RNA–Protein interactions for RNA: ENST00000460214.5

LRP8-206, Transcript of LDL receptor related protein 8, humanhuman

TSL 3

Gene LRP8, Length 775 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP8-206ENST00000460214 CFAP43Q8NDM7 1665 aa12.96□□□□□ -0.34
LRP8-206ENST00000460214 ATP10BO94823 1461 aa12.95□□□□□ -0.34
LRP8-206ENST00000460214 ARHGAP35Q9NRY4 1499 aa12.95□□□□□ -0.34
LRP8-206ENST00000460214 TSPOAP1O95153 1857 aa12.95□□□□□ -0.34
LRP8-206ENST00000460214 FMN1Q68DA7 1419 aa12.92□□□□□ -0.34
LRP8-206ENST00000460214 RBM42Q9BTD8 480 aaKnown RBP12.92□□□□□ -0.34
LRP8-206ENST00000460214 UBTFP17480 764 aaKnown RBP12.91□□□□□ -0.34
LRP8-206ENST00000460214 P3H3Q8IVL6 736 aa12.91□□□□□ -0.34
LRP8-206ENST00000460214 KDM6BO15054 1643 aa12.9□□□□□ -0.34
LRP8-206ENST00000460214 HECW1Q76N89 1606 aa12.9□□□□□ -0.34
LRP8-206ENST00000460214 ABCA9Q8IUA7 1624 aa12.9□□□□□ -0.34
LRP8-206ENST00000460214 TEX14Q8IWB6 1497 aa12.89□□□□□ -0.35
LRP8-206ENST00000460214 MAGI3Q5TCQ9 1506 aa12.88□□□□□ -0.35
LRP8-206ENST00000460214 LRRIQ1Q96JM4 1722 aa12.85□□□□□ -0.35
LRP8-206ENST00000460214 CD109Q6YHK3 1445 aa12.83□□□□□ -0.36
LRP8-206ENST00000460214 RANGAP1P46060 587 aaPredicted RBP12.83□□□□□ -0.36
LRP8-206ENST00000460214 CDK13Q14004 1512 aaKnown RBP12.83□□□□□ -0.36
LRP8-206ENST00000460214 PCF11O94913 1555 aaKnown RBP12.82□□□□□ -0.36
LRP8-206ENST00000460214 CLIP1P30622 1438 aa12.81□□□□□ -0.36
LRP8-206ENST00000460214 CASKIN1Q8WXD9 1431 aa12.8□□□□□ -0.36
LRP8-206ENST00000460214 FYCO1Q9BQS8 1478 aa12.8□□□□□ -0.36
LRP8-206ENST00000460214 AKT1S1Q96B36 256 aa12.8□□□□□ -0.36
LRP8-206ENST00000460214 CCDC18Q5T9S5 1454 aa12.79□□□□□ -0.36
LRP8-206ENST00000460214 COL17A1Q9UMD9 1497 aaPredicted RBP12.78□□□□□ -0.36
LRP8-206ENST00000460214 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.78□□□□□ -0.36
LRP8-206ENST00000460214 ARAP3Q8WWN8 1544 aa12.78□□□□□ -0.36
LRP8-206ENST00000460214 TTC37Q6PGP7 1564 aa12.78□□□□□ -0.36
LRP8-206ENST00000460214 NEO1Q92859 1461 aa12.78□□□□□ -0.36
LRP8-206ENST00000460214 CFAP74Q9C0B2 1584 aa12.77□□□□□ -0.36
LRP8-206ENST00000460214 ARID3CA6NKF2 412 aa12.77□□□□□ -0.37
LRP8-206ENST00000460214 PHLDB1Q86UU1 1377 aa12.77□□□□□ -0.37
LRP8-206ENST00000460214 KCNH8Q96L42 1107 aa12.76□□□□□ -0.37
LRP8-206ENST00000460214 KIF14Q15058 1648 aa12.76□□□□□ -0.37
LRP8-206ENST00000460214 PLEKHD1A6NEE1 506 aa12.75□□□□□ -0.37
LRP8-206ENST00000460214 CEP162Q5TB80 1403 aa12.75□□□□□ -0.37
LRP8-206ENST00000460214 MYO5CQ9NQX4 1742 aa12.74□□□□□ -0.37
LRP8-206ENST00000460214 TROQ12816 1431 aaPredicted RBP12.74□□□□□ -0.37
LRP8-206ENST00000460214 FBXO3Q9UK99 471 aa12.74□□□□□ -0.37
LRP8-206ENST00000460214 CDK11AQ9UQ88 783 aaPredicted RBP12.71□□□□□ -0.37
LRP8-206ENST00000460214 FRMPD1Q5SYB0 1578 aa12.71□□□□□ -0.37
LRP8-206ENST00000460214 RICTORQ6R327 1708 aa12.71□□□□□ -0.38
LRP8-206ENST00000460214 FANCAO15360 1455 aa12.69□□□□□ -0.38
LRP8-206ENST00000460214 PLCH2O75038 1416 aa12.69□□□□□ -0.38
LRP8-206ENST00000460214 PREX2Q70Z35 1606 aa12.68□□□□□ -0.38
LRP8-206ENST00000460214 CDC42BPBQ9Y5S2 1711 aa12.67□□□□□ -0.38
LRP8-206ENST00000460214 ZMYM4Q5VZL5 1548 aa12.67□□□□□ -0.38
LRP8-206ENST00000460214 CDC42BPAQ5VT25 1732 aa12.66□□□□□ -0.38
LRP8-206ENST00000460214 REM2Q8IYK8 340 aaPredicted RBP12.66□□□□□ -0.38
LRP8-206ENST00000460214 AKNAQ7Z591 1439 aa12.65□□□□□ -0.38
LRP8-206ENST00000460214 VPS8Q8N3P4 1428 aa12.63□□□□□ -0.39
LRP8-206ENST00000460214 EHBP1L1Q8N3D4 1523 aa12.63□□□□□ -0.39
LRP8-206ENST00000460214 ARHGEF40Q8TER5 1519 aa12.63□□□□□ -0.39
LRP8-206ENST00000460214 STAG3Q9UJ98 1225 aa12.63□□□□□ -0.39
LRP8-206ENST00000460214 ATP1B4Q9UN42 357 aaPredicted RBP12.63□□□□□ -0.39
LRP8-206ENST00000460214 DENND4BO75064 1496 aaPredicted RBP12.63□□□□□ -0.39
LRP8-206ENST00000460214 ADGRL1O94910 1474 aa12.61□□□□□ -0.39
LRP8-206ENST00000460214 POGZQ7Z3K3 1410 aa12.61□□□□□ -0.39
LRP8-206ENST00000460214 KDM5CP41229 1560 aa12.6□□□□□ -0.39
LRP8-206ENST00000460214 TIAM1Q13009 1591 aa12.6□□□□□ -0.39
LRP8-206ENST00000460214 MAGI2Q86UL8 1455 aa12.6□□□□□ -0.39
LRP8-206ENST00000460214 SPDYE1Q8NFV5 336 aaPredicted RBP12.6□□□□□ -0.39
LRP8-206ENST00000460214 ABCC1P33527 1531 aa12.6□□□□□ -0.39
LRP8-206ENST00000460214 ARHGAP5Q13017 1502 aa12.6□□□□□ -0.39
LRP8-206ENST00000460214 MAP3K1Q13233 1512 aa12.6□□□□□ -0.39
LRP8-206ENST00000460214 LOC105371045A0A1W2PR82 267 aa12.59□□□□□ -0.39
LRP8-206ENST00000460214 ITSN2Q9NZM3 1697 aa12.58□□□□□ -0.4
LRP8-206ENST00000460214 RAPGEF3O95398 923 aa12.57□□□□□ -0.4
LRP8-206ENST00000460214 EFCAB2Q5VUJ9 269 aa12.57□□□□□ -0.4
LRP8-206ENST00000460214 ZNF518AQ6AHZ1 1483 aa12.57□□□□□ -0.4
LRP8-206ENST00000460214 GPATCH8Q9UKJ3 1502 aaKnown RBP12.57□□□□□ -0.4
LRP8-206ENST00000460214 SUPT6HQ7KZ85 1726 aaKnown RBP12.57□□□□□ -0.4
LRP8-206ENST00000460214 SCAPERQ9BY12 1400 aa12.56□□□□□ -0.4
LRP8-206ENST00000460214 ZFYVE16Q7Z3T8 1539 aa12.56□□□□□ -0.4
LRP8-206ENST00000460214 SAMD9LQ8IVG5 1584 aa12.56□□□□□ -0.4
LRP8-206ENST00000460214 MTUS2Q5JR59 1369 aa12.56□□□□□ -0.4
LRP8-206ENST00000460214 KDM4FA0A1W2PPD8 638 aa12.55□□□□□ -0.4
LRP8-206ENST00000460214 VASPP50552 380 aaPredicted RBP12.55□□□□□ -0.4
LRP8-206ENST00000460214 HECW2Q9P2P5 1572 aa12.55□□□□□ -0.4
LRP8-206ENST00000460214 ADAMTSL3P82987 1691 aa12.54□□□□□ -0.4
LRP8-206ENST00000460214 BCORL1Q5H9F3 1711 aa12.54□□□□□ -0.4
LRP8-206ENST00000460214 REREQ9P2R6 1566 aa12.53□□□□□ -0.4
LRP8-206ENST00000460214 ARHGEF12Q9NZN5 1544 aa12.52□□□□□ -0.4
LRP8-206ENST00000460214 SIGLEC1Q9BZZ2 1709 aa12.52□□□□□ -0.41
LRP8-206ENST00000460214 LRRC9Q6ZRR7 1453 aa12.52□□□□□ -0.41
LRP8-206ENST00000460214 PLEKHH2Q8IVE3 1493 aa12.52□□□□□ -0.41
LRP8-206ENST00000460214 MLH3Q9UHC1 1453 aa12.52□□□□□ -0.41
LRP8-206ENST00000460214 PITPNM1O00562 1244 aa12.51□□□□□ -0.41
LRP8-206ENST00000460214 KIAA1107Q9UPP5 1409 aa12.51□□□□□ -0.41
LRP8-206ENST00000460214 YEATS2Q9ULM3 1422 aa12.5□□□□□ -0.41
LRP8-206ENST00000460214 NCOA2Q15596 1464 aa12.5□□□□□ -0.41
LRP8-206ENST00000460214 SYCP2Q9BX26 1530 aa12.5□□□□□ -0.41
LRP8-206ENST00000460214 DIP2CQ9Y2E4 1556 aa12.5□□□□□ -0.41
LRP8-206ENST00000460214 KIDINS220Q9ULH0 1771 aa12.5□□□□□ -0.41
LRP8-206ENST00000460214 ABCA6Q8N139 1617 aa12.49□□□□□ -0.41
LRP8-206ENST00000460214 CCNB3Q8WWL7 1395 aa12.49□□□□□ -0.41
LRP8-206ENST00000460214 INO80Q9ULG1 1556 aaPredicted RBP12.48□□□□□ -0.41
LRP8-206ENST00000460214 TRAPPC8Q9Y2L5 1435 aa12.48□□□□□ -0.41
LRP8-206ENST00000460214 ATP10AO60312 1499 aa12.47□□□□□ -0.41
LRP8-206ENST00000460214 C9orf84Q5VXU9 1444 aa12.47□□□□□ -0.41
LRP8-206ENST00000460214 CLEC11AQ9Y240 323 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms