RNA–Protein interactions for RNA: ENST00000460569.1

UPF2-204, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF2, Length 640 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-204ENST00000460569 PLCH2O75038 1416 aa15.74■□□□□ 0.11
UPF2-204ENST00000460569 MYOM3Q5VTT5 1437 aa15.74■□□□□ 0.11
UPF2-204ENST00000460569 PHLDB1Q86UU1 1377 aa15.74■□□□□ 0.11
UPF2-204ENST00000460569 TEX14Q8IWB6 1497 aa15.72■□□□□ 0.11
UPF2-204ENST00000460569 FANCAO15360 1455 aa15.71■□□□□ 0.11
UPF2-204ENST00000460569 SAMD9LQ8IVG5 1584 aa15.7■□□□□ 0.1
UPF2-204ENST00000460569 CFDP1Q9UEE9 299 aaPredicted RBP15.69■□□□□ 0.1
UPF2-204ENST00000460569 FGD6Q6ZV73 1430 aa15.68■□□□□ 0.1
UPF2-204ENST00000460569 PTPN23Q9H3S7 1636 aa15.68■□□□□ 0.1
UPF2-204ENST00000460569 NEO1Q92859 1461 aa15.68■□□□□ 0.1
UPF2-204ENST00000460569 MIA2Q96PC5 1412 aa15.68■□□□□ 0.1
UPF2-204ENST00000460569 EFCAB2Q5VUJ9 269 aa15.67■□□□□ 0.1
UPF2-204ENST00000460569 CAMSAP2Q08AD1 1489 aa15.66■□□□□ 0.1
UPF2-204ENST00000460569 ABCC1P33527 1531 aa15.66■□□□□ 0.1
UPF2-204ENST00000460569 ZNF777Q9ULD5 760 aaPredicted RBP15.65■□□□□ 0.1
UPF2-204ENST00000460569 AKNAQ7Z591 1439 aa15.65■□□□□ 0.1
UPF2-204ENST00000460569 ADGRL1O94910 1474 aa15.65■□□□□ 0.1
UPF2-204ENST00000460569 SYCP2Q9BX26 1530 aa15.64■□□□□ 0.09
UPF2-204ENST00000460569 PLEKHH2Q8IVE3 1493 aa15.63■□□□□ 0.09
UPF2-204ENST00000460569 TCOF1Q13428 1488 aaKnown RBP15.62■□□□□ 0.09
UPF2-204ENST00000460569 ZNF644Q9H582 1327 aaPredicted RBP15.61■□□□□ 0.09
UPF2-204ENST00000460569 KDM6BO15054 1643 aa15.61■□□□□ 0.09
UPF2-204ENST00000460569 RRBP1Q9P2E9 1410 aaKnown RBP15.6■□□□□ 0.09
UPF2-204ENST00000460569 RICTORQ6R327 1708 aa15.6■□□□□ 0.09
UPF2-204ENST00000460569 SCAPERQ9BY12 1400 aa15.6■□□□□ 0.09
UPF2-204ENST00000460569 ARHGEF12Q9NZN5 1544 aa15.59■□□□□ 0.09
UPF2-204ENST00000460569 CROCC2H7BZ55 1655 aa15.58■□□□□ 0.08
UPF2-204ENST00000460569 FAM50AQ14320 339 aaKnown RBP15.58■□□□□ 0.08
UPF2-204ENST00000460569 KIAA1107Q9UPP5 1409 aa15.58■□□□□ 0.08
UPF2-204ENST00000460569 DENND4BO75064 1496 aaPredicted RBP15.58■□□□□ 0.08
UPF2-204ENST00000460569 ARHGEF5Q12774 1597 aa15.58■□□□□ 0.08
UPF2-204ENST00000460569 FRMPD1Q5SYB0 1578 aa15.58■□□□□ 0.08
UPF2-204ENST00000460569 DNMT1P26358 1616 aaKnown RBP15.57■□□□□ 0.08
UPF2-204ENST00000460569 POGZQ7Z3K3 1410 aa15.57■□□□□ 0.08
UPF2-204ENST00000460569 CCDC141Q6ZP82 1450 aa15.56■□□□□ 0.08
UPF2-204ENST00000460569 ZNF518AQ6AHZ1 1483 aa15.55■□□□□ 0.08
UPF2-204ENST00000460569 MBD5Q9P267 1494 aa15.55■□□□□ 0.08
UPF2-204ENST00000460569 HNRNPMP52272 730 aaKnown RBP eCLIP15.55■□□□□ 0.08
UPF2-204ENST00000460569 COL17A1Q9UMD9 1497 aaPredicted RBP15.54■□□□□ 0.08
UPF2-204ENST00000460569 TRAPPC8Q9Y2L5 1435 aa15.54■□□□□ 0.08
UPF2-204ENST00000460569 KDM5CP41229 1560 aa15.53■□□□□ 0.08
UPF2-204ENST00000460569 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.53■□□□□ 0.08
UPF2-204ENST00000460569 DAPK1P53355 1430 aa15.52■□□□□ 0.08
UPF2-204ENST00000460569 HECW2Q9P2P5 1572 aa15.52■□□□□ 0.07
UPF2-204ENST00000460569 ZMYM4Q5VZL5 1548 aa15.52■□□□□ 0.07
UPF2-204ENST00000460569 INO80Q9ULG1 1556 aaPredicted RBP15.51■□□□□ 0.07
UPF2-204ENST00000460569 RAPGEF3O95398 923 aa15.51■□□□□ 0.07
UPF2-204ENST00000460569 ADGBQ8N7X0 1667 aa15.51■□□□□ 0.07
UPF2-204ENST00000460569 ABCC5O15440 1437 aa15.5■□□□□ 0.07
UPF2-204ENST00000460569 MAST1Q9Y2H9 1570 aa15.49■□□□□ 0.07
UPF2-204ENST00000460569 ZFYVE16Q7Z3T8 1539 aa15.49■□□□□ 0.07
UPF2-204ENST00000460569 SHANK2Q9UPX8 1470 aa15.49■□□□□ 0.07
UPF2-204ENST00000460569 AFAP1Q8N556 730 aa15.49■□□□□ 0.07
UPF2-204ENST00000460569 ATP7AQ04656 1500 aa15.48■□□□□ 0.07
UPF2-204ENST00000460569 KIDINS220Q9ULH0 1771 aa15.48■□□□□ 0.07
UPF2-204ENST00000460569 ITGAEP38570 1179 aa15.47■□□□□ 0.07
UPF2-204ENST00000460569 RSPH4AQ5TD94 716 aa15.47■□□□□ 0.07
UPF2-204ENST00000460569 C9orf84Q5VXU9 1444 aa15.47■□□□□ 0.07
UPF2-204ENST00000460569 ARHGEF40Q8TER5 1519 aa15.46■□□□□ 0.07
UPF2-204ENST00000460569 ABCA6Q8N139 1617 aa15.46■□□□□ 0.06
UPF2-204ENST00000460569 SPAG9O60271 1321 aaKnown RBP15.45■□□□□ 0.06
UPF2-204ENST00000460569 TSPY4P0CV99 314 aa15.45■□□□□ 0.06
UPF2-204ENST00000460569 TSPY10P0CW01 314 aa15.45■□□□□ 0.06
UPF2-204ENST00000460569 MYT1LQ9UL68 1186 aa15.45■□□□□ 0.06
UPF2-204ENST00000460569 MLH3Q9UHC1 1453 aa15.45■□□□□ 0.06
UPF2-204ENST00000460569 PLXNC1O60486 1568 aa15.45■□□□□ 0.06
UPF2-204ENST00000460569 MAGI2Q86UL8 1455 aa15.44■□□□□ 0.06
UPF2-204ENST00000460569 DIP2CQ9Y2E4 1556 aa15.44■□□□□ 0.06
UPF2-204ENST00000460569 PTPRKQ15262 1439 aa15.43■□□□□ 0.06
UPF2-204ENST00000460569 RTEL1-TNFRSF6BF6WH68 1400 aa15.43■□□□□ 0.06
UPF2-204ENST00000460569 ADGRL2O95490 1459 aa15.42■□□□□ 0.06
UPF2-204ENST00000460569 CHIC2Q9UKJ5 165 aa15.42■□□□□ 0.06
UPF2-204ENST00000460569 YEATS2Q9ULM3 1422 aa15.42■□□□□ 0.06
UPF2-204ENST00000460569 TRIM26Q12899 539 aaPredicted RBP15.4■□□□□ 0.06
UPF2-204ENST00000460569 ANKRD30AQ9BXX3 1397 aa15.39■□□□□ 0.05
UPF2-204ENST00000460569 GCC2Q8IWJ2 1684 aa15.39■□□□□ 0.05
UPF2-204ENST00000460569 ROCK1Q13464 1354 aa15.37■□□□□ 0.05
UPF2-204ENST00000460569 NCOA1Q15788 1441 aa15.37■□□□□ 0.05
UPF2-204ENST00000460569 KIF15Q9NS87 1388 aa15.36■□□□□ 0.05
UPF2-204ENST00000460569 ATP10AO60312 1499 aa15.36■□□□□ 0.05
UPF2-204ENST00000460569 DUOX2Q9NRD8 1548 aa15.36■□□□□ 0.05
UPF2-204ENST00000460569 REREQ9P2R6 1566 aa15.36■□□□□ 0.05
UPF2-204ENST00000460569 A2MP01023 1474 aa15.35■□□□□ 0.05
UPF2-204ENST00000460569 RRP7BPQ9NSQ0 103 aa15.34■□□□□ 0.05
UPF2-204ENST00000460569 SIGLEC1Q9BZZ2 1709 aa15.34■□□□□ 0.05
UPF2-204ENST00000460569 EIF2AK4Q9P2K8 1649 aaKnown RBP15.33■□□□□ 0.04
UPF2-204ENST00000460569 HFM1A2PYH4 1435 aa15.32■□□□□ 0.04
UPF2-204ENST00000460569 ERBINQ96RT1 1412 aa15.31■□□□□ 0.04
UPF2-204ENST00000460569 NAIPQ13075 1403 aa15.3■□□□□ 0.04
UPF2-204ENST00000460569 DHX29Q7Z478 1369 aaKnown RBP15.3■□□□□ 0.04
UPF2-204ENST00000460569 BCORL1Q5H9F3 1711 aa15.29■□□□□ 0.04
UPF2-204ENST00000460569 ANKRD50Q9ULJ7 1429 aa15.29■□□□□ 0.04
UPF2-204ENST00000460569 AGLP35573 1532 aa15.28■□□□□ 0.04
UPF2-204ENST00000460569 RNF17Q9BXT8 1623 aaKnown RBP15.27■□□□□ 0.03
UPF2-204ENST00000460569 PCGF6Q9BYE7 350 aa15.26■□□□□ 0.03
UPF2-204ENST00000460569 SETD5Q9C0A6 1442 aa15.26■□□□□ 0.03
UPF2-204ENST00000460569 DEPDC5O75140 1603 aa15.25■□□□□ 0.03
UPF2-204ENST00000460569 UNC13BO14795 1591 aa15.24■□□□□ 0.03
UPF2-204ENST00000460569 ARID4BQ4LE39 1312 aaPredicted RBP15.24■□□□□ 0.03
UPF2-204ENST00000460569 KIF3BO15066 747 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms