P11021 654 aaKnown RBP24.87■■□□□ 1.57
SNAPC3-205ENST00000467062 SALL2Q9Y467 1007 aaPredicted RBP24.87■■□□□ 1.57
SNAPC3-205ENST00000467062 KIAA0556O60303 1618 aa24.86■■□□□ 1.57
SNAPC3-205ENST00000467062 PLB1Q6P1J6 1458 aa24.85■■□□□ 1.57
SNAPC3-205ENST00000467062 KDM5BQ9UGL1 1544 aa24.85■■□□□ 1.57
SNAPC3-205ENST00000467062 JPH4Q96JJ6 628 aa24.84■■□□□ 1.57
SNAPC3-205ENST00000467062 CFDP1Q9UEE9 299 aaPredicted RBP24.84■■□□□ 1.57
SNAPC3-205ENST00000467062 ABCC5O15440 1437 aa24.83■■□□□ 1.56
SNAPC3-205ENST00000467062 DAPK1P53355 1430 aa24.83■■□□□ 1.56
SNAPC3-205ENST00000467062 SLC4A1APQ9BWU0 796 aaKnown RBP24.83■■□□□ 1.56
SNAPC3-205ENST00000467062 CCER2I3L3R5 266 aa24.82■■□□□ 1.56
SNAPC3-205ENST00000467062 UBE2Q2Q8WVN8 375 aa24.8■■□□□ 1.56
SNAPC3-205ENST00000467062 WASHC2AQ641Q2 1341 aa24.79■■□□□ 1.56
SNAPC3-205ENST00000467062 C11orf95C9JLR9 678 aaPredicted RBP24.75■■□□□ 1.55
SNAPC3-205ENST00000467062 NBPF8Q3BBV2 869 aa24.75■■□□□ 1.55
SNAPC3-205ENST00000467062 RAPGEF6Q8TEU7 1601 aa24.75■■□□□ 1.55
SNAPC3-205ENST00000467062 CEP170Q5SW79 1584 aa24.74■■□□□ 1.55
SNAPC3-205ENST00000467062 EIF4G2P78344 907 aaKnown RBP eCLIP24.74■■□□□ 1.55
SNAPC3-205ENST00000467062 AKNAQ7Z591 1439 aa24.73■■□□□ 1.55
SNAPC3-205ENST00000467062 NOP58Q9Y2X3 529 aaKnown RBP24.73■■□□□ 1.55
SNAPC3-205ENST00000467062 GCC2Q8IWJ2 1684 aa24.73■■□□□ 1.55
SNAPC3-205ENST00000467062 SYNJ2O15056 1496 aa24.71■■□□□ 1.55
SNAPC3-205ENST00000467062 ANKRD30BQ9BXX2 1392 aa24.7■■□□□ 1.54
SNAPC3-205ENST00000467062 TROQ12816 1431 aaPredicted RBP24.69■■□□□ 1.54
SNAPC3-205ENST00000467062 MAGI1Q96QZ7 1491 aaPredicted RBP24.69■■□□□ 1.54
SNAPC3-205ENST00000467062 NBR1Q14596 966 aa24.68■■□□□ 1.54
SNAPC3-205ENST00000467062 ROCK1Q13464 1354 aa24.68■■□□□ 1.54
SNAPC3-205ENST00000467062 ZNF326Q5BKZ1 582 aaKnown RBP24.67■■□□□ 1.54
SNAPC3-205ENST00000467062 PLEKHD1A6NEE1 506 aa24.65■■□□□ 1.54
SNAPC3-205ENST00000467062 GPATCH8Q9UKJ3 1502 aaKnown RBP24.65■■□□□ 1.54
SNAPC3-205ENST00000467062 CNGB1Q14028 1251 aaPredicted RBP24.65■■□□□ 1.54
SNAPC3-205ENST00000467062 CARMIL2Q6F5E8 1435 aa24.64■■□□□ 1.53
SNAPC3-205ENST00000467062 CAMSAP2Q08AD1 1489 aa24.64■■□□□ 1.53
SNAPC3-205ENST00000467062 CCDC184Q52MB2 194 aa24.63■■□□□ 1.53
SNAPC3-205ENST00000467062 CCDC136Q96JN2 1154 aa24.63■■□□□ 1.53
SNAPC3-205ENST00000467062 KIF14Q15058 1648 aa24.63■■□□□ 1.53
SNAPC3-205ENST00000467062 DNMT1P26358 1616 aaKnown RBP24.62■■□□□ 1.53
SNAPC3-205ENST00000467062 RTL5Q5HYW3 569 aaPredicted RBP24.62■■□□□ 1.53
SNAPC3-205ENST00000467062 NCOA1Q15788 1441 aa24.61■■□□□ 1.53
SNAPC3-205ENST00000467062 HNRNPUQ00839 825 aaKnown RBP eCLIP24.6■■□□□ 1.53
SNAPC3-205ENST00000467062 PPP4R2Q9NY27 417 aa24.6■■□□□ 1.53
SNAPC3-205ENST00000467062 PKD2Q13563 968 aa24.6■■□□□ 1.53
SNAPC3-205ENST00000467062 NUP160Q12769 1436 aa24.58■■□□□ 1.53
SNAPC3-205ENST00000467062 RPRD2Q5VT52 1461 aaKnown RBP24.58■■□□□ 1.52
SNAPC3-205ENST00000467062 HNRNPMP52272 730 aaKnown RBP eCLIP24.57■■□□□ 1.52
SNAPC3-205ENST00000467062 POLR3GLQ9BT43 218 aa24.56■■□□□ 1.52
SNAPC3-205ENST00000467062 PZPP20742 1482 aa24.53■■□□□ 1.52
SNAPC3-205ENST00000467062 ATP10BO94823 1461 aa24.52■■□□□ 1.52
SNAPC3-205ENST00000467062 IRX6P78412 446 aaPredicted RBP24.52■■□□□ 1.52
SNAPC3-205ENST00000467062 IL27Q8NEV9 243 aa24.52■■□□□ 1.52
SNAPC3-205ENST00000467062 TEX14Q8IWB6 1497 aa24.51■■□□□ 1.51
SNAPC3-205ENST00000467062 PAK3O75914 559 aaPredicted RBP24.51■■□□□ 1.51
SNAPC3-205ENST00000467062 CCDC7Q96M83 1385 aa24.5■■□□□ 1.51
SNAPC3-205ENST00000467062 ANKRD30AQ9BXX3 1397 aa24.49■■□□□ 1.51
SNAPC3-205ENST00000467062 FAM9BQ8IZU0 186 aa24.49■■□□□ 1.51
SNAPC3-205ENST00000467062 KIF7Q2M1P5 1343 aa24.48■■□□□ 1.51
SNAPC3-205ENST00000467062 TSPY4P0CV99 314 aa24.48■■□□□ 1.51
SNAPC3-205ENST00000467062 TSPY10P0CW01 314 aa24.48■■□□□ 1.51
SNAPC3-205ENST00000467062 ANKRD50Q9ULJ7 1429 aa24.47■■□□□ 1.51
SNAPC3-205ENST00000467062 NUP155O75694 1391 aa24.47■■□□□ 1.51
SNAPC3-205ENST00000467062 PRKRIP1Q9H875 184 aaPredicted RBP24.46■■□□□ 1.51
SNAPC3-205ENST00000467062 KDM2AQ9Y2K7 1162 aa24.46■■□□□ 1.51
SNAPC3-205ENST00000467062 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.45■■□□□ 1.5
SNAPC3-205ENST00000467062 PTPRGP23470 1445 aa24.44■■□□□ 1.5
SNAPC3-205ENST00000467062 CNTLNQ9NXG0 1405 aa24.44■■□□□ 1.5
SNAPC3-205ENST00000467062 RTN4Q9NQC3 1192 aaKnown RBP24.42■■□□□ 1.5
SNAPC3-205ENST00000467062 KIAA1107Q9UPP5 1409 aa24.42■■□□□ 1.5
SNAPC3-205ENST00000467062 MRS2Q9HD23 443 aa24.41■■□□□ 1.5
SNAPC3-205ENST00000467062 C9orf84Q5VXU9 1444 aa24.4■■□□□ 1.5
SNAPC3-205ENST00000467062 SPATA31E1Q6ZUB1 1445 aa24.4■■□□□ 1.5
SNAPC3-205ENST00000467062 SENP3-EIF4A1A0A087X0R7 540 aa24.39■■□□□ 1.5
SNAPC3-205ENST00000467062 ANP32AP39687 249 aaKnown RBP24.39■■□□□ 1.5
SNAPC3-205ENST00000467062 ABCA8O94911 1581 aa24.39■■□□□ 1.49
SNAPC3-205ENST00000467062 IPO9Q96P70 1041 aaKnown RBP24.39■■□□□ 1.49
SNAPC3-205ENST00000467062 ABCC10Q5T3U5 1492 aa24.38■■□□□ 1.49
SNAPC3-205ENST00000467062 ITSN2Q9NZM3 1697 aa24.37■■□□□ 1.49
SNAPC3-205ENST00000467062 ADGRL2O95490 1459 aa24.36■■□□□ 1.49
SNAPC3-205ENST00000467062 ZBTB47Q9UFB7 747 aaPredicted RBP24.36■■□□□ 1.49
SNAPC3-205ENST00000467062 KIF15Q9NS87 1388 aa24.34■■□□□ 1.49
SNAPC3-205ENST00000467062 ADCY10Q96PN6 1610 aa24.33■■□□□ 1.49
SNAPC3-205ENST00000467062 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.33■■□□□ 1.494e-6■■■□□ 16.3
SNAPC3-205ENST00000467062 USP47Q96K76 1375 aa24.33■■□□□ 1.49
SNAPC3-205ENST00000467062 DCAF11Q8TEB1 546 aa24.33■■□□□ 1.48
SNAPC3-205ENST00000467062 CDC42BPAQ5VT25 1732 aa24.32■■□□□ 1.48
SNAPC3-205ENST00000467062 B4GALNT3Q6L9W6 998 aa24.31■■□□□ 1.48
SNAPC3-205ENST00000467062 CARD11Q9BXL7 1154 aa24.3■■□□□ 1.48
SNAPC3-205ENST00000467062 RGL3Q3MIN7 710 aa24.29■■□□□ 1.48
SNAPC3-205ENST00000467062 ADGBQ8N7X0 1667 aa24.28■■□□□ 1.48
SNAPC3-205ENST00000467062 MBD5Q9P267 1494 aa24.26■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms