RNA–Protein interactions for RNA: ENST00000463048.3

NUP43-205, Transcript of nucleoporin 43, humanhuman

TSL 3

Gene NUP43, Length 523 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-205ENST00000463048 GPATCH8Q9UKJ3 1502 aaKnown RBP31.59■■■□□ 2.65
NUP43-205ENST00000463048 EFCAB2Q5VUJ9 269 aa31.58■■■□□ 2.65
NUP43-205ENST00000463048 ZNF777Q9ULD5 760 aaPredicted RBP31.58■■■□□ 2.65
NUP43-205ENST00000463048 NEO1Q92859 1461 aa31.58■■■□□ 2.65
NUP43-205ENST00000463048 COL17A1Q9UMD9 1497 aaPredicted RBP31.58■■■□□ 2.65
NUP43-205ENST00000463048 CFAP74Q9C0B2 1584 aa31.57■■■□□ 2.64
NUP43-205ENST00000463048 AKNAQ7Z591 1439 aa31.57■■■□□ 2.64
NUP43-205ENST00000463048 CFDP1Q9UEE9 299 aaPredicted RBP31.53■■■□□ 2.64
NUP43-205ENST00000463048 ARAP3Q8WWN8 1544 aa31.53■■■□□ 2.64
NUP43-205ENST00000463048 ITSN2Q9NZM3 1697 aa31.5■■■□□ 2.63
NUP43-205ENST00000463048 ADGRL1O94910 1474 aa31.49■■■□□ 2.63
NUP43-205ENST00000463048 PHLDB1Q86UU1 1377 aa31.48■■■□□ 2.63
NUP43-205ENST00000463048 RAPGEF3O95398 923 aa31.48■■■□□ 2.63
NUP43-205ENST00000463048 SCAPERQ9BY12 1400 aa31.46■■■□□ 2.63
NUP43-205ENST00000463048 SAMD9LQ8IVG5 1584 aa31.43■■■□□ 2.62
NUP43-205ENST00000463048 ZNF644Q9H582 1327 aaPredicted RBP31.43■■■□□ 2.62
NUP43-205ENST00000463048 DENND4BO75064 1496 aaPredicted RBP31.42■■■□□ 2.62
NUP43-205ENST00000463048 MYOM3Q5VTT5 1437 aa31.39■■■□□ 2.62
NUP43-205ENST00000463048 ABCC1P33527 1531 aa31.38■■■□□ 2.61
NUP43-205ENST00000463048 HNRNPMP52272 730 aaKnown RBP eCLIP31.37■■■□□ 2.61
NUP43-205ENST00000463048 FRMPD1Q5SYB0 1578 aa31.37■■■□□ 2.61
NUP43-205ENST00000463048 ARHGEF12Q9NZN5 1544 aa31.36■■■□□ 2.61
NUP43-205ENST00000463048 RICTORQ6R327 1708 aa31.35■■■□□ 2.61
NUP43-205ENST00000463048 SYCP2Q9BX26 1530 aa31.35■■■□□ 2.61
NUP43-205ENST00000463048 POGZQ7Z3K3 1410 aa31.32■■■□□ 2.61
NUP43-205ENST00000463048 AFAP1Q8N556 730 aa31.32■■■□□ 2.6
NUP43-205ENST00000463048 CAMSAP2Q08AD1 1489 aa31.32■■■□□ 2.6
NUP43-205ENST00000463048 TRAPPC8Q9Y2L5 1435 aa31.31■■■□□ 2.6
NUP43-205ENST00000463048 MYT1LQ9UL68 1186 aa31.29■■■□□ 2.6
NUP43-205ENST00000463048 PLEKHH2Q8IVE3 1493 aa31.27■■■□□ 2.6
NUP43-205ENST00000463048 ZNF518AQ6AHZ1 1483 aa31.26■■■□□ 2.59
NUP43-205ENST00000463048 FGD6Q6ZV73 1430 aa31.25■■■□□ 2.59
NUP43-205ENST00000463048 MIA2Q96PC5 1412 aa31.25■■■□□ 2.59
NUP43-205ENST00000463048 PTPN23Q9H3S7 1636 aa31.24■■■□□ 2.59
NUP43-205ENST00000463048 KIAA1107Q9UPP5 1409 aa31.23■■■□□ 2.59
NUP43-205ENST00000463048 FAM50AQ14320 339 aaKnown RBP31.19■■■□□ 2.58
NUP43-205ENST00000463048 ZMYM4Q5VZL5 1548 aa31.19■■■□□ 2.58
NUP43-205ENST00000463048 MBD5Q9P267 1494 aa31.18■■■□□ 2.58
NUP43-205ENST00000463048 KDM5CP41229 1560 aa31.17■■■□□ 2.58
NUP43-205ENST00000463048 YEATS2Q9ULM3 1422 aa31.17■■■□□ 2.58
NUP43-205ENST00000463048 ZFYVE16Q7Z3T8 1539 aa31.15■■■□□ 2.58
NUP43-205ENST00000463048 HECW2Q9P2P5 1572 aa31.14■■■□□ 2.58
NUP43-205ENST00000463048 SPAG9O60271 1321 aaKnown RBP31.14■■■□□ 2.58
NUP43-205ENST00000463048 CCDC141Q6ZP82 1450 aa31.12■■■□□ 2.57
NUP43-205ENST00000463048 TCOF1Q13428 1488 aaKnown RBP31.11■■■□□ 2.57
NUP43-205ENST00000463048 ARHGEF40Q8TER5 1519 aa31.11■■■□□ 2.57
NUP43-205ENST00000463048 ARHGEF5Q12774 1597 aa31.09■■■□□ 2.57
NUP43-205ENST00000463048 MAGI2Q86UL8 1455 aa31.08■■■□□ 2.57
NUP43-205ENST00000463048 KIDINS220Q9ULH0 1771 aa31.07■■■□□ 2.56
NUP43-205ENST00000463048 MLH3Q9UHC1 1453 aa31.07■■■□□ 2.56
NUP43-205ENST00000463048 ABCA6Q8N139 1617 aa31.06■■■□□ 2.56
NUP43-205ENST00000463048 ATP7AQ04656 1500 aa31.05■■■□□ 2.56
NUP43-205ENST00000463048 TSPY4P0CV99 314 aa31.04■■■□□ 2.56
NUP43-205ENST00000463048 TSPY10P0CW01 314 aa31.04■■■□□ 2.56
NUP43-205ENST00000463048 RSPH4AQ5TD94 716 aa31.04■■■□□ 2.56
NUP43-205ENST00000463048 INO80Q9ULG1 1556 aaPredicted RBP31.04■■■□□ 2.56
NUP43-205ENST00000463048 DIP2CQ9Y2E4 1556 aa31.03■■■□□ 2.56
NUP43-205ENST00000463048 ARID4BQ4LE39 1312 aaPredicted RBP31.02■■■□□ 2.56
NUP43-205ENST00000463048 ABCC5O15440 1437 aa31.01■■■□□ 2.55
NUP43-205ENST00000463048 ITGAEP38570 1179 aa31.01■■■□□ 2.55
NUP43-205ENST00000463048 DAPK1P53355 1430 aa31■■■□□ 2.55
NUP43-205ENST00000463048 DNMT1P26358 1616 aaKnown RBP31■■■□□ 2.55
NUP43-205ENST00000463048 ATP10AO60312 1499 aa31■■■□□ 2.55
NUP43-205ENST00000463048 CHIC2Q9UKJ5 165 aa30.98■■■□□ 2.55
NUP43-205ENST00000463048 C9orf84Q5VXU9 1444 aa30.98■■■□□ 2.55
NUP43-205ENST00000463048 CROCC2H7BZ55 1655 aa30.97■■■□□ 2.55
NUP43-205ENST00000463048 SIGLEC1Q9BZZ2 1709 aa30.96■■■□□ 2.55
NUP43-205ENST00000463048 RRBP1Q9P2E9 1410 aaKnown RBP30.94■■■□□ 2.54
NUP43-205ENST00000463048 RTEL1-TNFRSF6BF6WH68 1400 aa30.93■■■□□ 2.54
NUP43-205ENST00000463048 MLECQ14165 292 aa30.91■■■□□ 2.54
NUP43-205ENST00000463048 MAST1Q9Y2H9 1570 aa30.91■■■□□ 2.54
NUP43-205ENST00000463048 ADGBQ8N7X0 1667 aa30.89■■■□□ 2.54
NUP43-205ENST00000463048 SHANK2Q9UPX8 1470 aa30.88■■■□□ 2.53
NUP43-205ENST00000463048 A2MP01023 1474 aa30.87■■■□□ 2.53
NUP43-205ENST00000463048 RRP7BPQ9NSQ0 103 aa30.86■■■□□ 2.53
NUP43-205ENST00000463048 PTPRKQ15262 1439 aa30.85■■■□□ 2.53
NUP43-205ENST00000463048 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.83■■■□□ 2.53
NUP43-205ENST00000463048 REREQ9P2R6 1566 aa30.82■■■□□ 2.52
NUP43-205ENST00000463048 PLXNC1O60486 1568 aa30.8■■■□□ 2.52
NUP43-205ENST00000463048 ANKRD30AQ9BXX3 1397 aa30.79■■■□□ 2.52
NUP43-205ENST00000463048 KIF15Q9NS87 1388 aa30.79■■■□□ 2.52
NUP43-205ENST00000463048 BCORL1Q5H9F3 1711 aa30.78■■■□□ 2.52
NUP43-205ENST00000463048 KDM4FA0A1W2PPD8 638 aa30.78■■■□□ 2.52
NUP43-205ENST00000463048 DHX29Q7Z478 1369 aaKnown RBP30.78■■■□□ 2.52
NUP43-205ENST00000463048 NCOA1Q15788 1441 aa30.73■■■□□ 2.51
NUP43-205ENST00000463048 AGLP35573 1532 aa30.73■■■□□ 2.51
NUP43-205ENST00000463048 KIF3BO15066 747 aa30.73■■■□□ 2.51
NUP43-205ENST00000463048 ADGRL2O95490 1459 aa30.72■■■□□ 2.51
NUP43-205ENST00000463048 DUOX2Q9NRD8 1548 aa30.72■■■□□ 2.51
NUP43-205ENST00000463048 GGT6Q6P531 493 aa30.71■■■□□ 2.51
NUP43-205ENST00000463048 MADDQ8WXG6 1647 aa30.69■■■□□ 2.5
NUP43-205ENST00000463048 ADAMTSL3P82987 1691 aa30.68■■■□□ 2.5
NUP43-205ENST00000463048 PLPPR3Q6T4P5 718 aa30.67■■■□□ 2.5
NUP43-205ENST00000463048 FER1L4A9Z1Z3 1794 aa30.64■■■□□ 2.5
NUP43-205ENST00000463048 RIMS1Q86UR5 1692 aaKnown RBP30.64■■■□□ 2.5
NUP43-205ENST00000463048 ROCK1Q13464 1354 aa30.63■■■□□ 2.49
NUP43-205ENST00000463048 ESF1Q9H501 851 aaKnown RBP30.61■■■□□ 2.49
NUP43-205ENST00000463048 ERBINQ96RT1 1412 aa30.6■■■□□ 2.49
NUP43-205ENST00000463048 EIF2AK4Q9P2K8 1649 aaKnown RBP30.59■■■□□ 2.49
NUP43-205ENST00000463048 ANKRD50Q9ULJ7 1429 aa30.58■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms