RNA–Protein interactions for RNA: ENST00000461903.1

HLA-A-205, Transcript of major histocompatibility complex, class I, A, humanhuman

Gene HLA-A, Length 1,352 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-205ENST00000461903 PPARGC1BQ86YN6 1023 aaKnown RBP34.71■■■■□ 3.15
HLA-A-205ENST00000461903 PLCH2O75038 1416 aa34.69■■■■□ 3.14
HLA-A-205ENST00000461903 ARAP3Q8WWN8 1544 aa34.68■■■■□ 3.14
HLA-A-205ENST00000461903 ARHGAP5Q13017 1502 aa34.67■■■■□ 3.14
HLA-A-205ENST00000461903 GPATCH8Q9UKJ3 1502 aaKnown RBP34.66■■■■□ 3.14
HLA-A-205ENST00000461903 CFAP74Q9C0B2 1584 aa34.66■■■■□ 3.14
HLA-A-205ENST00000461903 CDC42BPBQ9Y5S2 1711 aa34.65■■■■□ 3.14
HLA-A-205ENST00000461903 FANCAO15360 1455 aa34.61■■■■□ 3.13
HLA-A-205ENST00000461903 MYOM3Q5VTT5 1437 aa34.59■■■■□ 3.13
HLA-A-205ENST00000461903 PHLDB1Q86UU1 1377 aa34.57■■■■□ 3.13
HLA-A-205ENST00000461903 NEO1Q92859 1461 aa34.57■■■■□ 3.12
HLA-A-205ENST00000461903 EFCAB2Q5VUJ9 269 aa34.57■■■■□ 3.12
HLA-A-205ENST00000461903 CFDP1Q9UEE9 299 aaPredicted RBP34.57■■■■□ 3.12
HLA-A-205ENST00000461903 ILDR1Q86SU0 546 aaPredicted RBP34.54■■■■□ 3.12
HLA-A-205ENST00000461903 HECW2Q9P2P5 1572 aa34.52■■■■□ 3.12
HLA-A-205ENST00000461903 AKNAQ7Z591 1439 aa34.5■■■■□ 3.11
HLA-A-205ENST00000461903 MIA2Q96PC5 1412 aa34.5■■■■□ 3.11
HLA-A-205ENST00000461903 ZNF777Q9ULD5 760 aaPredicted RBP34.49■■■■□ 3.11
HLA-A-205ENST00000461903 SAMD9LQ8IVG5 1584 aa34.47■■■■□ 3.11
HLA-A-205ENST00000461903 FGD6Q6ZV73 1430 aa34.46■■■■□ 3.11
HLA-A-205ENST00000461903 ABCC1P33527 1531 aa34.44■■■■□ 3.1
HLA-A-205ENST00000461903 CAMSAP2Q08AD1 1489 aa34.43■■■■□ 3.1
HLA-A-205ENST00000461903 PLEKHH2Q8IVE3 1493 aa34.43■■■■□ 3.1
HLA-A-205ENST00000461903 PTPN23Q9H3S7 1636 aa34.41■■■■□ 3.1
HLA-A-205ENST00000461903 SYCP2Q9BX26 1530 aa34.38■■■■□ 3.09
HLA-A-205ENST00000461903 SCAPERQ9BY12 1400 aa34.37■■■■□ 3.09
HLA-A-205ENST00000461903 ZNF644Q9H582 1327 aaPredicted RBP34.35■■■■□ 3.09
HLA-A-205ENST00000461903 DENND4BO75064 1496 aaPredicted RBP34.34■■■■□ 3.09
HLA-A-205ENST00000461903 KIAA1107Q9UPP5 1409 aa34.33■■■■□ 3.09
HLA-A-205ENST00000461903 TCOF1Q13428 1488 aaKnown RBP34.33■■■■□ 3.09
HLA-A-205ENST00000461903 ARHGEF12Q9NZN5 1544 aa34.3■■■■□ 3.08
HLA-A-205ENST00000461903 POGZQ7Z3K3 1410 aa34.29■■■■□ 3.08
HLA-A-205ENST00000461903 RICTORQ6R327 1708 aa34.28■■■■□ 3.08
HLA-A-205ENST00000461903 HNRNPMP52272 730 aaKnown RBP eCLIP34.26■■■■□ 3.08
HLA-A-205ENST00000461903 FAM50AQ14320 339 aaKnown RBP34.26■■■■□ 3.08
HLA-A-205ENST00000461903 ZNF518AQ6AHZ1 1483 aa34.26■■■■□ 3.07
HLA-A-205ENST00000461903 RRBP1Q9P2E9 1410 aaKnown RBP34.26■■■■□ 3.07
HLA-A-205ENST00000461903 ARHGEF5Q12774 1597 aa34.24■■■■□ 3.07
HLA-A-205ENST00000461903 FRMPD1Q5SYB0 1578 aa34.24■■■■□ 3.07
HLA-A-205ENST00000461903 MBD5Q9P267 1494 aa34.23■■■■□ 3.07
HLA-A-205ENST00000461903 RAPGEF3O95398 923 aa34.23■■■■□ 3.07
HLA-A-205ENST00000461903 TRAPPC8Q9Y2L5 1435 aa34.22■■■■□ 3.07
HLA-A-205ENST00000461903 CCDC141Q6ZP82 1450 aa34.22■■■■□ 3.07
HLA-A-205ENST00000461903 KDM5CP41229 1560 aa34.18■■■■□ 3.06
HLA-A-205ENST00000461903 DNMT1P26358 1616 aaKnown RBP34.17■■■■□ 3.06
HLA-A-205ENST00000461903 RSPH4AQ5TD94 716 aa34.17■■■■□ 3.06
HLA-A-205ENST00000461903 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP34.16■■■■□ 3.06
HLA-A-205ENST00000461903 AFAP1Q8N556 730 aa34.16■■■■□ 3.06
HLA-A-205ENST00000461903 ZMYM4Q5VZL5 1548 aa34.16■■■■□ 3.06
HLA-A-205ENST00000461903 CROCC2H7BZ55 1655 aa34.13■■■■□ 3.05
HLA-A-205ENST00000461903 DAPK1P53355 1430 aa34.12■■■■□ 3.05
HLA-A-205ENST00000461903 MYT1LQ9UL68 1186 aa34.1■■■■□ 3.05
HLA-A-205ENST00000461903 ADAMTSL3P82987 1691 aa34.09■■■■□ 3.05
HLA-A-205ENST00000461903 SPAG9O60271 1321 aaKnown RBP34.09■■■■□ 3.05
HLA-A-205ENST00000461903 ABCC5O15440 1437 aa34.08■■■■□ 3.05
HLA-A-205ENST00000461903 TSPY4P0CV99 314 aa34.08■■■■□ 3.05
HLA-A-205ENST00000461903 TSPY10P0CW01 314 aa34.08■■■■□ 3.05
HLA-A-205ENST00000461903 MAGI2Q86UL8 1455 aa34.07■■■■□ 3.04
HLA-A-205ENST00000461903 SHANK2Q9UPX8 1470 aa34.07■■■■□ 3.04
HLA-A-205ENST00000461903 INO80Q9ULG1 1556 aaPredicted RBP34.06■■■■□ 3.04
HLA-A-205ENST00000461903 MLH3Q9UHC1 1453 aa34.06■■■■□ 3.04
HLA-A-205ENST00000461903 ATP7AQ04656 1500 aa34.05■■■■□ 3.04
HLA-A-205ENST00000461903 ZFYVE16Q7Z3T8 1539 aa34.05■■■■□ 3.04
HLA-A-205ENST00000461903 MAST1Q9Y2H9 1570 aa34.05■■■■□ 3.04
HLA-A-205ENST00000461903 PTPRMP28827 1452 aa34.04■■■■□ 3.04
HLA-A-205ENST00000461903 C9orf84Q5VXU9 1444 aa34.04■■■■□ 3.04
HLA-A-205ENST00000461903 KIDINS220Q9ULH0 1771 aa34.02■■■■□ 3.04
HLA-A-205ENST00000461903 ITGAEP38570 1179 aa34.01■■■■□ 3.04
HLA-A-205ENST00000461903 ARHGEF40Q8TER5 1519 aa34.01■■■■□ 3.04
HLA-A-205ENST00000461903 RTEL1-TNFRSF6BF6WH68 1400 aa34■■■■□ 3.03
HLA-A-205ENST00000461903 ADGBQ8N7X0 1667 aa33.98■■■■□ 3.03
HLA-A-205ENST00000461903 BCORL1Q5H9F3 1711 aa33.97■■■■□ 3.03
HLA-A-205ENST00000461903 ABCA6Q8N139 1617 aa33.96■■■■□ 3.03
HLA-A-205ENST00000461903 YEATS2Q9ULM3 1422 aa33.96■■■■□ 3.03
HLA-A-205ENST00000461903 DIP2CQ9Y2E4 1556 aa33.94■■■■□ 3.02
HLA-A-205ENST00000461903 PLXNC1O60486 1568 aa33.93■■■■□ 3.02
HLA-A-205ENST00000461903 CHIC2Q9UKJ5 165 aa33.93■■■■□ 3.02
HLA-A-205ENST00000461903 PTPRKQ15262 1439 aa33.91■■■■□ 3.02
HLA-A-205ENST00000461903 MADDQ8WXG6 1647 aa33.9■■■■□ 3.02
HLA-A-205ENST00000461903 ADGRL2O95490 1459 aa33.89■■■■□ 3.02
HLA-A-205ENST00000461903 ANKRD30AQ9BXX3 1397 aa33.89■■■■□ 3.02
HLA-A-205ENST00000461903 ATP10AO60312 1499 aa33.87■■■■□ 3.01
HLA-A-205ENST00000461903 FBXO41Q8TF61 875 aa33.84■■■■□ 3.01
HLA-A-205ENST00000461903 ROCK1Q13464 1354 aa33.83■■■■□ 3.01
HLA-A-205ENST00000461903 ARID4BQ4LE39 1312 aaPredicted RBP33.82■■■■□ 3
HLA-A-205ENST00000461903 KIF15Q9NS87 1388 aa33.82■■■■□ 3
HLA-A-205ENST00000461903 NCOA1Q15788 1441 aa33.82■■■■□ 3
HLA-A-205ENST00000461903 REREQ9P2R6 1566 aa33.81■■■■□ 3
HLA-A-205ENST00000461903 A2MP01023 1474 aa33.81■■■■□ 3
HLA-A-205ENST00000461903 LMTK3Q96Q04 1460 aa33.79■■■■□ 3
HLA-A-205ENST00000461903 RRP7BPQ9NSQ0 103 aa33.79■■■■□ 3
HLA-A-205ENST00000461903 DUOX2Q9NRD8 1548 aa33.79■■■■□ 3
HLA-A-205ENST00000461903 TRIM26Q12899 539 aaPredicted RBP33.78■■■■□ 3
HLA-A-205ENST00000461903 RIMS1Q86UR5 1692 aaKnown RBP33.74■■■□□ 2.99
HLA-A-205ENST00000461903 DHX29Q7Z478 1369 aaKnown RBP33.73■■■□□ 2.99
HLA-A-205ENST00000461903 GCC2Q8IWJ2 1684 aa33.7■■■□□ 2.99
HLA-A-205ENST00000461903 SIGLEC1Q9BZZ2 1709 aa33.69■■■□□ 2.98
HLA-A-205ENST00000461903 ERBINQ96RT1 1412 aa33.69■■■□□ 2.98
HLA-A-205ENST00000461903 AGLP35573 1532 aa33.69■■■□□ 2.98
HLA-A-205ENST00000461903 EIF2AK4Q9P2K8 1649 aaKnown RBP33.68■■■□□ 2.98
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms