RNA–Protein interactions for RNA: ENST00000464263.1

RAB11FIP3-208, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 3

Gene RAB11FIP3, Length 329 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-208ENST00000464263 NISCHQ9Y2I1 1504 aa37.31■■■■□ 3.56
RAB11FIP3-208ENST00000464263 CCDC180Q9P1Z9 1646 aa33.11■■■□□ 2.89
RAB11FIP3-208ENST00000464263 ABCC9O60706 1549 aa32.29■■■□□ 2.76
RAB11FIP3-208ENST00000464263 DCAF8L2P0C7V8 631 aa31.12■■■□□ 2.57
RAB11FIP3-208ENST00000464263 NACADO15069 1562 aa31.11■■■□□ 2.57
RAB11FIP3-208ENST00000464263 RB1CC1Q8TDY2 1594 aa31.1■■■□□ 2.57
RAB11FIP3-208ENST00000464263 ZCCHC6Q5VYS8 1495 aaKnown RBP31.08■■■□□ 2.57
RAB11FIP3-208ENST00000464263 MYO15BQ96JP2 1530 aa30.97■■■□□ 2.55
RAB11FIP3-208ENST00000464263 DCAF1Q9Y4B6 1507 aa30.88■■■□□ 2.53
RAB11FIP3-208ENST00000464263 UNC13AQ9UPW8 1703 aa30.48■■■□□ 2.47
RAB11FIP3-208ENST00000464263 PABPN1Q86U42 306 aaKnown RBP eCLIP30.22■■■□□ 2.43
RAB11FIP3-208ENST00000464263 BICRAQ9NZM4 1560 aa30.21■■■□□ 2.43
RAB11FIP3-208ENST00000464263 SCRIBQ14160 1630 aa30.2■■■□□ 2.43
RAB11FIP3-208ENST00000464263 SHROOM4Q9ULL8 1493 aa29.83■■■□□ 2.37
RAB11FIP3-208ENST00000464263 DNAJC5BQ9UF47 199 aa29.63■■■□□ 2.33
RAB11FIP3-208ENST00000464263 EIF4G1Q04637 1599 aaKnown RBP29.37■■■□□ 2.29
RAB11FIP3-208ENST00000464263 CC2D2AQ9P2K1 1620 aa29.23■■■□□ 2.27
RAB11FIP3-208ENST00000464263 CECR2Q9BXF3 1484 aa29.07■■■□□ 2.24
RAB11FIP3-208ENST00000464263 SMARCA4P51532 1647 aa28.92■■■□□ 2.22
RAB11FIP3-208ENST00000464263 BAZ1AQ9NRL2 1556 aaPredicted RBP28.88■■■□□ 2.21
RAB11FIP3-208ENST00000464263 MROH2BQ7Z745 1585 aa28.76■■■□□ 2.19
RAB11FIP3-208ENST00000464263 ATAD2BQ9ULI0 1458 aa28.74■■■□□ 2.19
RAB11FIP3-208ENST00000464263 NCAPD3P42695 1498 aa28.72■■■□□ 2.19
RAB11FIP3-208ENST00000464263 SMARCA2P51531 1590 aa28.69■■■□□ 2.18
RAB11FIP3-208ENST00000464263 PEG3Q9GZU2 1588 aa28.64■■■□□ 2.18
RAB11FIP3-208ENST00000464263 HMGXB3Q12766 1538 aa28.55■■■□□ 2.16
RAB11FIP3-208ENST00000464263 BAZ1BQ9UIG0 1483 aaKnown RBP28.47■■■□□ 2.15
RAB11FIP3-208ENST00000464263 RSF1Q96T23 1441 aaPredicted RBP28.47■■■□□ 2.15
RAB11FIP3-208ENST00000464263 WIZO95785 1651 aa28.47■■■□□ 2.15
RAB11FIP3-208ENST00000464263 TOP2AP11388 1531 aaKnown RBP28.13■■■□□ 2.09
RAB11FIP3-208ENST00000464263 NESP48681 1621 aa28■■■□□ 2.07
RAB11FIP3-208ENST00000464263 LAMC3Q9Y6N6 1575 aa27.93■■■□□ 2.06
RAB11FIP3-208ENST00000464263 CADPSQ9ULU8 1353 aa27.88■■■□□ 2.05
RAB11FIP3-208ENST00000464263 CCDC88BA6NC98 1476 aa27.83■■■□□ 2.05
RAB11FIP3-208ENST00000464263 SUPT5HO00267 1087 aaKnown RBP27.81■■■□□ 2.04
RAB11FIP3-208ENST00000464263 ERCC6Q03468 1493 aa27.79■■■□□ 2.04
RAB11FIP3-208ENST00000464263 CFTRP13569 1480 aa27.74■■■□□ 2.03
RAB11FIP3-208ENST00000464263 PDS5BQ9NTI5 1447 aa27.73■■■□□ 2.03
RAB11FIP3-208ENST00000464263 KIF21AQ7Z4S6 1674 aa27.68■■■□□ 2.02
RAB11FIP3-208ENST00000464263 PRDM2Q13029 1718 aa27.55■■■□□ 2
RAB11FIP3-208ENST00000464263 FANCD2Q9BXW9 1451 aa27.54■■■□□ 2
RAB11FIP3-208ENST00000464263 THOC2Q8NI27 1593 aaKnown RBP27.53■■■□□ 2
RAB11FIP3-208ENST00000464263 CUX2O14529 1486 aa27.48■■□□□ 1.99
RAB11FIP3-208ENST00000464263 CEP164Q9UPV0 1460 aa27.48■■□□□ 1.99
RAB11FIP3-208ENST00000464263 MRC2Q9UBG0 1479 aa27.43■■□□□ 1.98
RAB11FIP3-208ENST00000464263 WDR62O43379 1518 aa27.34■■□□□ 1.97
RAB11FIP3-208ENST00000464263 URB2Q14146 1524 aaKnown RBP27.28■■□□□ 1.96
RAB11FIP3-208ENST00000464263 ABCC8Q09428 1581 aa27.13■■□□□ 1.93
RAB11FIP3-208ENST00000464263 TOPBP1Q92547 1522 aa27.12■■□□□ 1.93
RAB11FIP3-208ENST00000464263 DNMBPQ6XZF7 1577 aa27.09■■□□□ 1.93
RAB11FIP3-208ENST00000464263 CUX1P39880 1505 aa26.97■■□□□ 1.91
RAB11FIP3-208ENST00000464263 IFT140Q96RY7 1462 aa26.92■■□□□ 1.9
RAB11FIP3-208ENST00000464263 POLA1P09884 1462 aaPredicted RBP26.89■■□□□ 1.9
RAB11FIP3-208ENST00000464263 TARBP1Q13395 1621 aaKnown RBP26.85■■□□□ 1.89
RAB11FIP3-208ENST00000464263 FGD5Q6ZNL6 1462 aa26.84■■□□□ 1.89
RAB11FIP3-208ENST00000464263 WRNQ14191 1432 aaPredicted RBP eCLIP26.81■■□□□ 1.88
RAB11FIP3-208ENST00000464263 ZNF608Q9ULD9 1512 aaPredicted RBP26.8■■□□□ 1.88
RAB11FIP3-208ENST00000464263 SOGA1O94964 1423 aa26.8■■□□□ 1.88
RAB11FIP3-208ENST00000464263 RAD54L2Q9Y4B4 1467 aa26.79■■□□□ 1.88
RAB11FIP3-208ENST00000464263 TOP2BQ02880 1626 aa26.76■■□□□ 1.87
RAB11FIP3-208ENST00000464263 BIVM-ERCC5R4GMW8 1640 aa26.76■■□□□ 1.87
RAB11FIP3-208ENST00000464263 SYNJ1O43426 1573 aa26.75■■□□□ 1.87
RAB11FIP3-208ENST00000464263 EIF4G3O43432 1585 aaKnown RBP26.68■■□□□ 1.86
RAB11FIP3-208ENST00000464263 AQRO60306 1485 aaKnown RBP eCLIP26.68■■□□□ 1.86
RAB11FIP3-208ENST00000464263 TDRD9Q8NDG6 1382 aaKnown RBP26.64■■□□□ 1.86
RAB11FIP3-208ENST00000464263 WDR97A6NE52 1622 aa26.64■■□□□ 1.85
RAB11FIP3-208ENST00000464263 ABCA10Q8WWZ4 1543 aa26.6■■□□□ 1.85
RAB11FIP3-208ENST00000464263 DNAJC5Q9H3Z4 198 aa26.58■■□□□ 1.85
RAB11FIP3-208ENST00000464263 GAPVD1Q14C86 1478 aa26.49■■□□□ 1.83
RAB11FIP3-208ENST00000464263 ABCA5Q8WWZ7 1642 aa26.48■■□□□ 1.83
RAB11FIP3-208ENST00000464263 GRIN2BQ13224 1484 aa26.45■■□□□ 1.82
RAB11FIP3-208ENST00000464263 PBRM1Q86U86 1689 aa26.43■■□□□ 1.82
RAB11FIP3-208ENST00000464263 OSCARQ8IYS5 282 aa26.41■■□□□ 1.82
RAB11FIP3-208ENST00000464263 SNAPC4Q5SXM2 1469 aa26.4■■□□□ 1.82
RAB11FIP3-208ENST00000464263 MAGI1Q96QZ7 1491 aaPredicted RBP26.37■■□□□ 1.81
RAB11FIP3-208ENST00000464263 CHD1O14646 1710 aa26.36■■□□□ 1.81
RAB11FIP3-208ENST00000464263 FBLN2P98095 1184 aa26.31■■□□□ 1.8
RAB11FIP3-208ENST00000464263 ERICH3Q5RHP9 1530 aa26.28■■□□□ 1.8
RAB11FIP3-208ENST00000464263 CHMP7Q8WUX9 453 aaPredicted RBP26.27■■□□□ 1.8
RAB11FIP3-208ENST00000464263 SYNJ2O15056 1496 aa26.27■■□□□ 1.8
RAB11FIP3-208ENST00000464263 TRIM41Q8WV44 630 aa26.26■■□□□ 1.79
RAB11FIP3-208ENST00000464263 KIF27Q86VH2 1401 aa26.23■■□□□ 1.79
RAB11FIP3-208ENST00000464263 ADAMTS12P58397 1594 aa26.2■■□□□ 1.78
RAB11FIP3-208ENST00000464263 FHAD1B1AJZ9 1412 aa26.18■■□□□ 1.78
RAB11FIP3-208ENST00000464263 IGF1RP08069 1367 aa26.17■■□□□ 1.78
RAB11FIP3-208ENST00000464263 GRIN2AQ12879 1464 aa26.11■■□□□ 1.77
RAB11FIP3-208ENST00000464263 RUSC2Q8N2Y8 1516 aa26.09■■□□□ 1.77
RAB11FIP3-208ENST00000464263 CLASP1Q7Z460 1538 aa26.06■■□□□ 1.76
RAB11FIP3-208ENST00000464263 CHIC1Q5VXU3 224 aa26.05■■□□□ 1.76
RAB11FIP3-208ENST00000464263 CUL7Q14999 1698 aa26.05■■□□□ 1.76
RAB11FIP3-208ENST00000464263 NUP160Q12769 1436 aa26.01■■□□□ 1.75
RAB11FIP3-208ENST00000464263 CEP170Q5SW79 1584 aa25.99■■□□□ 1.75
RAB11FIP3-208ENST00000464263 CARMIL1Q5VZK9 1371 aa25.99■■□□□ 1.75
RAB11FIP3-208ENST00000464263 RIMBP3CA6NJZ7 1639 aa25.96■■□□□ 1.75
RAB11FIP3-208ENST00000464263 RIMBP3BA6NNM3 1639 aa25.96■■□□□ 1.75
RAB11FIP3-208ENST00000464263 RIMBP3Q9UFD9 1639 aa25.96■■□□□ 1.75
RAB11FIP3-208ENST00000464263 ARHGEF11O15085 1522 aa25.94■■□□□ 1.74
RAB11FIP3-208ENST00000464263 RAPGEF2Q9Y4G8 1499 aa25.84■■□□□ 1.73
RAB11FIP3-208ENST00000464263 SHROOM2Q13796 1616 aa25.81■■□□□ 1.72
RAB11FIP3-208ENST00000464263 CSRNP3Q8WYN3 585 aa25.8■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms