RNA–Protein interactions for RNA: ENST00000466425.1

PSMB4-202, Transcript of proteasome subunit beta 4, humanhuman

TSL 2

Gene PSMB4, Length 665 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB4-202ENST00000466425 PLCD3Q8N3E9 789 aa10.02□□□□□ -0.81
PSMB4-202ENST00000466425 MARVELD3Q96A59 401 aa10.02□□□□□ -0.81
PSMB4-202ENST00000466425 PPARGC1BQ86YN6 1023 aaKnown RBP10.01□□□□□ -0.81
PSMB4-202ENST00000466425 IGF1RP08069 1367 aa10.01□□□□□ -0.81
PSMB4-202ENST00000466425 FGD5Q6ZNL6 1462 aa10□□□□□ -0.81
PSMB4-202ENST00000466425 FBXO3Q9UK99 471 aa10□□□□□ -0.81
PSMB4-202ENST00000466425 TOPBP1Q92547 1522 aa9.99□□□□□ -0.81
PSMB4-202ENST00000466425 CARMIL1Q5VZK9 1371 aa9.99□□□□□ -0.81
PSMB4-202ENST00000466425 MNX1P50219 401 aaPredicted RBP9.96□□□□□ -0.82
PSMB4-202ENST00000466425 ABCA10Q8WWZ4 1543 aa9.96□□□□□ -0.82
PSMB4-202ENST00000466425 TRPC6Q9Y210 931 aa9.95□□□□□ -0.82
PSMB4-202ENST00000466425 WDR97A6NE52 1622 aa9.95□□□□□ -0.82
PSMB4-202ENST00000466425 TARBP1Q13395 1621 aaKnown RBP9.94□□□□□ -0.82
PSMB4-202ENST00000466425 CCER1Q8TC90 406 aaPredicted RBP9.93□□□□□ -0.82
PSMB4-202ENST00000466425 TSPYL2Q9H2G4 693 aaPredicted RBP9.93□□□□□ -0.82
PSMB4-202ENST00000466425 POLA1P09884 1462 aaPredicted RBP9.92□□□□□ -0.82
PSMB4-202ENST00000466425 IFT140Q96RY7 1462 aa9.92□□□□□ -0.82
PSMB4-202ENST00000466425 TIE1P35590 1138 aa9.92□□□□□ -0.82
PSMB4-202ENST00000466425 RANGAP1P46060 587 aaPredicted RBP9.92□□□□□ -0.82
PSMB4-202ENST00000466425 EIF4G3O43432 1585 aaKnown RBP9.91□□□□□ -0.82
PSMB4-202ENST00000466425 ARAP1Q96P48 1450 aa9.91□□□□□ -0.82
PSMB4-202ENST00000466425 SNPHO15079 494 aa9.9□□□□□ -0.82
PSMB4-202ENST00000466425 KIF12Q96FN5 646 aa9.9□□□□□ -0.82
PSMB4-202ENST00000466425 TTBK1Q5TCY1 1321 aaPredicted RBP9.89□□□□□ -0.83
PSMB4-202ENST00000466425 KRTAP3-3Q9BYR6 98 aa9.89□□□□□ -0.83
PSMB4-202ENST00000466425 KRTAP3-2Q9BYR7 98 aa9.89□□□□□ -0.83
PSMB4-202ENST00000466425 PBRM1Q86U86 1689 aa9.89□□□□□ -0.83
PSMB4-202ENST00000466425 ARHGAP35Q9NRY4 1499 aa9.87□□□□□ -0.83
PSMB4-202ENST00000466425 RAD54L2Q9Y4B4 1467 aa9.87□□□□□ -0.83
PSMB4-202ENST00000466425 CCDC61Q9Y6R9 512 aa9.87□□□□□ -0.83
PSMB4-202ENST00000466425 FHAD1B1AJZ9 1412 aa9.87□□□□□ -0.83
PSMB4-202ENST00000466425 TTLL13PA6NNM8 815 aa9.86□□□□□ -0.83
PSMB4-202ENST00000466425 CHD1O14646 1710 aa9.86□□□□□ -0.83
PSMB4-202ENST00000466425 KLHL34Q8N239 644 aa9.86□□□□□ -0.83
PSMB4-202ENST00000466425 ZBTB47Q9UFB7 747 aaPredicted RBP9.86□□□□□ -0.83
PSMB4-202ENST00000466425 VASPP50552 380 aaPredicted RBP9.85□□□□□ -0.83
PSMB4-202ENST00000466425 IER5LQ5T953 404 aa9.85□□□□□ -0.83
PSMB4-202ENST00000466425 CUL7Q14999 1698 aa9.84□□□□□ -0.83
PSMB4-202ENST00000466425 MAP3K1Q13233 1512 aa9.84□□□□□ -0.83
PSMB4-202ENST00000466425 EMP3P54852 163 aa9.83□□□□□ -0.84
PSMB4-202ENST00000466425 GAPVD1Q14C86 1478 aa9.83□□□□□ -0.84
PSMB4-202ENST00000466425 ZNF608Q9ULD9 1512 aaPredicted RBP9.82□□□□□ -0.84
PSMB4-202ENST00000466425 ABCA5Q8WWZ7 1642 aa9.82□□□□□ -0.84
PSMB4-202ENST00000466425 EFCAB5A4FU69 1503 aa9.82□□□□□ -0.84
PSMB4-202ENST00000466425 TRIM35Q9UPQ4 493 aa9.81□□□□□ -0.84
PSMB4-202ENST00000466425 TDRD9Q8NDG6 1382 aaKnown RBP9.8□□□□□ -0.84
PSMB4-202ENST00000466425 MAP3K13O43283 966 aa9.8□□□□□ -0.84
PSMB4-202ENST00000466425 HS3ST6Q96QI5 342 aa9.79□□□□□ -0.84
PSMB4-202ENST00000466425 FMN1Q68DA7 1419 aa9.79□□□□□ -0.84
PSMB4-202ENST00000466425 CLSPNQ9HAW4 1339 aa9.79□□□□□ -0.84
PSMB4-202ENST00000466425 AQRO60306 1485 aaKnown RBP eCLIP9.79□□□□□ -0.844e-8■■■■■ 27.3
PSMB4-202ENST00000466425 POTEB3A0JP26 581 aa9.78□□□□□ -0.84
PSMB4-202ENST00000466425 KANK4Q5T7N3 995 aaPredicted RBP9.78□□□□□ -0.84
PSMB4-202ENST00000466425 POTEBQ6S5H4 581 aa9.78□□□□□ -0.84
PSMB4-202ENST00000466425 RRBP1Q9P2E9 1410 aaKnown RBP9.78□□□□□ -0.84
PSMB4-202ENST00000466425 FAM205CA6NFA0 338 aa9.77□□□□□ -0.85
PSMB4-202ENST00000466425 MAGI1Q96QZ7 1491 aaPredicted RBP9.76□□□□□ -0.85
PSMB4-202ENST00000466425 CCNB3Q8WWL7 1395 aa9.75□□□□□ -0.85
PSMB4-202ENST00000466425 CASKIN1Q8WXD9 1431 aa9.75□□□□□ -0.85
PSMB4-202ENST00000466425 FYCO1Q9BQS8 1478 aa9.75□□□□□ -0.85
PSMB4-202ENST00000466425 RNF166Q96A37 237 aaPredicted RBP9.75□□□□□ -0.85
PSMB4-202ENST00000466425 GRIN2BQ13224 1484 aa9.74□□□□□ -0.85
PSMB4-202ENST00000466425 PLCG2P16885 1265 aa9.74□□□□□ -0.85
PSMB4-202ENST00000466425 RASEFQ8IZ41 740 aa9.74□□□□□ -0.85
PSMB4-202ENST00000466425 DNAJC5Q9H3Z4 198 aa9.74□□□□□ -0.85
PSMB4-202ENST00000466425 TIAM1Q13009 1591 aa9.73□□□□□ -0.85
PSMB4-202ENST00000466425 LRRC9Q6ZRR7 1453 aa9.72□□□□□ -0.85
PSMB4-202ENST00000466425 FHOD3Q2V2M9 1422 aa9.72□□□□□ -0.85
PSMB4-202ENST00000466425 SNAPC4Q5SXM2 1469 aa9.72□□□□□ -0.85
PSMB4-202ENST00000466425 ADAMTS12P58397 1594 aa9.71□□□□□ -0.85
PSMB4-202ENST00000466425 DCAF8Q5TAQ9 597 aa9.71□□□□□ -0.86
PSMB4-202ENST00000466425 P3H3Q8IVL6 736 aa9.71□□□□□ -0.86
PSMB4-202ENST00000466425 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.71□□□□□ -0.86
PSMB4-202ENST00000466425 ATP1B4Q9UN42 357 aaPredicted RBP9.71□□□□□ -0.86
PSMB4-202ENST00000466425 FAM212AQ96EL1 285 aa9.7□□□□□ -0.86
PSMB4-202ENST00000466425 SYNJ2O15056 1496 aa9.69□□□□□ -0.86
PSMB4-202ENST00000466425 NUBP1P53384 320 aa9.69□□□□□ -0.86
PSMB4-202ENST00000466425 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.69□□□□□ -0.86
PSMB4-202ENST00000466425 IFNLR1Q8IU57 520 aaPredicted RBP9.67□□□□□ -0.86
PSMB4-202ENST00000466425 CTTNBP2Q8WZ74 1663 aa9.67□□□□□ -0.86
PSMB4-202ENST00000466425 PCF11O94913 1555 aaKnown RBP9.66□□□□□ -0.86
PSMB4-202ENST00000466425 MTUS2Q5JR59 1369 aa9.65□□□□□ -0.86
PSMB4-202ENST00000466425 SPOCK2Q92563 424 aa9.65□□□□□ -0.86
PSMB4-202ENST00000466425 SAMD9Q5K651 1589 aa9.65□□□□□ -0.86
PSMB4-202ENST00000466425 CLASP1Q7Z460 1538 aa9.65□□□□□ -0.86
PSMB4-202ENST00000466425 CCDC18Q5T9S5 1454 aa9.64□□□□□ -0.87
PSMB4-202ENST00000466425 CFAP43Q8NDM7 1665 aa9.64□□□□□ -0.87
PSMB4-202ENST00000466425 RIMBP3CA6NJZ7 1639 aa9.64□□□□□ -0.87
PSMB4-202ENST00000466425 RIMBP3BA6NNM3 1639 aa9.64□□□□□ -0.87
PSMB4-202ENST00000466425 RIMBP3Q9UFD9 1639 aa9.64□□□□□ -0.87
PSMB4-202ENST00000466425 PHLDB1Q86UU1 1377 aa9.63□□□□□ -0.87
PSMB4-202ENST00000466425 KIAA0586Q9BVV6 1533 aa9.63□□□□□ -0.87
PSMB4-202ENST00000466425 ZNF316A6NFI3 1004 aaPredicted RBP9.63□□□□□ -0.87
PSMB4-202ENST00000466425 FAM50AQ14320 339 aaKnown RBP9.63□□□□□ -0.87
PSMB4-202ENST00000466425 GRIN2AQ12879 1464 aa9.63□□□□□ -0.87
PSMB4-202ENST00000466425 IQGAP2Q13576 1575 aa9.63□□□□□ -0.87
PSMB4-202ENST00000466425 DHX57Q6P158 1386 aaKnown RBP9.63□□□□□ -0.87
PSMB4-202ENST00000466425 CIZ1Q9ULV3 898 aaPredicted RBP9.62□□□□□ -0.87
PSMB4-202ENST00000466425 SETD5Q9C0A6 1442 aa9.62□□□□□ -0.87
PSMB4-202ENST00000466425 IRX5P78411 483 aaPredicted RBP9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms