RNA–Protein interactions for RNA: ENST00000457179.5

TOP3B-213, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 3,061 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-213ENST00000457179 EHBP1L1Q8N3D4 1523 aa18.93■□□□□ 0.62
TOP3B-213ENST00000457179 UGGT2Q9NYU1 1516 aa18.93■□□□□ 0.62
TOP3B-213ENST00000457179 HECW1Q76N89 1606 aa18.93■□□□□ 0.62
TOP3B-213ENST00000457179 NAIPQ13075 1403 aa18.92■□□□□ 0.62
TOP3B-213ENST00000457179 KIAA0556O60303 1618 aa18.92■□□□□ 0.62
TOP3B-213ENST00000457179 SUPT6HQ7KZ85 1726 aaKnown RBP18.92■□□□□ 0.62
TOP3B-213ENST00000457179 PPP1R15AO75807 674 aaPredicted RBP18.91■□□□□ 0.62
TOP3B-213ENST00000457179 MPHOSPH9Q99550 1183 aa18.9■□□□□ 0.62
TOP3B-213ENST00000457179 DEKP35659 375 aaKnown RBP18.89■□□□□ 0.61
TOP3B-213ENST00000457179 ANO8Q9HCE9 1232 aaPredicted RBP18.88■□□□□ 0.61
TOP3B-213ENST00000457179 PTPN23Q9H3S7 1636 aa18.87■□□□□ 0.61
TOP3B-213ENST00000457179 HFM1A2PYH4 1435 aa18.87■□□□□ 0.61
TOP3B-213ENST00000457179 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.86■□□□□ 0.614e-7■■■□□ 14.6
TOP3B-213ENST00000457179 MYT1LQ9UL68 1186 aa18.86■□□□□ 0.61
TOP3B-213ENST00000457179 TSPY4P0CV99 314 aa18.85■□□□□ 0.61
TOP3B-213ENST00000457179 TSPY10P0CW01 314 aa18.85■□□□□ 0.61
TOP3B-213ENST00000457179 POLR3GLQ9BT43 218 aa18.85■□□□□ 0.61
TOP3B-213ENST00000457179 NUP160Q12769 1436 aa18.85■□□□□ 0.61
TOP3B-213ENST00000457179 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.83■□□□□ 0.6
TOP3B-213ENST00000457179 IRX6P78412 446 aaPredicted RBP18.82■□□□□ 0.6
TOP3B-213ENST00000457179 TROQ12816 1431 aaPredicted RBP18.81■□□□□ 0.6
TOP3B-213ENST00000457179 UACAQ9BZF9 1416 aa18.81■□□□□ 0.6
TOP3B-213ENST00000457179 RAPGEF6Q8TEU7 1601 aa18.81■□□□□ 0.6
TOP3B-213ENST00000457179 FANCIQ9NVI1 1328 aa18.79■□□□□ 0.6
TOP3B-213ENST00000457179 L3MBTL2Q969R5 705 aa18.79■□□□□ 0.6
TOP3B-213ENST00000457179 ARHGEF11O15085 1522 aa18.78■□□□□ 0.6
TOP3B-213ENST00000457179 ABCC5O15440 1437 aa18.78■□□□□ 0.6
TOP3B-213ENST00000457179 ATP10BO94823 1461 aa18.77■□□□□ 0.6
TOP3B-213ENST00000457179 ANP32CO43423 234 aa18.77■□□□□ 0.59
TOP3B-213ENST00000457179 DAPK1P53355 1430 aa18.76■□□□□ 0.59
TOP3B-213ENST00000457179 NBR1Q14596 966 aa18.76■□□□□ 0.59
TOP3B-213ENST00000457179 PKD2Q13563 968 aa18.75■□□□□ 0.59
TOP3B-213ENST00000457179 KDM2AQ9Y2K7 1162 aa18.75■□□□□ 0.59
TOP3B-213ENST00000457179 MIA2Q96PC5 1412 aa18.75■□□□□ 0.59
TOP3B-213ENST00000457179 TIMELESSQ9UNS1 1208 aa18.75■□□□□ 0.59
TOP3B-213ENST00000457179 GPATCH8Q9UKJ3 1502 aaKnown RBP18.73■□□□□ 0.59
TOP3B-213ENST00000457179 KDM6BO15054 1643 aa18.73■□□□□ 0.59
TOP3B-213ENST00000457179 KIF14Q15058 1648 aa18.72■□□□□ 0.59
TOP3B-213ENST00000457179 ERCC6L2Q5T890 1561 aa18.71■□□□□ 0.59
TOP3B-213ENST00000457179 RGL3Q3MIN7 710 aa18.69■□□□□ 0.58
TOP3B-213ENST00000457179 CAMSAP2Q08AD1 1489 aa18.68■□□□□ 0.58
TOP3B-213ENST00000457179 SALL2Q9Y467 1007 aaPredicted RBP18.68■□□□□ 0.58
TOP3B-213ENST00000457179 CCDC136Q96JN2 1154 aa18.68■□□□□ 0.58
TOP3B-213ENST00000457179 NUP155O75694 1391 aa18.68■□□□□ 0.58
TOP3B-213ENST00000457179 HSPA5P11021 654 aaKnown RBP18.65■□□□□ 0.58
TOP3B-213ENST00000457179 TCOF1Q13428 1488 aaKnown RBP18.65■□□□□ 0.58
TOP3B-213ENST00000457179 ANKRD30AQ9BXX3 1397 aa18.64■□□□□ 0.58
TOP3B-213ENST00000457179 CHD1O14646 1710 aa18.63■□□□□ 0.57
TOP3B-213ENST00000457179 NCOA1Q15788 1441 aa18.62■□□□□ 0.57
TOP3B-213ENST00000457179 NBPF8Q3BBV2 869 aa18.62■□□□□ 0.57
TOP3B-213ENST00000457179 AFAP1Q8N556 730 aa18.61■□□□□ 0.57
TOP3B-213ENST00000457179 ANKRD50Q9ULJ7 1429 aa18.6■□□□□ 0.57
TOP3B-213ENST00000457179 RTN4Q9NQC3 1192 aaKnown RBP18.6■□□□□ 0.57
TOP3B-213ENST00000457179 EIF4G2P78344 907 aaKnown RBP eCLIP18.6■□□□□ 0.57
TOP3B-213ENST00000457179 AKNAQ7Z591 1439 aa18.58■□□□□ 0.57
TOP3B-213ENST00000457179 KIF15Q9NS87 1388 aa18.58■□□□□ 0.57
TOP3B-213ENST00000457179 SENP3-EIF4A1A0A087X0R7 540 aa18.58■□□□□ 0.56
TOP3B-213ENST00000457179 DENND4BO75064 1496 aaPredicted RBP18.57■□□□□ 0.56
TOP3B-213ENST00000457179 C9orf84Q5VXU9 1444 aa18.57■□□□□ 0.56
TOP3B-213ENST00000457179 DCAF11Q8TEB1 546 aa18.55■□□□□ 0.56
TOP3B-213ENST00000457179 HNRNPUQ00839 825 aaKnown RBP eCLIP18.55■□□□□ 0.56
TOP3B-213ENST00000457179 OSCARQ8IYS5 282 aa18.55■□□□□ 0.56
TOP3B-213ENST00000457179 WASHC2AQ641Q2 1341 aa18.55■□□□□ 0.56
TOP3B-213ENST00000457179 ABCA8O94911 1581 aa18.55■□□□□ 0.56
TOP3B-213ENST00000457179 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.54■□□□□ 0.56
TOP3B-213ENST00000457179 ROCK1Q13464 1354 aa18.54■□□□□ 0.56
TOP3B-213ENST00000457179 NPM1P06748 294 aaKnown RBP eCLIP18.53■□□□□ 0.56
TOP3B-213ENST00000457179 NOP58Q9Y2X3 529 aaKnown RBP18.53■□□□□ 0.56
TOP3B-213ENST00000457179 ANKRD30BQ9BXX2 1392 aa18.53■□□□□ 0.56
TOP3B-213ENST00000457179 C11orf95C9JLR9 678 aaPredicted RBP18.53■□□□□ 0.56
TOP3B-213ENST00000457179 CCER2I3L3R5 266 aa18.53■□□□□ 0.56
TOP3B-213ENST00000457179 PAK3O75914 559 aaPredicted RBP18.53■□□□□ 0.56
TOP3B-213ENST00000457179 EFCAB2Q5VUJ9 269 aa18.53■□□□□ 0.56
TOP3B-213ENST00000457179 SENP3Q9H4L4 574 aaPredicted RBP18.53■□□□□ 0.56
TOP3B-213ENST00000457179 ARHGAP5Q13017 1502 aa18.53■□□□□ 0.56
TOP3B-213ENST00000457179 IL27Q8NEV9 243 aa18.51■□□□□ 0.55
TOP3B-213ENST00000457179 DNMT1P26358 1616 aaKnown RBP18.49■□□□□ 0.55
TOP3B-213ENST00000457179 CCDC184Q52MB2 194 aa18.48■□□□□ 0.55
TOP3B-213ENST00000457179 B4GALNT3Q6L9W6 998 aa18.48■□□□□ 0.55
TOP3B-213ENST00000457179 ABCC10Q5T3U5 1492 aa18.48■□□□□ 0.55
TOP3B-213ENST00000457179 RTL5Q5HYW3 569 aaPredicted RBP18.47■□□□□ 0.55
TOP3B-213ENST00000457179 CYB5RLQ6IPT4 315 aa18.47■□□□□ 0.55
TOP3B-213ENST00000457179 KDM5BQ9UGL1 1544 aa18.47■□□□□ 0.55
TOP3B-213ENST00000457179 FAM9BQ8IZU0 186 aa18.46■□□□□ 0.55
TOP3B-213ENST00000457179 CARD11Q9BXL7 1154 aa18.44■□□□□ 0.54
TOP3B-213ENST00000457179 SPAG9O60271 1321 aaKnown RBP18.43■□□□□ 0.54
TOP3B-213ENST00000457179 SYCP2Q9BX26 1530 aa18.42■□□□□ 0.54
TOP3B-213ENST00000457179 PPP4R2Q9NY27 417 aa18.42■□□□□ 0.54
TOP3B-213ENST00000457179 PZPP20742 1482 aa18.42■□□□□ 0.54
TOP3B-213ENST00000457179 ERICH6BQ5W0A0 696 aa18.41■□□□□ 0.54
TOP3B-213ENST00000457179 KIF3BO15066 747 aa18.4■□□□□ 0.54
TOP3B-213ENST00000457179 GCC2Q8IWJ2 1684 aa18.39■□□□□ 0.54
TOP3B-213ENST00000457179 KIAA1107Q9UPP5 1409 aa18.39■□□□□ 0.54
TOP3B-213ENST00000457179 CDC42BPAQ5VT25 1732 aa18.39■□□□□ 0.53
TOP3B-213ENST00000457179 ITSN2Q9NZM3 1697 aa18.39■□□□□ 0.53
TOP3B-213ENST00000457179 RSPH4AQ5TD94 716 aa18.38■□□□□ 0.53
TOP3B-213ENST00000457179 ABCC2Q92887 1545 aa18.38■□□□□ 0.53
TOP3B-213ENST00000457179 MBD5Q9P267 1494 aa18.38■□□□□ 0.53
TOP3B-213ENST00000457179 CCDC141Q6ZP82 1450 aa18.38■□□□□ 0.53
TOP3B-213ENST00000457179 TTC37Q6PGP7 1564 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms