RNA–Protein interactions for RNA: ENST00000456976.5

DDX39B-213, Transcript of DExD-box helicase 39B, humanhuman

TSL 5

Gene DDX39B, Length 720 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-213ENST00000456976 ARHGEF12Q9NZN5 1544 aa20.65■□□□□ 0.9
DDX39B-213ENST00000456976 ZMYM4Q5VZL5 1548 aa20.64■□□□□ 0.9
DDX39B-213ENST00000456976 PHF23Q9BUL5 403 aaPredicted RBP20.63■□□□□ 0.89
DDX39B-213ENST00000456976 ATP10AO60312 1499 aa20.62■□□□□ 0.89
DDX39B-213ENST00000456976 SETD1BQ9UPS6 1966 aaKnown RBP20.61■□□□□ 0.89
DDX39B-213ENST00000456976 ESF1Q9H501 851 aaKnown RBP20.6■□□□□ 0.89
DDX39B-213ENST00000456976 SIGLEC1Q9BZZ2 1709 aa20.59■□□□□ 0.89
DDX39B-213ENST00000456976 C9orf84Q5VXU9 1444 aa20.58■□□□□ 0.88
DDX39B-213ENST00000456976 CFAP74Q9C0B2 1584 aa20.58■□□□□ 0.88
DDX39B-213ENST00000456976 CTTNBP2Q8WZ74 1663 aa20.58■□□□□ 0.88
DDX39B-213ENST00000456976 SCAF1Q9H7N4 1312 aaKnown RBP20.57■□□□□ 0.88
DDX39B-213ENST00000456976 HSPA1LP34931 641 aa20.57■□□□□ 0.88
DDX39B-213ENST00000456976 SCAPERQ9BY12 1400 aa20.55■□□□□ 0.88
DDX39B-213ENST00000456976 HECW1Q76N89 1606 aa20.55■□□□□ 0.88
DDX39B-213ENST00000456976 ZNF335Q9H4Z2 1342 aaPredicted RBP20.54■□□□□ 0.88
DDX39B-213ENST00000456976 NCOA1Q15788 1441 aa20.54■□□□□ 0.88
DDX39B-213ENST00000456976 MED1Q15648 1581 aaPredicted RBP20.53■□□□□ 0.88
DDX39B-213ENST00000456976 TRAPPC8Q9Y2L5 1435 aa20.53■□□□□ 0.88
DDX39B-213ENST00000456976 PIP4K2BP78356 416 aa20.52■□□□□ 0.88
DDX39B-213ENST00000456976 MYT1LQ9UL68 1186 aa20.51■□□□□ 0.87
DDX39B-213ENST00000456976 TOM1O60784 492 aa20.5■□□□□ 0.87
DDX39B-213ENST00000456976 NCKAP5LQ9HCH0 1330 aa20.49■□□□□ 0.87
DDX39B-213ENST00000456976 RAPGEF6Q8TEU7 1601 aa20.48■□□□□ 0.87
DDX39B-213ENST00000456976 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.45■□□□□ 0.86
DDX39B-213ENST00000456976 PKD2Q13563 968 aa20.45■□□□□ 0.86
DDX39B-213ENST00000456976 EFCAB2Q5VUJ9 269 aa20.45■□□□□ 0.86
DDX39B-213ENST00000456976 NUP153P49790 1475 aaKnown RBP20.44■□□□□ 0.86
DDX39B-213ENST00000456976 PLCH2O75038 1416 aa20.42■□□□□ 0.86
DDX39B-213ENST00000456976 CAMSAP1Q5T5Y3 1602 aa20.39■□□□□ 0.86
DDX39B-213ENST00000456976 AFAP1Q8N556 730 aa20.38■□□□□ 0.85
DDX39B-213ENST00000456976 PRXQ9BXM0 1461 aa20.37■□□□□ 0.85
DDX39B-213ENST00000456976 PPP6R1Q9UPN7 881 aa20.37■□□□□ 0.85
DDX39B-213ENST00000456976 C3P01024 1663 aa20.35■□□□□ 0.85
DDX39B-213ENST00000456976 CNTLNQ9NXG0 1405 aa20.35■□□□□ 0.85
DDX39B-213ENST00000456976 ZNF518AQ6AHZ1 1483 aa20.34■□□□□ 0.85
DDX39B-213ENST00000456976 NPATQ14207 1427 aa20.31■□□□□ 0.84
DDX39B-213ENST00000456976 RANGAP1P46060 587 aaPredicted RBP20.31■□□□□ 0.84
DDX39B-213ENST00000456976 SAMD9Q5K651 1589 aa20.29■□□□□ 0.84
DDX39B-213ENST00000456976 AGLP35573 1532 aa20.27■□□□□ 0.84
DDX39B-213ENST00000456976 PLA2R1Q13018 1463 aa20.27■□□□□ 0.84
DDX39B-213ENST00000456976 ZMYM3Q14202 1370 aa20.26■□□□□ 0.83
DDX39B-213ENST00000456976 REREQ9P2R6 1566 aa20.25■□□□□ 0.83
DDX39B-213ENST00000456976 PTPRKQ15262 1439 aa20.24■□□□□ 0.83
DDX39B-213ENST00000456976 RGS17Q9UGC6 210 aaPredicted RBP20.23■□□□□ 0.83
DDX39B-213ENST00000456976 SENP3Q9H4L4 574 aaPredicted RBP20.22■□□□□ 0.83
DDX39B-213ENST00000456976 CDK11AQ9UQ88 783 aaPredicted RBP20.22■□□□□ 0.83
DDX39B-213ENST00000456976 TCOF1Q13428 1488 aaKnown RBP20.22■□□□□ 0.83
DDX39B-213ENST00000456976 DIP2CQ9Y2E4 1556 aa20.21■□□□□ 0.83
DDX39B-213ENST00000456976 MLH3Q9UHC1 1453 aa20.2■□□□□ 0.82
DDX39B-213ENST00000456976 CPS1P31327 1500 aa20.2■□□□□ 0.82
DDX39B-213ENST00000456976 KDM5CP41229 1560 aa20.2■□□□□ 0.82
DDX39B-213ENST00000456976 ATP1B4Q9UN42 357 aaPredicted RBP20.16■□□□□ 0.82
DDX39B-213ENST00000456976 SHANK2Q9UPX8 1470 aa20.16■□□□□ 0.82
DDX39B-213ENST00000456976 ARHGAP5Q13017 1502 aa20.14■□□□□ 0.81
DDX39B-213ENST00000456976 CSRNP3Q8WYN3 585 aa20.11■□□□□ 0.81
DDX39B-213ENST00000456976 ABCA6Q8N139 1617 aa20.11■□□□□ 0.81
DDX39B-213ENST00000456976 CDK13Q14004 1512 aaKnown RBP20.11■□□□□ 0.81
DDX39B-213ENST00000456976 POTEAQ6S8J7 498 aa20.1■□□□□ 0.81
DDX39B-213ENST00000456976 MYO5CQ9NQX4 1742 aa20.1■□□□□ 0.81
DDX39B-213ENST00000456976 CEP170BQ9Y4F5 1589 aaPredicted RBP20.09■□□□□ 0.81
DDX39B-213ENST00000456976 MROH2AA6NES4 1674 aa20.07■□□□□ 0.8
DDX39B-213ENST00000456976 ANKLE2Q86XL3 938 aa20.06■□□□□ 0.8
DDX39B-213ENST00000456976 ZNF142P52746 1687 aaPredicted RBP20.04■□□□□ 0.8
DDX39B-213ENST00000456976 GGT6Q6P531 493 aa20.04■□□□□ 0.8
DDX39B-213ENST00000456976 MYO3AQ8NEV4 1616 aa20.03■□□□□ 0.8
DDX39B-213ENST00000456976 SUPT6HQ7KZ85 1726 aaKnown RBP20.03■□□□□ 0.8
DDX39B-213ENST00000456976 A2ML1A8K2U0 1454 aa20.02■□□□□ 0.8
DDX39B-213ENST00000456976 CLIP1P30622 1438 aa20.02■□□□□ 0.79
DDX39B-213ENST00000456976 THEMISQ8N1K5 641 aaPredicted RBP19.98■□□□□ 0.79
DDX39B-213ENST00000456976 TROQ12816 1431 aaPredicted RBP19.98■□□□□ 0.79
DDX39B-213ENST00000456976 SPAG9O60271 1321 aaKnown RBP19.98■□□□□ 0.79
DDX39B-213ENST00000456976 KIF14Q15058 1648 aa19.98■□□□□ 0.79
DDX39B-213ENST00000456976 ALKQ9UM73 1620 aa19.98■□□□□ 0.79
DDX39B-213ENST00000456976 DNMT1P26358 1616 aaKnown RBP19.94■□□□□ 0.78
DDX39B-213ENST00000456976 KIDINS220Q9ULH0 1771 aa19.93■□□□□ 0.78
DDX39B-213ENST00000456976 CLTCQ00610 1675 aaKnown RBP19.93■□□□□ 0.78
DDX39B-213ENST00000456976 VWDEQ8N2E2 1590 aa19.92■□□□□ 0.78
DDX39B-213ENST00000456976 UPF1Q92900 1129 aaKnown RBP eCLIP19.92■□□□□ 0.78
DDX39B-213ENST00000456976 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.92■□□□□ 0.78
DDX39B-213ENST00000456976 ABCC1P33527 1531 aa19.92■□□□□ 0.78
DDX39B-213ENST00000456976 ZNF777Q9ULD5 760 aaPredicted RBP19.91■□□□□ 0.78
DDX39B-213ENST00000456976 NPHP4O75161 1426 aaPredicted RBP19.91■□□□□ 0.78
DDX39B-213ENST00000456976 FMN1Q68DA7 1419 aa19.9■□□□□ 0.78
DDX39B-213ENST00000456976 NEURL4Q96JN8 1562 aa19.9■□□□□ 0.78
DDX39B-213ENST00000456976 TNRQ92752 1358 aa19.89■□□□□ 0.77
DDX39B-213ENST00000456976 LRRC7Q96NW7 1537 aa19.89■□□□□ 0.77
DDX39B-213ENST00000456976 FBXO31Q5XUX0 539 aaPredicted RBP19.87■□□□□ 0.77
DDX39B-213ENST00000456976 A2MP01023 1474 aa19.86■□□□□ 0.77
DDX39B-213ENST00000456976 EEA1Q15075 1411 aa19.86■□□□□ 0.77
DDX39B-213ENST00000456976 HNRNPMP52272 730 aaKnown RBP eCLIP19.86■□□□□ 0.77
DDX39B-213ENST00000456976 MED14O60244 1454 aa19.86■□□□□ 0.77
DDX39B-213ENST00000456976 POLR1AO95602 1720 aaPredicted RBP19.85■□□□□ 0.77
DDX39B-213ENST00000456976 CDC42BPBQ9Y5S2 1711 aa19.85■□□□□ 0.77
DDX39B-213ENST00000456976 ITSN2Q9NZM3 1697 aa19.84■□□□□ 0.77
DDX39B-213ENST00000456976 SAMD9LQ8IVG5 1584 aa19.84■□□□□ 0.77
DDX39B-213ENST00000456976 RNF17Q9BXT8 1623 aaKnown RBP19.83■□□□□ 0.76
DDX39B-213ENST00000456976 FAM135BQ49AJ0 1406 aa19.82■□□□□ 0.76
DDX39B-213ENST00000456976 FAM135AQ9P2D6 1515 aa19.81■□□□□ 0.76
DDX39B-213ENST00000456976 SRCAPQ6ZRS2 3230 aa19.79■□□□□ 0.76
DDX39B-213ENST00000456976 PREX2Q70Z35 1606 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms