RNA–Protein interactions for RNA: ENST00000458059.7

CNEP1R1-203, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNEP1R1, Length 2,965 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-203ENST00000458059 CNTLNQ9NXG0 1405 aa26.95■■□□□ 1.9
CNEP1R1-203ENST00000458059 CCDC7Q96M83 1385 aa26.94■■□□□ 1.9
CNEP1R1-203ENST00000458059 KIF21AQ7Z4S6 1674 aa26.92■■□□□ 1.9
CNEP1R1-203ENST00000458059 ARHGEF11O15085 1522 aa26.91■■□□□ 1.9
CNEP1R1-203ENST00000458059 KIF7Q2M1P5 1343 aa26.9■■□□□ 1.9
CNEP1R1-203ENST00000458059 HECW1Q76N89 1606 aa26.88■■□□□ 1.89
CNEP1R1-203ENST00000458059 TCOF1Q13428 1488 aaKnown RBP26.87■■□□□ 1.89
CNEP1R1-203ENST00000458059 IQGAP2Q13576 1575 aa26.85■■□□□ 1.89
CNEP1R1-203ENST00000458059 GCC2Q8IWJ2 1684 aa26.85■■□□□ 1.89
CNEP1R1-203ENST00000458059 ERICH6Q7L0X2 663 aa26.84■■□□□ 1.89
CNEP1R1-203ENST00000458059 ANKRD30BQ9BXX2 1392 aa26.83■■□□□ 1.89
CNEP1R1-203ENST00000458059 NCOA1Q15788 1441 aa26.82■■□□□ 1.88
CNEP1R1-203ENST00000458059 FBLN2P98095 1184 aa26.82■■□□□ 1.88
CNEP1R1-203ENST00000458059 DAPK1P53355 1430 aa26.82■■□□□ 1.88
CNEP1R1-203ENST00000458059 PPP4R2Q9NY27 417 aa26.81■■□□□ 1.88
CNEP1R1-203ENST00000458059 TARBP1Q13395 1621 aaKnown RBP26.8■■□□□ 1.88
CNEP1R1-203ENST00000458059 ABCC5O15440 1437 aa26.79■■□□□ 1.88
CNEP1R1-203ENST00000458059 MIA2Q96PC5 1412 aa26.78■■□□□ 1.88
CNEP1R1-203ENST00000458059 CFDP1Q9UEE9 299 aaPredicted RBP26.77■■□□□ 1.88
CNEP1R1-203ENST00000458059 WDR62O43379 1518 aa26.76■■□□□ 1.87
CNEP1R1-203ENST00000458059 ZNF608Q9ULD9 1512 aaPredicted RBP26.75■■□□□ 1.87
CNEP1R1-203ENST00000458059 RPRD2Q5VT52 1461 aaKnown RBP26.74■■□□□ 1.87
CNEP1R1-203ENST00000458059 KDM2AQ9Y2K7 1162 aa26.73■■□□□ 1.87
CNEP1R1-203ENST00000458059 PBRM1Q86U86 1689 aa26.73■■□□□ 1.87
CNEP1R1-203ENST00000458059 PKD2Q13563 968 aa26.73■■□□□ 1.87
CNEP1R1-203ENST00000458059 ZBED9Q6R2W3 1325 aa26.72■■□□□ 1.87
CNEP1R1-203ENST00000458059 PRG4Q92954 1404 aaPredicted RBP26.72■■□□□ 1.87
CNEP1R1-203ENST00000458059 AKNAQ7Z591 1439 aa26.71■■□□□ 1.87
CNEP1R1-203ENST00000458059 BCL11AQ9H165 835 aa26.71■■□□□ 1.87
CNEP1R1-203ENST00000458059 TEX14Q8IWB6 1497 aa26.71■■□□□ 1.87
CNEP1R1-203ENST00000458059 ADAMTS12P58397 1594 aa26.67■■□□□ 1.86
CNEP1R1-203ENST00000458059 SALL2Q9Y467 1007 aaPredicted RBP26.67■■□□□ 1.86
CNEP1R1-203ENST00000458059 NUP153P49790 1475 aaKnown RBP26.65■■□□□ 1.86
CNEP1R1-203ENST00000458059 USP47Q96K76 1375 aa26.64■■□□□ 1.85
CNEP1R1-203ENST00000458059 SPATA31E1Q6ZUB1 1445 aa26.63■■□□□ 1.85
CNEP1R1-203ENST00000458059 FANCIQ9NVI1 1328 aa26.62■■□□□ 1.85
CNEP1R1-203ENST00000458059 ROCK1Q13464 1354 aa26.61■■□□□ 1.85
CNEP1R1-203ENST00000458059 DISP1Q96F81 1524 aa26.59■■□□□ 1.85
CNEP1R1-203ENST00000458059 DNMT1P26358 1616 aaKnown RBP26.58■■□□□ 1.85
CNEP1R1-203ENST00000458059 PZPP20742 1482 aa26.58■■□□□ 1.85
CNEP1R1-203ENST00000458059 PLB1Q6P1J6 1458 aa26.58■■□□□ 1.85
CNEP1R1-203ENST00000458059 CHMP7Q8WUX9 453 aaPredicted RBP26.58■■□□□ 1.84
CNEP1R1-203ENST00000458059 TMC1Q8TDI8 760 aa26.57■■□□□ 1.84
CNEP1R1-203ENST00000458059 CARD11Q9BXL7 1154 aa26.57■■□□□ 1.84
CNEP1R1-203ENST00000458059 CAMSAP2Q08AD1 1489 aa26.55■■□□□ 1.84
CNEP1R1-203ENST00000458059 CCDC136Q96JN2 1154 aa26.54■■□□□ 1.84
CNEP1R1-203ENST00000458059 DHX29Q7Z478 1369 aaKnown RBP26.53■■□□□ 1.84
CNEP1R1-203ENST00000458059 ERICH6BQ5W0A0 696 aa26.53■■□□□ 1.84
CNEP1R1-203ENST00000458059 KIAA0556O60303 1618 aa26.53■■□□□ 1.84
CNEP1R1-203ENST00000458059 MRC2Q9UBG0 1479 aa26.51■■□□□ 1.83
CNEP1R1-203ENST00000458059 NUP155O75694 1391 aa26.51■■□□□ 1.83
CNEP1R1-203ENST00000458059 ST20-MTHFSA0A0A6YYL1 179 aa26.5■■□□□ 1.83
CNEP1R1-203ENST00000458059 DCAF11Q8TEB1 546 aa26.5■■□□□ 1.83
CNEP1R1-203ENST00000458059 KIAA0586Q9BVV6 1533 aa26.5■■□□□ 1.83
CNEP1R1-203ENST00000458059 NBR1Q14596 966 aa26.49■■□□□ 1.83
CNEP1R1-203ENST00000458059 NUDCQ9Y266 331 aa26.49■■□□□ 1.83
CNEP1R1-203ENST00000458059 BCORL1Q5H9F3 1711 aa26.49■■□□□ 1.83
CNEP1R1-203ENST00000458059 RAPGEF6Q8TEU7 1601 aa26.49■■□□□ 1.83
CNEP1R1-203ENST00000458059 KIAA1107Q9UPP5 1409 aa26.48■■□□□ 1.83
CNEP1R1-203ENST00000458059 TROQ12816 1431 aaPredicted RBP26.47■■□□□ 1.83
CNEP1R1-203ENST00000458059 KIF14Q15058 1648 aa26.46■■□□□ 1.83
CNEP1R1-203ENST00000458059 HNRNPMP52272 730 aaKnown RBP eCLIP26.46■■□□□ 1.83
CNEP1R1-203ENST00000458059 RGL3Q3MIN7 710 aa26.46■■□□□ 1.83
CNEP1R1-203ENST00000458059 GPATCH8Q9UKJ3 1502 aaKnown RBP26.45■■□□□ 1.83
CNEP1R1-203ENST00000458059 ANKRD50Q9ULJ7 1429 aa26.44■■□□□ 1.82
CNEP1R1-203ENST00000458059 ANKRD30AQ9BXX3 1397 aa26.43■■□□□ 1.82
CNEP1R1-203ENST00000458059 PAK3O75914 559 aaPredicted RBP26.43■■□□□ 1.82
CNEP1R1-203ENST00000458059 PNISRQ8TF01 805 aaKnown RBP26.43■■□□□ 1.82
CNEP1R1-203ENST00000458059 GRIN2AQ12879 1464 aa26.42■■□□□ 1.82
CNEP1R1-203ENST00000458059 PLEKHD1A6NEE1 506 aa26.4■■□□□ 1.82
CNEP1R1-203ENST00000458059 JPH4Q96JJ6 628 aa26.39■■□□□ 1.82
CNEP1R1-203ENST00000458059 SMG6Q86US8 1419 aaKnown RBP26.39■■□□□ 1.82
CNEP1R1-203ENST00000458059 TSPY4P0CV99 314 aa26.38■■□□□ 1.81
CNEP1R1-203ENST00000458059 TSPY10P0CW01 314 aa26.38■■□□□ 1.81
CNEP1R1-203ENST00000458059 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.38■■□□□ 1.81
CNEP1R1-203ENST00000458059 IFT140Q96RY7 1462 aa26.37■■□□□ 1.81
CNEP1R1-203ENST00000458059 MBD5Q9P267 1494 aa26.34■■□□□ 1.81
CNEP1R1-203ENST00000458059 NPM2Q86SE8 214 aaKnown RBP26.34■■□□□ 1.81
CNEP1R1-203ENST00000458059 NOP58Q9Y2X3 529 aaKnown RBP26.33■■□□□ 1.81
CNEP1R1-203ENST00000458059 POLR1AO95602 1720 aaPredicted RBP26.3■■□□□ 1.8
CNEP1R1-203ENST00000458059 ROCK2O75116 1388 aaKnown RBP26.29■■□□□ 1.8
CNEP1R1-203ENST00000458059 EIF4G3O43432 1585 aaKnown RBP26.29■■□□□ 1.8
CNEP1R1-203ENST00000458059 KDM5CP41229 1560 aa26.29■■□□□ 1.8
CNEP1R1-203ENST00000458059 C9orf84Q5VXU9 1444 aa26.29■■□□□ 1.8
CNEP1R1-203ENST00000458059 NBPF1Q3BBV0 1214 aa26.29■■□□□ 1.8
CNEP1R1-203ENST00000458059 CC2D1BQ5T0F9 858 aaKnown RBP26.29■■□□□ 1.8
CNEP1R1-203ENST00000458059 EXOC6Q8TAG9 804 aa26.28■■□□□ 1.8
CNEP1R1-203ENST00000458059 KIF15Q9NS87 1388 aa26.26■■□□□ 1.79
CNEP1R1-203ENST00000458059 CDCA7LQ96GN5 454 aa26.24■■□□□ 1.79
CNEP1R1-203ENST00000458059 ERCC6Q03468 1493 aa26.24■■□□□ 1.79
CNEP1R1-203ENST00000458059 CEP170Q5SW79 1584 aa26.24■■□□□ 1.79
CNEP1R1-203ENST00000458059 ADGBQ8N7X0 1667 aa26.24■■□□□ 1.79
CNEP1R1-203ENST00000458059 DEKP35659 375 aaKnown RBP26.23■■□□□ 1.79
CNEP1R1-203ENST00000458059 MYBBP1AQ9BQG0 1328 aaKnown RBP26.23■■□□□ 1.79
CNEP1R1-203ENST00000458059 ITSN2Q9NZM3 1697 aa26.23■■□□□ 1.79
CNEP1R1-203ENST00000458059 ANP32AP39687 249 aaKnown RBP26.22■■□□□ 1.79
CNEP1R1-203ENST00000458059 SKAP1Q86WV1 359 aa26.22■■□□□ 1.79
CNEP1R1-203ENST00000458059 PLIN1O60240 522 aa26.22■■□□□ 1.79
CNEP1R1-203ENST00000458059 CARMIL2Q6F5E8 1435 aa26.21■■□□□ 1.79
CNEP1R1-203ENST00000458059 ADGRL2O95490 1459 aa26.2■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms