RNA–Protein interactions for RNA: ENST00000464011.1

TFRC-208, Transcript of transferrin receptor, humanhuman

TSL 4

Gene TFRC, Length 546 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFRC-208ENST00000464011 ARHGEF12Q9NZN5 1544 aa18.7■□□□□ 0.58
TFRC-208ENST00000464011 CFAP74Q9C0B2 1584 aa18.67■□□□□ 0.58
TFRC-208ENST00000464011 UHRF1BP1Q6BDS2 1440 aa18.66■□□□□ 0.58
TFRC-208ENST00000464011 MAGI2Q86UL8 1455 aa18.65■□□□□ 0.58
TFRC-208ENST00000464011 MED1Q15648 1581 aaPredicted RBP18.65■□□□□ 0.58
TFRC-208ENST00000464011 SETD1BQ9UPS6 1966 aaKnown RBP18.65■□□□□ 0.58
TFRC-208ENST00000464011 SUPT5HO00267 1087 aaKnown RBP18.64■□□□□ 0.57
TFRC-208ENST00000464011 SCAF1Q9H7N4 1312 aaKnown RBP18.64■□□□□ 0.57
TFRC-208ENST00000464011 HECW1Q76N89 1606 aa18.59■□□□□ 0.57
TFRC-208ENST00000464011 ARID3CA6NKF2 412 aa18.58■□□□□ 0.56
TFRC-208ENST00000464011 MLECQ14165 292 aa18.58■□□□□ 0.56
TFRC-208ENST00000464011 NCOA1Q15788 1441 aa18.54■□□□□ 0.56
TFRC-208ENST00000464011 RAPGEF6Q8TEU7 1601 aa18.53■□□□□ 0.56
TFRC-208ENST00000464011 CEBPAP49715 358 aaPredicted RBP18.53■□□□□ 0.56
TFRC-208ENST00000464011 MAPK8IP2Q13387 824 aaPredicted RBP18.53■□□□□ 0.56
TFRC-208ENST00000464011 C9orf84Q5VXU9 1444 aa18.53■□□□□ 0.56
TFRC-208ENST00000464011 ATP10AO60312 1499 aa18.5■□□□□ 0.55
TFRC-208ENST00000464011 C3P01024 1663 aa18.5■□□□□ 0.55
TFRC-208ENST00000464011 UBAP1LF5GYI3 381 aa18.49■□□□□ 0.55
TFRC-208ENST00000464011 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.47■□□□□ 0.554e-7■□□□□ 8.3
TFRC-208ENST00000464011 FAM9AQ8IZU1 332 aaPredicted RBP18.44■□□□□ 0.54
TFRC-208ENST00000464011 NUP153P49790 1475 aaKnown RBP18.44■□□□□ 0.54
TFRC-208ENST00000464011 SAMD9Q5K651 1589 aa18.42■□□□□ 0.54
TFRC-208ENST00000464011 CAMSAP1Q5T5Y3 1602 aa18.41■□□□□ 0.54
TFRC-208ENST00000464011 ZNF335Q9H4Z2 1342 aaPredicted RBP18.4■□□□□ 0.54
TFRC-208ENST00000464011 TRAPPC8Q9Y2L5 1435 aa18.4■□□□□ 0.54
TFRC-208ENST00000464011 REREQ9P2R6 1566 aa18.39■□□□□ 0.53
TFRC-208ENST00000464011 SCAPERQ9BY12 1400 aa18.39■□□□□ 0.53
TFRC-208ENST00000464011 HSPA1LP34931 641 aa18.38■□□□□ 0.53
TFRC-208ENST00000464011 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.37■□□□□ 0.53
TFRC-208ENST00000464011 HNRNPUL2Q1KMD3 747 aaKnown RBP18.37■□□□□ 0.53
TFRC-208ENST00000464011 PPP4R3CPQ6ZMV5 832 aa18.37■□□□□ 0.53
TFRC-208ENST00000464011 KDM5CP41229 1560 aa18.34■□□□□ 0.53
TFRC-208ENST00000464011 DIP2CQ9Y2E4 1556 aa18.34■□□□□ 0.53
TFRC-208ENST00000464011 PRXQ9BXM0 1461 aa18.33■□□□□ 0.53
TFRC-208ENST00000464011 AGLP35573 1532 aa18.33■□□□□ 0.52
TFRC-208ENST00000464011 P3H3Q8IVL6 736 aa18.32■□□□□ 0.52
TFRC-208ENST00000464011 PLA2R1Q13018 1463 aa18.32■□□□□ 0.52
TFRC-208ENST00000464011 ZNF142P52746 1687 aaPredicted RBP18.31■□□□□ 0.52
TFRC-208ENST00000464011 ZNF518AQ6AHZ1 1483 aa18.31■□□□□ 0.52
TFRC-208ENST00000464011 PLEKHD1A6NEE1 506 aa18.3■□□□□ 0.52
TFRC-208ENST00000464011 PLCH2O75038 1416 aa18.3■□□□□ 0.52
TFRC-208ENST00000464011 NPATQ14207 1427 aa18.29■□□□□ 0.52
TFRC-208ENST00000464011 TCOF1Q13428 1488 aaKnown RBP18.28■□□□□ 0.52
TFRC-208ENST00000464011 MROH2AA6NES4 1674 aa18.28■□□□□ 0.52
TFRC-208ENST00000464011 ABCA6Q8N139 1617 aa18.27■□□□□ 0.52
TFRC-208ENST00000464011 CNTLNQ9NXG0 1405 aa18.27■□□□□ 0.52
TFRC-208ENST00000464011 MYO5CQ9NQX4 1742 aa18.26■□□□□ 0.51
TFRC-208ENST00000464011 SUPT6HQ7KZ85 1726 aaKnown RBP18.25■□□□□ 0.51
TFRC-208ENST00000464011 NCKAP5LQ9HCH0 1330 aa18.24■□□□□ 0.51
TFRC-208ENST00000464011 MYO3AQ8NEV4 1616 aa18.24■□□□□ 0.51
TFRC-208ENST00000464011 CPS1P31327 1500 aa18.23■□□□□ 0.51
TFRC-208ENST00000464011 PKD2Q13563 968 aa18.23■□□□□ 0.51
TFRC-208ENST00000464011 PIP4K2BP78356 416 aa18.22■□□□□ 0.51
TFRC-208ENST00000464011 TOM1O60784 492 aa18.21■□□□□ 0.51
TFRC-208ENST00000464011 CEP170BQ9Y4F5 1589 aaPredicted RBP18.21■□□□□ 0.51
TFRC-208ENST00000464011 ALKQ9UM73 1620 aa18.2■□□□□ 0.5
TFRC-208ENST00000464011 ESF1Q9H501 851 aaKnown RBP18.19■□□□□ 0.5
TFRC-208ENST00000464011 MLH3Q9UHC1 1453 aa18.19■□□□□ 0.5
TFRC-208ENST00000464011 EFCAB2Q5VUJ9 269 aa18.15■□□□□ 0.5
TFRC-208ENST00000464011 PTPRKQ15262 1439 aa18.15■□□□□ 0.5
TFRC-208ENST00000464011 CDK13Q14004 1512 aaKnown RBP18.14■□□□□ 0.49
TFRC-208ENST00000464011 RGS17Q9UGC6 210 aaPredicted RBP18.13■□□□□ 0.49
TFRC-208ENST00000464011 POLR1AO95602 1720 aaPredicted RBP18.12■□□□□ 0.49
TFRC-208ENST00000464011 AFAP1Q8N556 730 aa18.12■□□□□ 0.49
TFRC-208ENST00000464011 SHANK2Q9UPX8 1470 aa18.11■□□□□ 0.49
TFRC-208ENST00000464011 NEURL4Q96JN8 1562 aa18.1■□□□□ 0.49
TFRC-208ENST00000464011 ARHGAP5Q13017 1502 aa18.09■□□□□ 0.49
TFRC-208ENST00000464011 KIDINS220Q9ULH0 1771 aa18.09■□□□□ 0.49
TFRC-208ENST00000464011 ZMYM3Q14202 1370 aa18.08■□□□□ 0.49
TFRC-208ENST00000464011 KIF14Q15058 1648 aa18.08■□□□□ 0.48
TFRC-208ENST00000464011 CLTCQ00610 1675 aaKnown RBP18.06■□□□□ 0.48
TFRC-208ENST00000464011 VWDEQ8N2E2 1590 aa18.06■□□□□ 0.48
TFRC-208ENST00000464011 ABCC1P33527 1531 aa18.06■□□□□ 0.48
TFRC-208ENST00000464011 ITSN2Q9NZM3 1697 aa18.06■□□□□ 0.48
TFRC-208ENST00000464011 MYT1LQ9UL68 1186 aa18.05■□□□□ 0.48
TFRC-208ENST00000464011 DNMT1P26358 1616 aaKnown RBP18.05■□□□□ 0.48
TFRC-208ENST00000464011 RNF17Q9BXT8 1623 aaKnown RBP18.05■□□□□ 0.48
TFRC-208ENST00000464011 SETD1AO15047 1707 aaKnown RBP18.04■□□□□ 0.48
TFRC-208ENST00000464011 A2ML1A8K2U0 1454 aa18.03■□□□□ 0.48
TFRC-208ENST00000464011 CDC42BPBQ9Y5S2 1711 aa18.02■□□□□ 0.48
TFRC-208ENST00000464011 CNKSR2Q8WXI2 1034 aa18■□□□□ 0.47
TFRC-208ENST00000464011 SYNMO15061 1565 aa17.99■□□□□ 0.47
TFRC-208ENST00000464011 PREX2Q70Z35 1606 aa17.98■□□□□ 0.47
TFRC-208ENST00000464011 PLXNC1O60486 1568 aa17.97■□□□□ 0.47
TFRC-208ENST00000464011 POTEAQ6S8J7 498 aa17.97■□□□□ 0.47
TFRC-208ENST00000464011 TROQ12816 1431 aaPredicted RBP17.94■□□□□ 0.46
TFRC-208ENST00000464011 STRCP1A6NGW2 1772 aa17.93■□□□□ 0.46
TFRC-208ENST00000464011 DEPDC5O75140 1603 aa17.93■□□□□ 0.46
TFRC-208ENST00000464011 SAMD9LQ8IVG5 1584 aa17.92■□□□□ 0.46
TFRC-208ENST00000464011 LRRC7Q96NW7 1537 aa17.92■□□□□ 0.46
TFRC-208ENST00000464011 MED14O60244 1454 aa17.91■□□□□ 0.46
TFRC-208ENST00000464011 CLIP1P30622 1438 aa17.89■□□□□ 0.46
TFRC-208ENST00000464011 IQGAP1P46940 1657 aa17.89■□□□□ 0.45
TFRC-208ENST00000464011 RANGAP1P46060 587 aaPredicted RBP17.87■□□□□ 0.45
TFRC-208ENST00000464011 CDK11AQ9UQ88 783 aaPredicted RBP17.87■□□□□ 0.45
TFRC-208ENST00000464011 NPHP4O75161 1426 aaPredicted RBP17.86■□□□□ 0.45
TFRC-208ENST00000464011 INO80Q9ULG1 1556 aaPredicted RBP17.86■□□□□ 0.45
TFRC-208ENST00000464011 ATP7AQ04656 1500 aa17.85■□□□□ 0.45
TFRC-208ENST00000464011 SRCAPQ6ZRS2 3230 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms