RNA–Protein interactions for RNA: ENST00000462613.1

SF3B1-206, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 3

Gene SF3B1, Length 141 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-206ENST00000462613 FANCAO15360 1455 aa9.91□□□□□ -0.82
SF3B1-206ENST00000462613 PLCH2O75038 1416 aa9.91□□□□□ -0.82
SF3B1-206ENST00000462613 EFCAB2Q5VUJ9 269 aa9.9□□□□□ -0.82
SF3B1-206ENST00000462613 NCOA2Q15596 1464 aa9.89□□□□□ -0.83
SF3B1-206ENST00000462613 ADGRL1O94910 1474 aa9.87□□□□□ -0.83
SF3B1-206ENST00000462613 PLEKHH2Q8IVE3 1493 aa9.87□□□□□ -0.83
SF3B1-206ENST00000462613 CFDP1Q9UEE9 299 aaPredicted RBP9.87□□□□□ -0.83
SF3B1-206ENST00000462613 AKNAQ7Z591 1439 aa9.87□□□□□ -0.83
SF3B1-206ENST00000462613 KANK4Q5T7N3 995 aaPredicted RBP9.86□□□□□ -0.83
SF3B1-206ENST00000462613 GPATCH8Q9UKJ3 1502 aaKnown RBP9.86□□□□□ -0.83
SF3B1-206ENST00000462613 DENND4BO75064 1496 aaPredicted RBP9.85□□□□□ -0.83
SF3B1-206ENST00000462613 RICTORQ6R327 1708 aa9.85□□□□□ -0.83
SF3B1-206ENST00000462613 ZNF777Q9ULD5 760 aaPredicted RBP9.85□□□□□ -0.83
SF3B1-206ENST00000462613 ABCC1P33527 1531 aa9.84□□□□□ -0.83
SF3B1-206ENST00000462613 SAMD9LQ8IVG5 1584 aa9.84□□□□□ -0.83
SF3B1-206ENST00000462613 MYOM3Q5VTT5 1437 aa9.83□□□□□ -0.84
SF3B1-206ENST00000462613 SCAPERQ9BY12 1400 aa9.83□□□□□ -0.84
SF3B1-206ENST00000462613 ZNF518AQ6AHZ1 1483 aa9.83□□□□□ -0.84
SF3B1-206ENST00000462613 MIA2Q96PC5 1412 aa9.82□□□□□ -0.84
SF3B1-206ENST00000462613 MYT1LQ9UL68 1186 aa9.82□□□□□ -0.84
SF3B1-206ENST00000462613 SYCP2Q9BX26 1530 aa9.82□□□□□ -0.84
SF3B1-206ENST00000462613 PTPN23Q9H3S7 1636 aa9.81□□□□□ -0.84
SF3B1-206ENST00000462613 POGZQ7Z3K3 1410 aa9.81□□□□□ -0.84
SF3B1-206ENST00000462613 KIAA1107Q9UPP5 1409 aa9.81□□□□□ -0.84
SF3B1-206ENST00000462613 CAMSAP2Q08AD1 1489 aa9.8□□□□□ -0.84
SF3B1-206ENST00000462613 RSPH4AQ5TD94 716 aa9.8□□□□□ -0.84
SF3B1-206ENST00000462613 ZMYM4Q5VZL5 1548 aa9.8□□□□□ -0.84
SF3B1-206ENST00000462613 HECW2Q9P2P5 1572 aa9.8□□□□□ -0.84
SF3B1-206ENST00000462613 FRMPD1Q5SYB0 1578 aa9.79□□□□□ -0.84
SF3B1-206ENST00000462613 MAGI2Q86UL8 1455 aa9.79□□□□□ -0.84
SF3B1-206ENST00000462613 COL17A1Q9UMD9 1497 aaPredicted RBP9.79□□□□□ -0.84
SF3B1-206ENST00000462613 RAPGEF3O95398 923 aa9.78□□□□□ -0.84
SF3B1-206ENST00000462613 FGD6Q6ZV73 1430 aa9.78□□□□□ -0.84
SF3B1-206ENST00000462613 KDM5CP41229 1560 aa9.78□□□□□ -0.84
SF3B1-206ENST00000462613 ARHGEF5Q12774 1597 aa9.78□□□□□ -0.84
SF3B1-206ENST00000462613 ZFYVE16Q7Z3T8 1539 aa9.77□□□□□ -0.84
SF3B1-206ENST00000462613 CCDC141Q6ZP82 1450 aa9.77□□□□□ -0.85
SF3B1-206ENST00000462613 CROCC2H7BZ55 1655 aa9.77□□□□□ -0.85
SF3B1-206ENST00000462613 ARHGEF40Q8TER5 1519 aa9.77□□□□□ -0.85
SF3B1-206ENST00000462613 TSPY4P0CV99 314 aa9.76□□□□□ -0.85
SF3B1-206ENST00000462613 TSPY10P0CW01 314 aa9.76□□□□□ -0.85
SF3B1-206ENST00000462613 HNRNPMP52272 730 aaKnown RBP eCLIP9.76□□□□□ -0.85
SF3B1-206ENST00000462613 PPARGC1BQ86YN6 1023 aaKnown RBP9.76□□□□□ -0.85
SF3B1-206ENST00000462613 ADGBQ8N7X0 1667 aa9.75□□□□□ -0.85
SF3B1-206ENST00000462613 FAM50AQ14320 339 aaKnown RBP9.75□□□□□ -0.85
SF3B1-206ENST00000462613 ATP7AQ04656 1500 aa9.75□□□□□ -0.85
SF3B1-206ENST00000462613 SPAG9O60271 1321 aaKnown RBP9.75□□□□□ -0.85
SF3B1-206ENST00000462613 KIDINS220Q9ULH0 1771 aa9.75□□□□□ -0.85
SF3B1-206ENST00000462613 DNMT1P26358 1616 aaKnown RBP9.74□□□□□ -0.85
SF3B1-206ENST00000462613 TRAPPC8Q9Y2L5 1435 aa9.74□□□□□ -0.85
SF3B1-206ENST00000462613 TCOF1Q13428 1488 aaKnown RBP9.74□□□□□ -0.85
SF3B1-206ENST00000462613 MLH3Q9UHC1 1453 aa9.74□□□□□ -0.85
SF3B1-206ENST00000462613 ARHGEF12Q9NZN5 1544 aa9.74□□□□□ -0.85
SF3B1-206ENST00000462613 AFAP1Q8N556 730 aa9.74□□□□□ -0.85
SF3B1-206ENST00000462613 INO80Q9ULG1 1556 aaPredicted RBP9.74□□□□□ -0.85
SF3B1-206ENST00000462613 ZNF644Q9H582 1327 aaPredicted RBP9.74□□□□□ -0.85
SF3B1-206ENST00000462613 MBD5Q9P267 1494 aa9.72□□□□□ -0.85
SF3B1-206ENST00000462613 MAST1Q9Y2H9 1570 aa9.72□□□□□ -0.85
SF3B1-206ENST00000462613 ABCA6Q8N139 1617 aa9.72□□□□□ -0.85
SF3B1-206ENST00000462613 RTEL1-TNFRSF6BF6WH68 1400 aa9.72□□□□□ -0.85
SF3B1-206ENST00000462613 C9orf84Q5VXU9 1444 aa9.72□□□□□ -0.85
SF3B1-206ENST00000462613 DIP2CQ9Y2E4 1556 aa9.71□□□□□ -0.85
SF3B1-206ENST00000462613 ARID4BQ4LE39 1312 aaPredicted RBP9.71□□□□□ -0.86
SF3B1-206ENST00000462613 ATP10AO60312 1499 aa9.71□□□□□ -0.86
SF3B1-206ENST00000462613 SHANK2Q9UPX8 1470 aa9.71□□□□□ -0.86
SF3B1-206ENST00000462613 REREQ9P2R6 1566 aa9.71□□□□□ -0.86
SF3B1-206ENST00000462613 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.7□□□□□ -0.86
SF3B1-206ENST00000462613 DAPK1P53355 1430 aa9.7□□□□□ -0.86
SF3B1-206ENST00000462613 PLXNC1O60486 1568 aa9.7□□□□□ -0.86
SF3B1-206ENST00000462613 RRBP1Q9P2E9 1410 aaKnown RBP9.69□□□□□ -0.86
SF3B1-206ENST00000462613 YEATS2Q9ULM3 1422 aa9.69□□□□□ -0.86
SF3B1-206ENST00000462613 BCORL1Q5H9F3 1711 aa9.68□□□□□ -0.86
SF3B1-206ENST00000462613 A2MP01023 1474 aa9.67□□□□□ -0.86
SF3B1-206ENST00000462613 ANKRD30AQ9BXX3 1397 aa9.67□□□□□ -0.86
SF3B1-206ENST00000462613 FER1L4A9Z1Z3 1794 aa9.67□□□□□ -0.86
SF3B1-206ENST00000462613 ABCC5O15440 1437 aa9.66□□□□□ -0.86
SF3B1-206ENST00000462613 ESF1Q9H501 851 aaKnown RBP9.66□□□□□ -0.86
SF3B1-206ENST00000462613 EIF2AK4Q9P2K8 1649 aaKnown RBP9.66□□□□□ -0.86
SF3B1-206ENST00000462613 AGLP35573 1532 aa9.66□□□□□ -0.86
SF3B1-206ENST00000462613 DUOX2Q9NRD8 1548 aa9.66□□□□□ -0.86
SF3B1-206ENST00000462613 ITGAEP38570 1179 aa9.65□□□□□ -0.86
SF3B1-206ENST00000462613 CHIC2Q9UKJ5 165 aa9.64□□□□□ -0.87
SF3B1-206ENST00000462613 ADGRL2O95490 1459 aa9.64□□□□□ -0.87
SF3B1-206ENST00000462613 KIF15Q9NS87 1388 aa9.63□□□□□ -0.87
SF3B1-206ENST00000462613 DHX29Q7Z478 1369 aaKnown RBP9.63□□□□□ -0.87
SF3B1-206ENST00000462613 SIGLEC1Q9BZZ2 1709 aa9.62□□□□□ -0.87
SF3B1-206ENST00000462613 ADAMTSL3P82987 1691 aa9.62□□□□□ -0.87
SF3B1-206ENST00000462613 RIMS1Q86UR5 1692 aaKnown RBP9.62□□□□□ -0.87
SF3B1-206ENST00000462613 ERBINQ96RT1 1412 aa9.62□□□□□ -0.87
SF3B1-206ENST00000462613 ROCK1Q13464 1354 aa9.62□□□□□ -0.87
SF3B1-206ENST00000462613 GCC2Q8IWJ2 1684 aa9.61□□□□□ -0.87
SF3B1-206ENST00000462613 MADDQ8WXG6 1647 aa9.61□□□□□ -0.87
SF3B1-206ENST00000462613 MLECQ14165 292 aa9.61□□□□□ -0.87
SF3B1-206ENST00000462613 RRP7BPQ9NSQ0 103 aa9.61□□□□□ -0.87
SF3B1-206ENST00000462613 NCOA1Q15788 1441 aa9.61□□□□□ -0.87
SF3B1-206ENST00000462613 ZC3H13Q5T200 1668 aaKnown RBP9.61□□□□□ -0.87
SF3B1-206ENST00000462613 KIF3BO15066 747 aa9.6□□□□□ -0.87
SF3B1-206ENST00000462613 MROH2AA6NES4 1674 aa9.6□□□□□ -0.87
SF3B1-206ENST00000462613 FAM135AQ9P2D6 1515 aa9.6□□□□□ -0.87
SF3B1-206ENST00000462613 RNF17Q9BXT8 1623 aaKnown RBP9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms