RNA–Protein interactions for RNA: ENST00000460601.5

NELFCD-201, Transcript of negative elongation factor complex member C/D, humanhuman

TSL 1 (best)

Gene NELFCD, Length 2,137 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFCD-201ENST00000460601 PREX2Q70Z35 1606 aa25.28■■□□□ 1.64
NELFCD-201ENST00000460601 CHIC2Q9UKJ5 165 aa25.26■■□□□ 1.63
NELFCD-201ENST00000460601 MYO5CQ9NQX4 1742 aa25.23■■□□□ 1.63
NELFCD-201ENST00000460601 ARHGAP5Q13017 1502 aa25.23■■□□□ 1.63
NELFCD-201ENST00000460601 DAPK1P53355 1430 aa25.22■■□□□ 1.63
NELFCD-201ENST00000460601 ABCC5O15440 1437 aa25.21■■□□□ 1.63
NELFCD-201ENST00000460601 SAMD9LQ8IVG5 1584 aa25.21■■□□□ 1.63
NELFCD-201ENST00000460601 DNMT1P26358 1616 aaKnown RBP25.21■■□□□ 1.63
NELFCD-201ENST00000460601 CCER1Q8TC90 406 aaPredicted RBP25.19■■□□□ 1.62
NELFCD-201ENST00000460601 RAB3GAP2Q9H2M9 1393 aa25.19■■□□□ 1.62
NELFCD-201ENST00000460601 PLCH2O75038 1416 aa25.18■■□□□ 1.62
NELFCD-201ENST00000460601 HRCP23327 699 aa25.17■■□□□ 1.62
NELFCD-201ENST00000460601 ABCA9Q8IUA7 1624 aa25.17■■□□□ 1.62
NELFCD-201ENST00000460601 HNRNPMP52272 730 aaKnown RBP eCLIP25.16■■□□□ 1.62
NELFCD-201ENST00000460601 SETD5Q9C0A6 1442 aa25.16■■□□□ 1.62
NELFCD-201ENST00000460601 RRP7BPQ9NSQ0 103 aa25.16■■□□□ 1.62
NELFCD-201ENST00000460601 MAPKBP1O60336 1514 aa25.14■■□□□ 1.61
NELFCD-201ENST00000460601 HFM1A2PYH4 1435 aa25.12■■□□□ 1.61
NELFCD-201ENST00000460601 SYCP2Q9BX26 1530 aa25.12■■□□□ 1.61
NELFCD-201ENST00000460601 NAIPQ13075 1403 aa25.11■■□□□ 1.61
NELFCD-201ENST00000460601 MBD5Q9P267 1494 aa25.11■■□□□ 1.61
NELFCD-201ENST00000460601 CROCC2H7BZ55 1655 aa25.09■■□□□ 1.61
NELFCD-201ENST00000460601 ARHGEF12Q9NZN5 1544 aa25.08■■□□□ 1.6
NELFCD-201ENST00000460601 EFCAB2Q5VUJ9 269 aa25.07■■□□□ 1.6
NELFCD-201ENST00000460601 AKNAQ7Z591 1439 aa25.07■■□□□ 1.6
NELFCD-201ENST00000460601 FANCAO15360 1455 aa25.06■■□□□ 1.6
NELFCD-201ENST00000460601 ARAP3Q8WWN8 1544 aa25.04■■□□□ 1.6
NELFCD-201ENST00000460601 DHX57Q6P158 1386 aaKnown RBP25.04■■□□□ 1.6
NELFCD-201ENST00000460601 KDM6BO15054 1643 aa25.04■■□□□ 1.6
NELFCD-201ENST00000460601 ARHGEF5Q12774 1597 aa25.03■■□□□ 1.6
NELFCD-201ENST00000460601 CD109Q6YHK3 1445 aa25.03■■□□□ 1.6
NELFCD-201ENST00000460601 ABCC1P33527 1531 aa25.02■■□□□ 1.6
NELFCD-201ENST00000460601 CCDC141Q6ZP82 1450 aa25.02■■□□□ 1.6
NELFCD-201ENST00000460601 C9orf84Q5VXU9 1444 aa25.02■■□□□ 1.6
NELFCD-201ENST00000460601 GCC2Q8IWJ2 1684 aa25.01■■□□□ 1.59
NELFCD-201ENST00000460601 ROCK1Q13464 1354 aa25.01■■□□□ 1.59
NELFCD-201ENST00000460601 NCOA1Q15788 1441 aa25■■□□□ 1.59
NELFCD-201ENST00000460601 KIAA1107Q9UPP5 1409 aa25■■□□□ 1.59
NELFCD-201ENST00000460601 TSPY4P0CV99 314 aa24.98■■□□□ 1.59
NELFCD-201ENST00000460601 TSPY10P0CW01 314 aa24.98■■□□□ 1.59
NELFCD-201ENST00000460601 PLEKHH2Q8IVE3 1493 aa24.98■■□□□ 1.59
NELFCD-201ENST00000460601 ADGBQ8N7X0 1667 aa24.98■■□□□ 1.59
NELFCD-201ENST00000460601 TRAPPC8Q9Y2L5 1435 aa24.98■■□□□ 1.59
NELFCD-201ENST00000460601 SHANK2Q9UPX8 1470 aa24.98■■□□□ 1.59
NELFCD-201ENST00000460601 ADGRL2O95490 1459 aa24.96■■□□□ 1.59
NELFCD-201ENST00000460601 DIP2BQ9P265 1576 aa24.96■■□□□ 1.59
NELFCD-201ENST00000460601 FAM69CQ0P6D2 419 aa24.95■■□□□ 1.59
NELFCD-201ENST00000460601 AFAP1Q8N556 730 aa24.94■■□□□ 1.58
NELFCD-201ENST00000460601 ADGRL1O94910 1474 aa24.94■■□□□ 1.58
NELFCD-201ENST00000460601 ANKRD30AQ9BXX3 1397 aa24.94■■□□□ 1.58
NELFCD-201ENST00000460601 MAP3K4Q9Y6R4 1608 aa24.93■■□□□ 1.58
NELFCD-201ENST00000460601 RSPH4AQ5TD94 716 aa24.92■■□□□ 1.58
NELFCD-201ENST00000460601 SCAPERQ9BY12 1400 aa24.91■■□□□ 1.58
NELFCD-201ENST00000460601 GLI2P10070 1586 aa24.9■■□□□ 1.58
NELFCD-201ENST00000460601 KIF15Q9NS87 1388 aa24.88■■□□□ 1.57
NELFCD-201ENST00000460601 DNAJC5Q9H3Z4 198 aa24.86■■□□□ 1.57
NELFCD-201ENST00000460601 MAST1Q9Y2H9 1570 aa24.85■■□□□ 1.57
NELFCD-201ENST00000460601 ANKRD50Q9ULJ7 1429 aa24.85■■□□□ 1.57
NELFCD-201ENST00000460601 ZEB1P37275 1124 aaPredicted RBP24.84■■□□□ 1.57
NELFCD-201ENST00000460601 TRIM52Q96A61 297 aa24.84■■□□□ 1.57
NELFCD-201ENST00000460601 TSPOAP1O95153 1857 aa24.84■■□□□ 1.57
NELFCD-201ENST00000460601 CFAP74Q9C0B2 1584 aa24.82■■□□□ 1.56
NELFCD-201ENST00000460601 KIF13AQ9H1H9 1805 aa24.82■■□□□ 1.56
NELFCD-201ENST00000460601 SPAG9O60271 1321 aaKnown RBP24.81■■□□□ 1.56
NELFCD-201ENST00000460601 ZFYVE16Q7Z3T8 1539 aa24.8■■□□□ 1.56
NELFCD-201ENST00000460601 PLXNC1O60486 1568 aa24.79■■□□□ 1.56
NELFCD-201ENST00000460601 NEO1Q92859 1461 aa24.79■■□□□ 1.56
NELFCD-201ENST00000460601 PPRC1Q5VV67 1664 aaKnown RBP24.78■■□□□ 1.56
NELFCD-201ENST00000460601 RAPGEF3O95398 923 aa24.77■■□□□ 1.56
NELFCD-201ENST00000460601 DENND4BO75064 1496 aaPredicted RBP24.77■■□□□ 1.56
NELFCD-201ENST00000460601 POGZQ7Z3K3 1410 aa24.76■■□□□ 1.55
NELFCD-201ENST00000460601 ZNF518AQ6AHZ1 1483 aa24.76■■□□□ 1.55
NELFCD-201ENST00000460601 INO80Q9ULG1 1556 aaPredicted RBP24.75■■□□□ 1.55
NELFCD-201ENST00000460601 MYT1LQ9UL68 1186 aa24.75■■□□□ 1.55
NELFCD-201ENST00000460601 ATP7AQ04656 1500 aa24.75■■□□□ 1.55
NELFCD-201ENST00000460601 CLSPNQ9HAW4 1339 aa24.73■■□□□ 1.55
NELFCD-201ENST00000460601 RTEL1-TNFRSF6BF6WH68 1400 aa24.73■■□□□ 1.55
NELFCD-201ENST00000460601 MPHOSPH9Q99550 1183 aa24.71■■□□□ 1.55
NELFCD-201ENST00000460601 KDM5CP41229 1560 aa24.7■■□□□ 1.55
NELFCD-201ENST00000460601 FOXD1Q16676 465 aa24.7■■□□□ 1.54
NELFCD-201ENST00000460601 SIN3AQ96ST3 1273 aa24.7■■□□□ 1.54
NELFCD-201ENST00000460601 KIDINS220Q9ULH0 1771 aa24.7■■□□□ 1.54
NELFCD-201ENST00000460601 DUOX2Q9NRD8 1548 aa24.69■■□□□ 1.54
NELFCD-201ENST00000460601 PZPP20742 1482 aa24.68■■□□□ 1.54
NELFCD-201ENST00000460601 SLC4A1APQ9BWU0 796 aaKnown RBP24.66■■□□□ 1.54
NELFCD-201ENST00000460601 RICTORQ6R327 1708 aa24.65■■□□□ 1.54
NELFCD-201ENST00000460601 NUP155O75694 1391 aa24.65■■□□□ 1.54
NELFCD-201ENST00000460601 TEX14Q8IWB6 1497 aa24.65■■□□□ 1.54
NELFCD-201ENST00000460601 NEUROD1Q13562 356 aa24.64■■□□□ 1.53
NELFCD-201ENST00000460601 ERBINQ96RT1 1412 aa24.64■■□□□ 1.53
NELFCD-201ENST00000460601 FRMPD1Q5SYB0 1578 aa24.64■■□□□ 1.53
NELFCD-201ENST00000460601 HECW2Q9P2P5 1572 aa24.64■■□□□ 1.53
NELFCD-201ENST00000460601 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.62■■□□□ 1.536e-8■■□□□ 12.1
NELFCD-201ENST00000460601 MLH3Q9UHC1 1453 aa24.61■■□□□ 1.53
NELFCD-201ENST00000460601 TRHP20396 242 aaPredicted RBP24.59■■□□□ 1.53
NELFCD-201ENST00000460601 COL17A1Q9UMD9 1497 aaPredicted RBP24.58■■□□□ 1.53
NELFCD-201ENST00000460601 ABCA6Q8N139 1617 aa24.58■■□□□ 1.53
NELFCD-201ENST00000460601 UNC13BO14795 1591 aa24.57■■□□□ 1.52
NELFCD-201ENST00000460601 KDM5DQ9BY66 1539 aa24.57■■□□□ 1.52
NELFCD-201ENST00000460601 YEATS2Q9ULM3 1422 aa24.56■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms