RNA–Protein interactions for RNA: ENST00000462743.1

HPS1-206, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 3

Gene HPS1, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-206ENST00000462743 SCAPERQ9BY12 1400 aa19.07■□□□□ 0.64
HPS1-206ENST00000462743 ADGRL1O94910 1474 aa19.06■□□□□ 0.64
HPS1-206ENST00000462743 CDC42BPAQ5VT25 1732 aa19.05■□□□□ 0.64
HPS1-206ENST00000462743 ARHGAP5Q13017 1502 aa19.05■□□□□ 0.64
HPS1-206ENST00000462743 PREX2Q70Z35 1606 aa19.05■□□□□ 0.64
HPS1-206ENST00000462743 RICTORQ6R327 1708 aa19.04■□□□□ 0.64
HPS1-206ENST00000462743 CCNB3Q8WWL7 1395 aa19.04■□□□□ 0.64
HPS1-206ENST00000462743 LRRC9Q6ZRR7 1453 aa19.03■□□□□ 0.64
HPS1-206ENST00000462743 FRMPD1Q5SYB0 1578 aa19.03■□□□□ 0.64
HPS1-206ENST00000462743 APLP2Q06481 763 aa19.01■□□□□ 0.63
HPS1-206ENST00000462743 KANK4Q5T7N3 995 aaPredicted RBP19.01■□□□□ 0.63
HPS1-206ENST00000462743 CFDP1Q9UEE9 299 aaPredicted RBP19.01■□□□□ 0.63
HPS1-206ENST00000462743 MAGI2Q86UL8 1455 aa19.01■□□□□ 0.63
HPS1-206ENST00000462743 POGZQ7Z3K3 1410 aa19■□□□□ 0.63
HPS1-206ENST00000462743 ZMYM4Q5VZL5 1548 aa19■□□□□ 0.63
HPS1-206ENST00000462743 SUPT6HQ7KZ85 1726 aaKnown RBP18.99■□□□□ 0.63
HPS1-206ENST00000462743 NCOA2Q15596 1464 aa18.98■□□□□ 0.63
HPS1-206ENST00000462743 KIAA1107Q9UPP5 1409 aa18.98■□□□□ 0.63
HPS1-206ENST00000462743 ARHGEF12Q9NZN5 1544 aa18.96■□□□□ 0.63
HPS1-206ENST00000462743 KDM4FA0A1W2PPD8 638 aa18.96■□□□□ 0.63
HPS1-206ENST00000462743 AFAP1Q8N556 730 aa18.96■□□□□ 0.63
HPS1-206ENST00000462743 ZNF518AQ6AHZ1 1483 aa18.96■□□□□ 0.63
HPS1-206ENST00000462743 PLEKHH2Q8IVE3 1493 aa18.96■□□□□ 0.63
HPS1-206ENST00000462743 ABCC1P33527 1531 aa18.95■□□□□ 0.62
HPS1-206ENST00000462743 ZNF777Q9ULD5 760 aaPredicted RBP18.94■□□□□ 0.62
HPS1-206ENST00000462743 TRAPPC8Q9Y2L5 1435 aa18.93■□□□□ 0.62
HPS1-206ENST00000462743 ITSN2Q9NZM3 1697 aa18.93■□□□□ 0.62
HPS1-206ENST00000462743 KDM5CP41229 1560 aa18.93■□□□□ 0.62
HPS1-206ENST00000462743 SAMD9LQ8IVG5 1584 aa18.93■□□□□ 0.62
HPS1-206ENST00000462743 MLH3Q9UHC1 1453 aa18.91■□□□□ 0.62
HPS1-206ENST00000462743 HNRNPMP52272 730 aaKnown RBP eCLIP18.91■□□□□ 0.62
HPS1-206ENST00000462743 RSPH4AQ5TD94 716 aa18.9■□□□□ 0.62
HPS1-206ENST00000462743 YEATS2Q9ULM3 1422 aa18.9■□□□□ 0.62
HPS1-206ENST00000462743 ARHGEF40Q8TER5 1519 aa18.9■□□□□ 0.62
HPS1-206ENST00000462743 ZNF644Q9H582 1327 aaPredicted RBP18.89■□□□□ 0.61
HPS1-206ENST00000462743 ZFYVE16Q7Z3T8 1539 aa18.89■□□□□ 0.61
HPS1-206ENST00000462743 ATP10AO60312 1499 aa18.87■□□□□ 0.61
HPS1-206ENST00000462743 MIA2Q96PC5 1412 aa18.87■□□□□ 0.61
HPS1-206ENST00000462743 MBD5Q9P267 1494 aa18.87■□□□□ 0.61
HPS1-206ENST00000462743 MYOM3Q5VTT5 1437 aa18.85■□□□□ 0.61
HPS1-206ENST00000462743 AEBP2Q6ZN18 517 aaPredicted RBP18.85■□□□□ 0.61
HPS1-206ENST00000462743 SYCP2Q9BX26 1530 aa18.84■□□□□ 0.61
HPS1-206ENST00000462743 HECW2Q9P2P5 1572 aa18.84■□□□□ 0.61
HPS1-206ENST00000462743 SPAG9O60271 1321 aaKnown RBP18.83■□□□□ 0.61
HPS1-206ENST00000462743 KIDINS220Q9ULH0 1771 aa18.82■□□□□ 0.6
HPS1-206ENST00000462743 MYT1LQ9UL68 1186 aa18.81■□□□□ 0.6
HPS1-206ENST00000462743 CAMSAP2Q08AD1 1489 aa18.81■□□□□ 0.6
HPS1-206ENST00000462743 C9orf84Q5VXU9 1444 aa18.81■□□□□ 0.6
HPS1-206ENST00000462743 ARID4BQ4LE39 1312 aaPredicted RBP18.8■□□□□ 0.6
HPS1-206ENST00000462743 RTEL1-TNFRSF6BF6WH68 1400 aa18.8■□□□□ 0.6
HPS1-206ENST00000462743 REREQ9P2R6 1566 aa18.8■□□□□ 0.6
HPS1-206ENST00000462743 DIP2CQ9Y2E4 1556 aa18.78■□□□□ 0.6
HPS1-206ENST00000462743 ADAMTSL3P82987 1691 aa18.78■□□□□ 0.6
HPS1-206ENST00000462743 BCORL1Q5H9F3 1711 aa18.77■□□□□ 0.6
HPS1-206ENST00000462743 ARHGEF5Q12774 1597 aa18.77■□□□□ 0.6
HPS1-206ENST00000462743 AGLP35573 1532 aa18.75■□□□□ 0.59
HPS1-206ENST00000462743 ABCA6Q8N139 1617 aa18.75■□□□□ 0.59
HPS1-206ENST00000462743 SIGLEC1Q9BZZ2 1709 aa18.75■□□□□ 0.59
HPS1-206ENST00000462743 CCDC141Q6ZP82 1450 aa18.75■□□□□ 0.59
HPS1-206ENST00000462743 ATP7AQ04656 1500 aa18.74■□□□□ 0.59
HPS1-206ENST00000462743 INO80Q9ULG1 1556 aaPredicted RBP18.74■□□□□ 0.59
HPS1-206ENST00000462743 TSPY4P0CV99 314 aa18.74■□□□□ 0.59
HPS1-206ENST00000462743 TSPY10P0CW01 314 aa18.74■□□□□ 0.59
HPS1-206ENST00000462743 FGD6Q6ZV73 1430 aa18.73■□□□□ 0.59
HPS1-206ENST00000462743 TCOF1Q13428 1488 aaKnown RBP18.72■□□□□ 0.59
HPS1-206ENST00000462743 PTPN23Q9H3S7 1636 aa18.7■□□□□ 0.58
HPS1-206ENST00000462743 A2MP01023 1474 aa18.68■□□□□ 0.58
HPS1-206ENST00000462743 DHX29Q7Z478 1369 aaKnown RBP18.68■□□□□ 0.58
HPS1-206ENST00000462743 MLECQ14165 292 aa18.67■□□□□ 0.58
HPS1-206ENST00000462743 MAST1Q9Y2H9 1570 aa18.67■□□□□ 0.58
HPS1-206ENST00000462743 ADGBQ8N7X0 1667 aa18.66■□□□□ 0.58
HPS1-206ENST00000462743 PTPRMP28827 1452 aa18.66■□□□□ 0.58
HPS1-206ENST00000462743 MADDQ8WXG6 1647 aa18.66■□□□□ 0.58
HPS1-206ENST00000462743 ABCC5O15440 1437 aa18.66■□□□□ 0.58
HPS1-206ENST00000462743 PLXNC1O60486 1568 aa18.65■□□□□ 0.58
HPS1-206ENST00000462743 PPP6R1Q9UPN7 881 aa18.65■□□□□ 0.58
HPS1-206ENST00000462743 SHANK2Q9UPX8 1470 aa18.61■□□□□ 0.57
HPS1-206ENST00000462743 DAPK1P53355 1430 aa18.61■□□□□ 0.57
HPS1-206ENST00000462743 DNMT1P26358 1616 aaKnown RBP18.6■□□□□ 0.57
HPS1-206ENST00000462743 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.6■□□□□ 0.57
HPS1-206ENST00000462743 FER1L4A9Z1Z3 1794 aa18.6■□□□□ 0.57
HPS1-206ENST00000462743 RIMS1Q86UR5 1692 aaKnown RBP18.6■□□□□ 0.57
HPS1-206ENST00000462743 SETD1BQ9UPS6 1966 aaKnown RBP18.59■□□□□ 0.57
HPS1-206ENST00000462743 PPARGC1BQ86YN6 1023 aaKnown RBP18.59■□□□□ 0.57
HPS1-206ENST00000462743 CNTLNQ9NXG0 1405 aa18.57■□□□□ 0.56
HPS1-206ENST00000462743 FAM50AQ14320 339 aaKnown RBP18.57■□□□□ 0.56
HPS1-206ENST00000462743 KIF3BO15066 747 aa18.56■□□□□ 0.56
HPS1-206ENST00000462743 ESF1Q9H501 851 aaKnown RBP18.56■□□□□ 0.56
HPS1-206ENST00000462743 CROCC2H7BZ55 1655 aa18.56■□□□□ 0.56
HPS1-206ENST00000462743 GGT6Q6P531 493 aa18.55■□□□□ 0.56
HPS1-206ENST00000462743 NCOA1Q15788 1441 aa18.54■□□□□ 0.56
HPS1-206ENST00000462743 ANKRD30AQ9BXX3 1397 aa18.54■□□□□ 0.56
HPS1-206ENST00000462743 DUOX2Q9NRD8 1548 aa18.53■□□□□ 0.56
HPS1-206ENST00000462743 KIF15Q9NS87 1388 aa18.52■□□□□ 0.55
HPS1-206ENST00000462743 ADGRL2O95490 1459 aa18.52■□□□□ 0.55
HPS1-206ENST00000462743 RRBP1Q9P2E9 1410 aaKnown RBP18.51■□□□□ 0.55
HPS1-206ENST00000462743 CEBPAP49715 358 aaPredicted RBP18.51■□□□□ 0.55
HPS1-206ENST00000462743 RRP7BPQ9NSQ0 103 aa18.51■□□□□ 0.55
HPS1-206ENST00000462743 CHIC2Q9UKJ5 165 aa18.51■□□□□ 0.55
HPS1-206ENST00000462743 ZMYM3Q14202 1370 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms