RNA–Protein interactions for RNA: ENST00000464263.1

RAB11FIP3-208, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 3

Gene RAB11FIP3, Length 329 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-208ENST00000464263 ARHGAP5Q13017 1502 aa24.27■■□□□ 1.48
RAB11FIP3-208ENST00000464263 GPATCH8Q9UKJ3 1502 aaKnown RBP24.27■■□□□ 1.48
RAB11FIP3-208ENST00000464263 RAPGEF3O95398 923 aa24.27■■□□□ 1.48
RAB11FIP3-208ENST00000464263 KANK4Q5T7N3 995 aaPredicted RBP24.27■■□□□ 1.48
RAB11FIP3-208ENST00000464263 SUPT6HQ7KZ85 1726 aaKnown RBP24.24■■□□□ 1.47
RAB11FIP3-208ENST00000464263 CCNB3Q8WWL7 1395 aa24.23■■□□□ 1.47
RAB11FIP3-208ENST00000464263 DENND4BO75064 1496 aaPredicted RBP24.23■■□□□ 1.47
RAB11FIP3-208ENST00000464263 RICTORQ6R327 1708 aa24.22■■□□□ 1.47
RAB11FIP3-208ENST00000464263 FRMPD1Q5SYB0 1578 aa24.22■■□□□ 1.47
RAB11FIP3-208ENST00000464263 ADGRL1O94910 1474 aa24.22■■□□□ 1.47
RAB11FIP3-208ENST00000464263 SCAPERQ9BY12 1400 aa24.22■■□□□ 1.47
RAB11FIP3-208ENST00000464263 APLP2Q06481 763 aa24.22■■□□□ 1.47
RAB11FIP3-208ENST00000464263 NCOA2Q15596 1464 aa24.2■■□□□ 1.47
RAB11FIP3-208ENST00000464263 CFDP1Q9UEE9 299 aaPredicted RBP24.17■■□□□ 1.46
RAB11FIP3-208ENST00000464263 ITSN2Q9NZM3 1697 aa24.15■■□□□ 1.46
RAB11FIP3-208ENST00000464263 POGZQ7Z3K3 1410 aa24.14■■□□□ 1.45
RAB11FIP3-208ENST00000464263 SAMD9LQ8IVG5 1584 aa24.14■■□□□ 1.45
RAB11FIP3-208ENST00000464263 ZNF777Q9ULD5 760 aaPredicted RBP24.14■■□□□ 1.45
RAB11FIP3-208ENST00000464263 ARHGEF12Q9NZN5 1544 aa24.14■■□□□ 1.45
RAB11FIP3-208ENST00000464263 ABCC1P33527 1531 aa24.13■■□□□ 1.45
RAB11FIP3-208ENST00000464263 ZMYM4Q5VZL5 1548 aa24.1■■□□□ 1.45
RAB11FIP3-208ENST00000464263 AFAP1Q8N556 730 aa24.1■■□□□ 1.45
RAB11FIP3-208ENST00000464263 TRAPPC8Q9Y2L5 1435 aa24.08■■□□□ 1.44
RAB11FIP3-208ENST00000464263 ZNF644Q9H582 1327 aaPredicted RBP24.08■■□□□ 1.44
RAB11FIP3-208ENST00000464263 ZNF518AQ6AHZ1 1483 aa24.07■■□□□ 1.44
RAB11FIP3-208ENST00000464263 HNRNPMP52272 730 aaKnown RBP eCLIP24.07■■□□□ 1.44
RAB11FIP3-208ENST00000464263 KIAA1107Q9UPP5 1409 aa24.07■■□□□ 1.44
RAB11FIP3-208ENST00000464263 MAGI2Q86UL8 1455 aa24.06■■□□□ 1.44
RAB11FIP3-208ENST00000464263 PLEKHH2Q8IVE3 1493 aa24.06■■□□□ 1.44
RAB11FIP3-208ENST00000464263 KDM5CP41229 1560 aa24.05■■□□□ 1.44
RAB11FIP3-208ENST00000464263 SYCP2Q9BX26 1530 aa24.05■■□□□ 1.44
RAB11FIP3-208ENST00000464263 MYOM3Q5VTT5 1437 aa24.01■■□□□ 1.43
RAB11FIP3-208ENST00000464263 YEATS2Q9ULM3 1422 aa24.01■■□□□ 1.43
RAB11FIP3-208ENST00000464263 ZFYVE16Q7Z3T8 1539 aa24.01■■□□□ 1.43
RAB11FIP3-208ENST00000464263 ARHGEF40Q8TER5 1519 aa24.01■■□□□ 1.43
RAB11FIP3-208ENST00000464263 MBD5Q9P267 1494 aa24■■□□□ 1.43
RAB11FIP3-208ENST00000464263 MIA2Q96PC5 1412 aa23.99■■□□□ 1.43
RAB11FIP3-208ENST00000464263 MLH3Q9UHC1 1453 aa23.99■■□□□ 1.43
RAB11FIP3-208ENST00000464263 CAMSAP2Q08AD1 1489 aa23.98■■□□□ 1.43
RAB11FIP3-208ENST00000464263 HECW2Q9P2P5 1572 aa23.97■■□□□ 1.43
RAB11FIP3-208ENST00000464263 KDM4FA0A1W2PPD8 638 aa23.96■■□□□ 1.43
RAB11FIP3-208ENST00000464263 KIDINS220Q9ULH0 1771 aa23.96■■□□□ 1.43
RAB11FIP3-208ENST00000464263 ATP10AO60312 1499 aa23.94■■□□□ 1.42
RAB11FIP3-208ENST00000464263 SPAG9O60271 1321 aaKnown RBP23.92■■□□□ 1.42
RAB11FIP3-208ENST00000464263 RSPH4AQ5TD94 716 aa23.92■■□□□ 1.42
RAB11FIP3-208ENST00000464263 MYT1LQ9UL68 1186 aa23.92■■□□□ 1.42
RAB11FIP3-208ENST00000464263 SIGLEC1Q9BZZ2 1709 aa23.92■■□□□ 1.42
RAB11FIP3-208ENST00000464263 DIP2CQ9Y2E4 1556 aa23.91■■□□□ 1.42
RAB11FIP3-208ENST00000464263 ABCA6Q8N139 1617 aa23.9■■□□□ 1.42
RAB11FIP3-208ENST00000464263 PPARGC1BQ86YN6 1023 aaKnown RBP23.89■■□□□ 1.41
RAB11FIP3-208ENST00000464263 ARHGEF5Q12774 1597 aa23.89■■□□□ 1.41
RAB11FIP3-208ENST00000464263 PTPN23Q9H3S7 1636 aa23.88■■□□□ 1.41
RAB11FIP3-208ENST00000464263 FGD6Q6ZV73 1430 aa23.88■■□□□ 1.41
RAB11FIP3-208ENST00000464263 INO80Q9ULG1 1556 aaPredicted RBP23.87■■□□□ 1.41
RAB11FIP3-208ENST00000464263 C9orf84Q5VXU9 1444 aa23.87■■□□□ 1.41
RAB11FIP3-208ENST00000464263 CCDC141Q6ZP82 1450 aa23.87■■□□□ 1.41
RAB11FIP3-208ENST00000464263 ARID4BQ4LE39 1312 aaPredicted RBP23.86■■□□□ 1.41
RAB11FIP3-208ENST00000464263 ATP7AQ04656 1500 aa23.86■■□□□ 1.41
RAB11FIP3-208ENST00000464263 RTEL1-TNFRSF6BF6WH68 1400 aa23.84■■□□□ 1.41
RAB11FIP3-208ENST00000464263 BCORL1Q5H9F3 1711 aa23.84■■□□□ 1.41
RAB11FIP3-208ENST00000464263 REREQ9P2R6 1566 aa23.84■■□□□ 1.41
RAB11FIP3-208ENST00000464263 TCOF1Q13428 1488 aaKnown RBP23.84■■□□□ 1.41
RAB11FIP3-208ENST00000464263 ADAMTSL3P82987 1691 aa23.82■■□□□ 1.4
RAB11FIP3-208ENST00000464263 TSPY4P0CV99 314 aa23.81■■□□□ 1.4
RAB11FIP3-208ENST00000464263 TSPY10P0CW01 314 aa23.81■■□□□ 1.4
RAB11FIP3-208ENST00000464263 ADGBQ8N7X0 1667 aa23.77■■□□□ 1.4
RAB11FIP3-208ENST00000464263 AEBP2Q6ZN18 517 aaPredicted RBP23.77■■□□□ 1.4
RAB11FIP3-208ENST00000464263 AGLP35573 1532 aa23.77■■□□□ 1.4
RAB11FIP3-208ENST00000464263 MAST1Q9Y2H9 1570 aa23.77■■□□□ 1.4
RAB11FIP3-208ENST00000464263 ABCC5O15440 1437 aa23.76■■□□□ 1.39
RAB11FIP3-208ENST00000464263 A2MP01023 1474 aa23.75■■□□□ 1.39
RAB11FIP3-208ENST00000464263 DNMT1P26358 1616 aaKnown RBP23.74■■□□□ 1.39
RAB11FIP3-208ENST00000464263 MLECQ14165 292 aa23.74■■□□□ 1.39
RAB11FIP3-208ENST00000464263 PLXNC1O60486 1568 aa23.73■■□□□ 1.39
RAB11FIP3-208ENST00000464263 CROCC2H7BZ55 1655 aa23.73■■□□□ 1.39
RAB11FIP3-208ENST00000464263 FAM50AQ14320 339 aaKnown RBP23.72■■□□□ 1.39
RAB11FIP3-208ENST00000464263 DAPK1P53355 1430 aa23.72■■□□□ 1.39
RAB11FIP3-208ENST00000464263 MADDQ8WXG6 1647 aa23.71■■□□□ 1.39
RAB11FIP3-208ENST00000464263 DHX29Q7Z478 1369 aaKnown RBP23.7■■□□□ 1.38
RAB11FIP3-208ENST00000464263 SHANK2Q9UPX8 1470 aa23.68■■□□□ 1.38
RAB11FIP3-208ENST00000464263 FER1L4A9Z1Z3 1794 aa23.67■■□□□ 1.38
RAB11FIP3-208ENST00000464263 RIMS1Q86UR5 1692 aaKnown RBP23.66■■□□□ 1.38
RAB11FIP3-208ENST00000464263 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.65■■□□□ 1.38
RAB11FIP3-208ENST00000464263 PTPRMP28827 1452 aa23.64■■□□□ 1.38
RAB11FIP3-208ENST00000464263 CHIC2Q9UKJ5 165 aa23.62■■□□□ 1.37
RAB11FIP3-208ENST00000464263 RRBP1Q9P2E9 1410 aaKnown RBP23.61■■□□□ 1.37
RAB11FIP3-208ENST00000464263 RRP7BPQ9NSQ0 103 aa23.6■■□□□ 1.37
RAB11FIP3-208ENST00000464263 PTPRKQ15262 1439 aa23.59■■□□□ 1.37
RAB11FIP3-208ENST00000464263 KIF3BO15066 747 aa23.59■■□□□ 1.37
RAB11FIP3-208ENST00000464263 DUOX2Q9NRD8 1548 aa23.59■■□□□ 1.37
RAB11FIP3-208ENST00000464263 NCOA1Q15788 1441 aa23.59■■□□□ 1.37
RAB11FIP3-208ENST00000464263 GGT6Q6P531 493 aa23.58■■□□□ 1.37
RAB11FIP3-208ENST00000464263 ADGRL2O95490 1459 aa23.57■■□□□ 1.36
RAB11FIP3-208ENST00000464263 ANKRD30AQ9BXX3 1397 aa23.57■■□□□ 1.36
RAB11FIP3-208ENST00000464263 KIF15Q9NS87 1388 aa23.57■■□□□ 1.36
RAB11FIP3-208ENST00000464263 PPP6R1Q9UPN7 881 aa23.55■■□□□ 1.36
RAB11FIP3-208ENST00000464263 EIF2AK4Q9P2K8 1649 aaKnown RBP23.54■■□□□ 1.36
RAB11FIP3-208ENST00000464263 ESF1Q9H501 851 aaKnown RBP23.52■■□□□ 1.36
RAB11FIP3-208ENST00000464263 CNTLNQ9NXG0 1405 aa23.51■■□□□ 1.35
RAB11FIP3-208ENST00000464263 ITGAEP38570 1179 aa23.5■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms