RNA–Protein interactions for RNA: ENST00000461798.5

BRCA1-207, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-207ENST00000461798 FANCAO15360 1455 aa14.94□□□□□ -0.02
BRCA1-207ENST00000461798 POTEHQ6S545 545 aa14.93□□□□□ -0.02
BRCA1-207ENST00000461798 DENND4BO75064 1496 aaPredicted RBP14.93□□□□□ -0.02
BRCA1-207ENST00000461798 TROQ12816 1431 aaPredicted RBP14.91□□□□□ -0.02
BRCA1-207ENST00000461798 CASKIN1Q8WXD9 1431 aa14.91□□□□□ -0.02
BRCA1-207ENST00000461798 TTC37Q6PGP7 1564 aa14.9□□□□□ -0.02
BRCA1-207ENST00000461798 EFCAB2Q5VUJ9 269 aa14.9□□□□□ -0.02
BRCA1-207ENST00000461798 FRMPD1Q5SYB0 1578 aa14.9□□□□□ -0.02
BRCA1-207ENST00000461798 CFAP74Q9C0B2 1584 aa14.88□□□□□ -0.03
BRCA1-207ENST00000461798 CLIP1P30622 1438 aa14.86□□□□□ -0.03
BRCA1-207ENST00000461798 SCAPERQ9BY12 1400 aa14.86□□□□□ -0.03
BRCA1-207ENST00000461798 MAGI2Q86UL8 1455 aa14.86□□□□□ -0.03
BRCA1-207ENST00000461798 CCDC18Q5T9S5 1454 aa14.85□□□□□ -0.03
BRCA1-207ENST00000461798 RICTORQ6R327 1708 aa14.84□□□□□ -0.03
BRCA1-207ENST00000461798 ZMYM4Q5VZL5 1548 aa14.84□□□□□ -0.03
BRCA1-207ENST00000461798 POGZQ7Z3K3 1410 aa14.83□□□□□ -0.04
BRCA1-207ENST00000461798 ARID4BQ4LE39 1312 aaPredicted RBP14.82□□□□□ -0.04
BRCA1-207ENST00000461798 FYCO1Q9BQS8 1478 aa14.82□□□□□ -0.04
BRCA1-207ENST00000461798 KIF14Q15058 1648 aa14.81□□□□□ -0.04
BRCA1-207ENST00000461798 ARHGEF40Q8TER5 1519 aa14.81□□□□□ -0.04
BRCA1-207ENST00000461798 PCF11O94913 1555 aaKnown RBP14.81□□□□□ -0.04
BRCA1-207ENST00000461798 ADAMTSL3P82987 1691 aa14.81□□□□□ -0.04
BRCA1-207ENST00000461798 YEATS2Q9ULM3 1422 aa14.8□□□□□ -0.04
BRCA1-207ENST00000461798 LRRIQ1Q96JM4 1722 aa14.8□□□□□ -0.04
BRCA1-207ENST00000461798 PTPRMP28827 1452 aa14.79□□□□□ -0.04
BRCA1-207ENST00000461798 ZFYVE16Q7Z3T8 1539 aa14.78□□□□□ -0.04
BRCA1-207ENST00000461798 MYO5CQ9NQX4 1742 aa14.78□□□□□ -0.04
BRCA1-207ENST00000461798 AFAP1Q8N556 730 aa14.77□□□□□ -0.05
BRCA1-207ENST00000461798 ARHGAP5Q13017 1502 aa14.76□□□□□ -0.05
BRCA1-207ENST00000461798 BCORL1Q5H9F3 1711 aa14.76□□□□□ -0.05
BRCA1-207ENST00000461798 ATP10AO60312 1499 aa14.76□□□□□ -0.05
BRCA1-207ENST00000461798 ZNF518AQ6AHZ1 1483 aa14.76□□□□□ -0.05
BRCA1-207ENST00000461798 HECW2Q9P2P5 1572 aa14.75□□□□□ -0.05
BRCA1-207ENST00000461798 KDM5CP41229 1560 aa14.72□□□□□ -0.05
BRCA1-207ENST00000461798 MLH3Q9UHC1 1453 aa14.71□□□□□ -0.05
BRCA1-207ENST00000461798 CEP162Q5TB80 1403 aa14.71□□□□□ -0.05
BRCA1-207ENST00000461798 C9orf84Q5VXU9 1444 aa14.71□□□□□ -0.05
BRCA1-207ENST00000461798 CDC42BPBQ9Y5S2 1711 aa14.71□□□□□ -0.05
BRCA1-207ENST00000461798 ARHGEF12Q9NZN5 1544 aa14.71□□□□□ -0.06
BRCA1-207ENST00000461798 GPATCH8Q9UKJ3 1502 aaKnown RBP14.71□□□□□ -0.06
BRCA1-207ENST00000461798 MADDQ8WXG6 1647 aa14.7□□□□□ -0.06
BRCA1-207ENST00000461798 TRAPPC8Q9Y2L5 1435 aa14.7□□□□□ -0.06
BRCA1-207ENST00000461798 PREX2Q70Z35 1606 aa14.7□□□□□ -0.06
BRCA1-207ENST00000461798 ABCC1P33527 1531 aa14.68□□□□□ -0.06
BRCA1-207ENST00000461798 MLECQ14165 292 aa14.68□□□□□ -0.06
BRCA1-207ENST00000461798 SIGLEC1Q9BZZ2 1709 aa14.68□□□□□ -0.06
BRCA1-207ENST00000461798 MTUS2Q5JR59 1369 aa14.68□□□□□ -0.06
BRCA1-207ENST00000461798 CFDP1Q9UEE9 299 aaPredicted RBP14.67□□□□□ -0.06
BRCA1-207ENST00000461798 KIAA1107Q9UPP5 1409 aa14.66□□□□□ -0.06
BRCA1-207ENST00000461798 LOC105371045A0A1W2PR82 267 aa14.66□□□□□ -0.06
BRCA1-207ENST00000461798 MYT1LQ9UL68 1186 aa14.66□□□□□ -0.06
BRCA1-207ENST00000461798 REREQ9P2R6 1566 aa14.65□□□□□ -0.06
BRCA1-207ENST00000461798 CCNB3Q8WWL7 1395 aa14.65□□□□□ -0.06
BRCA1-207ENST00000461798 ZNF777Q9ULD5 760 aaPredicted RBP14.65□□□□□ -0.06
BRCA1-207ENST00000461798 CDC42BPAQ5VT25 1732 aa14.65□□□□□ -0.06
BRCA1-207ENST00000461798 HNRNPMP52272 730 aaKnown RBP eCLIP14.64□□□□□ -0.07
BRCA1-207ENST00000461798 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.64□□□□□ -0.071e-6■■■■□ 21.6
BRCA1-207ENST00000461798 RIMS1Q86UR5 1692 aaKnown RBP14.63□□□□□ -0.07
BRCA1-207ENST00000461798 DIP2CQ9Y2E4 1556 aa14.63□□□□□ -0.07
BRCA1-207ENST00000461798 PLEKHH2Q8IVE3 1493 aa14.63□□□□□ -0.07
BRCA1-207ENST00000461798 AGLP35573 1532 aa14.62□□□□□ -0.07
BRCA1-207ENST00000461798 LMTK3Q96Q04 1460 aa14.62□□□□□ -0.07
BRCA1-207ENST00000461798 SPAG9O60271 1321 aaKnown RBP14.62□□□□□ -0.07
BRCA1-207ENST00000461798 ITSN2Q9NZM3 1697 aa14.61□□□□□ -0.07
BRCA1-207ENST00000461798 SAMD9LQ8IVG5 1584 aa14.61□□□□□ -0.07
BRCA1-207ENST00000461798 EHBP1L1Q8N3D4 1523 aa14.6□□□□□ -0.07
BRCA1-207ENST00000461798 ABCA6Q8N139 1617 aa14.59□□□□□ -0.07
BRCA1-207ENST00000461798 KIDINS220Q9ULH0 1771 aa14.58□□□□□ -0.08
BRCA1-207ENST00000461798 SYCP2Q9BX26 1530 aa14.58□□□□□ -0.08
BRCA1-207ENST00000461798 VPS8Q8N3P4 1428 aa14.58□□□□□ -0.08
BRCA1-207ENST00000461798 CEBPAP49715 358 aaPredicted RBP14.57□□□□□ -0.08
BRCA1-207ENST00000461798 ZNF644Q9H582 1327 aaPredicted RBP14.57□□□□□ -0.08
BRCA1-207ENST00000461798 FER1L4A9Z1Z3 1794 aa14.56□□□□□ -0.08
BRCA1-207ENST00000461798 ILDR1Q86SU0 546 aaPredicted RBP14.56□□□□□ -0.08
BRCA1-207ENST00000461798 MBD5Q9P267 1494 aa14.56□□□□□ -0.08
BRCA1-207ENST00000461798 TIAM1Q13009 1591 aa14.56□□□□□ -0.08
BRCA1-207ENST00000461798 HSPA2P54652 639 aa14.55□□□□□ -0.08
BRCA1-207ENST00000461798 RSPH4AQ5TD94 716 aa14.55□□□□□ -0.08
BRCA1-207ENST00000461798 ESF1Q9H501 851 aaKnown RBP14.54□□□□□ -0.08
BRCA1-207ENST00000461798 NCOA2Q15596 1464 aa14.54□□□□□ -0.08
BRCA1-207ENST00000461798 RTEL1-TNFRSF6BF6WH68 1400 aa14.53□□□□□ -0.08
BRCA1-207ENST00000461798 CNTLNQ9NXG0 1405 aa14.53□□□□□ -0.08
BRCA1-207ENST00000461798 ATP7AQ04656 1500 aa14.52□□□□□ -0.08
BRCA1-207ENST00000461798 MAP3K1Q13233 1512 aa14.52□□□□□ -0.08
BRCA1-207ENST00000461798 A2MP01023 1474 aa14.51□□□□□ -0.09
BRCA1-207ENST00000461798 LRRC9Q6ZRR7 1453 aa14.51□□□□□ -0.09
BRCA1-207ENST00000461798 INO80Q9ULG1 1556 aaPredicted RBP14.51□□□□□ -0.09
BRCA1-207ENST00000461798 SETD1BQ9UPS6 1966 aaKnown RBP14.49□□□□□ -0.09
BRCA1-207ENST00000461798 PLXNC1O60486 1568 aa14.48□□□□□ -0.09
BRCA1-207ENST00000461798 KANK4Q5T7N3 995 aaPredicted RBP14.48□□□□□ -0.09
BRCA1-207ENST00000461798 SUPT6HQ7KZ85 1726 aaKnown RBP14.48□□□□□ -0.09
BRCA1-207ENST00000461798 ZMYM3Q14202 1370 aa14.47□□□□□ -0.09
BRCA1-207ENST00000461798 DHX29Q7Z478 1369 aaKnown RBP14.47□□□□□ -0.09
BRCA1-207ENST00000461798 UHRF1BP1Q6BDS2 1440 aa14.47□□□□□ -0.09
BRCA1-207ENST00000461798 CAMSAP2Q08AD1 1489 aa14.45□□□□□ -0.1
BRCA1-207ENST00000461798 CCDC141Q6ZP82 1450 aa14.45□□□□□ -0.1
BRCA1-207ENST00000461798 NPATQ14207 1427 aa14.45□□□□□ -0.1
BRCA1-207ENST00000461798 GGT6Q6P531 493 aa14.45□□□□□ -0.1
BRCA1-207ENST00000461798 PREX1Q8TCU6 1659 aa14.45□□□□□ -0.1
BRCA1-207ENST00000461798 TSPY4P0CV99 314 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms