RNA–Protein interactions for RNA: ENST00000456009.4

CCDC144A-210, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 5 BASIC

Gene CCDC144A, Length 2,306 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-210ENST00000456009 PRG4Q92954 1404 aaPredicted RBP24.69■■□□□ 1.54
CCDC144A-210ENST00000456009 FBLN2P98095 1184 aa24.69■■□□□ 1.54
CCDC144A-210ENST00000456009 CDK11AQ9UQ88 783 aaPredicted RBP24.69■■□□□ 1.54
CCDC144A-210ENST00000456009 ROCK1Q13464 1354 aa24.69■■□□□ 1.54
CCDC144A-210ENST00000456009 BCANQ96GW7 911 aa24.68■■□□□ 1.54
CCDC144A-210ENST00000456009 FKBP8Q14318 412 aa24.68■■□□□ 1.54
CCDC144A-210ENST00000456009 ANKRD30BQ9BXX2 1392 aa24.66■■□□□ 1.54
CCDC144A-210ENST00000456009 EIF4G2P78344 907 aaKnown RBP eCLIP24.66■■□□□ 1.54
CCDC144A-210ENST00000456009 DNMT1P26358 1616 aaKnown RBP24.65■■□□□ 1.54
CCDC144A-210ENST00000456009 PLB1Q6P1J6 1458 aa24.65■■□□□ 1.54
CCDC144A-210ENST00000456009 ERCC6Q03468 1493 aa24.64■■□□□ 1.54
CCDC144A-210ENST00000456009 SLC4A1APQ9BWU0 796 aaKnown RBP24.63■■□□□ 1.53
CCDC144A-210ENST00000456009 C11orf95C9JLR9 678 aaPredicted RBP24.62■■□□□ 1.53
CCDC144A-210ENST00000456009 NBPF8Q3BBV2 869 aa24.62■■□□□ 1.53
CCDC144A-210ENST00000456009 CEP170Q5SW79 1584 aa24.62■■□□□ 1.53
CCDC144A-210ENST00000456009 CFDP1Q9UEE9 299 aaPredicted RBP24.62■■□□□ 1.53
CCDC144A-210ENST00000456009 TROQ12816 1431 aaPredicted RBP24.6■■□□□ 1.53
CCDC144A-210ENST00000456009 ZNF777Q9ULD5 760 aaPredicted RBP24.6■■□□□ 1.53
CCDC144A-210ENST00000456009 MAGI1Q96QZ7 1491 aaPredicted RBP24.59■■□□□ 1.53
CCDC144A-210ENST00000456009 JPH4Q96JJ6 628 aa24.58■■□□□ 1.53
CCDC144A-210ENST00000456009 TSHZ2Q9NRE2 1034 aa24.58■■□□□ 1.53
CCDC144A-210ENST00000456009 SYNJ2O15056 1496 aa24.58■■□□□ 1.53
CCDC144A-210ENST00000456009 RPRD2Q5VT52 1461 aaKnown RBP24.58■■□□□ 1.53
CCDC144A-210ENST00000456009 GPATCH8Q9UKJ3 1502 aaKnown RBP24.56■■□□□ 1.52
CCDC144A-210ENST00000456009 CAMSAP2Q08AD1 1489 aa24.55■■□□□ 1.52
CCDC144A-210ENST00000456009 NCOA1Q15788 1441 aa24.53■■□□□ 1.52
CCDC144A-210ENST00000456009 TEX14Q8IWB6 1497 aa24.53■■□□□ 1.52
CCDC144A-210ENST00000456009 KIF14Q15058 1648 aa24.53■■□□□ 1.52
CCDC144A-210ENST00000456009 CCDC184Q52MB2 194 aa24.51■■□□□ 1.51
CCDC144A-210ENST00000456009 PZPP20742 1482 aa24.5■■□□□ 1.51
CCDC144A-210ENST00000456009 HNRNPUQ00839 825 aaKnown RBP eCLIP24.5■■□□□ 1.51
CCDC144A-210ENST00000456009 CCDC7Q96M83 1385 aa24.48■■□□□ 1.51
CCDC144A-210ENST00000456009 NUP160Q12769 1436 aa24.48■■□□□ 1.51
CCDC144A-210ENST00000456009 CARMIL2Q6F5E8 1435 aa24.48■■□□□ 1.51
CCDC144A-210ENST00000456009 CNTLNQ9NXG0 1405 aa24.47■■□□□ 1.51
CCDC144A-210ENST00000456009 NEFLP07196 543 aa24.46■■□□□ 1.51
CCDC144A-210ENST00000456009 SPATA31E1Q6ZUB1 1445 aa24.44■■□□□ 1.5
CCDC144A-210ENST00000456009 PLEKHD1A6NEE1 506 aa24.42■■□□□ 1.5
CCDC144A-210ENST00000456009 ITSN2Q9NZM3 1697 aa24.42■■□□□ 1.5
CCDC144A-210ENST00000456009 PKD2Q13563 968 aa24.41■■□□□ 1.5
CCDC144A-210ENST00000456009 ADCY10Q96PN6 1610 aa24.41■■□□□ 1.5
CCDC144A-210ENST00000456009 PRKRIP1Q9H875 184 aaPredicted RBP24.41■■□□□ 1.5
CCDC144A-210ENST00000456009 KIF7Q2M1P5 1343 aa24.4■■□□□ 1.5
CCDC144A-210ENST00000456009 ADGRL2O95490 1459 aa24.39■■□□□ 1.5
CCDC144A-210ENST00000456009 ATP10BO94823 1461 aa24.39■■□□□ 1.49
CCDC144A-210ENST00000456009 ANKRD30AQ9BXX3 1397 aa24.38■■□□□ 1.49
CCDC144A-210ENST00000456009 KIAA1107Q9UPP5 1409 aa24.37■■□□□ 1.49
CCDC144A-210ENST00000456009 ADGBQ8N7X0 1667 aa24.36■■□□□ 1.49
CCDC144A-210ENST00000456009 ZNF326Q5BKZ1 582 aaKnown RBP24.35■■□□□ 1.49
CCDC144A-210ENST00000456009 ANKRD50Q9ULJ7 1429 aa24.35■■□□□ 1.49
CCDC144A-210ENST00000456009 ABCA8O94911 1581 aa24.35■■□□□ 1.49
CCDC144A-210ENST00000456009 CROCC2H7BZ55 1655 aa24.34■■□□□ 1.49
CCDC144A-210ENST00000456009 ABCC10Q5T3U5 1492 aa24.34■■□□□ 1.49
CCDC144A-210ENST00000456009 FAM9BQ8IZU0 186 aa24.32■■□□□ 1.48
CCDC144A-210ENST00000456009 CDC42BPAQ5VT25 1732 aa24.31■■□□□ 1.48
CCDC144A-210ENST00000456009 HNRNPMP52272 730 aaKnown RBP eCLIP24.3■■□□□ 1.48
CCDC144A-210ENST00000456009 MBD5Q9P267 1494 aa24.3■■□□□ 1.48
CCDC144A-210ENST00000456009 IRX6P78412 446 aaPredicted RBP24.29■■□□□ 1.48
CCDC144A-210ENST00000456009 MRS2Q9HD23 443 aa24.29■■□□□ 1.48
CCDC144A-210ENST00000456009 NUP155O75694 1391 aa24.29■■□□□ 1.48
CCDC144A-210ENST00000456009 C9orf84Q5VXU9 1444 aa24.28■■□□□ 1.48
CCDC144A-210ENST00000456009 TSPY4P0CV99 314 aa24.26■■□□□ 1.47
CCDC144A-210ENST00000456009 TSPY10P0CW01 314 aa24.26■■□□□ 1.47
CCDC144A-210ENST00000456009 USP47Q96K76 1375 aa24.25■■□□□ 1.47
CCDC144A-210ENST00000456009 CNGB1Q14028 1251 aaPredicted RBP24.24■■□□□ 1.47
CCDC144A-210ENST00000456009 POLR3GLQ9BT43 218 aa24.23■■□□□ 1.47
CCDC144A-210ENST00000456009 PTPRGP23470 1445 aa24.22■■□□□ 1.47
CCDC144A-210ENST00000456009 SHANK2Q9UPX8 1470 aa24.2■■□□□ 1.47
CCDC144A-210ENST00000456009 BCORL1Q5H9F3 1711 aa24.2■■□□□ 1.46
CCDC144A-210ENST00000456009 POLR1AO95602 1720 aaPredicted RBP24.19■■□□□ 1.46
CCDC144A-210ENST00000456009 KIF15Q9NS87 1388 aa24.19■■□□□ 1.46
CCDC144A-210ENST00000456009 DHX29Q7Z478 1369 aaKnown RBP24.18■■□□□ 1.46
CCDC144A-210ENST00000456009 MYT1Q01538 1121 aa24.18■■□□□ 1.46
CCDC144A-210ENST00000456009 KDM2AQ9Y2K7 1162 aa24.18■■□□□ 1.46
CCDC144A-210ENST00000456009 KDM5CP41229 1560 aa24.14■■□□□ 1.45
CCDC144A-210ENST00000456009 RBM19Q9Y4C8 960 aaKnown RBP24.13■■□□□ 1.45
CCDC144A-210ENST00000456009 UHRF1BP1Q6BDS2 1440 aa24.13■■□□□ 1.45
CCDC144A-210ENST00000456009 CARD11Q9BXL7 1154 aa24.13■■□□□ 1.45
CCDC144A-210ENST00000456009 ZBED9Q6R2W3 1325 aa24.13■■□□□ 1.45
CCDC144A-210ENST00000456009 DCAF11Q8TEB1 546 aa24.12■■□□□ 1.45
CCDC144A-210ENST00000456009 KDM5DQ9BY66 1539 aa24.1■■□□□ 1.45
CCDC144A-210ENST00000456009 SAMD9LQ8IVG5 1584 aa24.09■■□□□ 1.45
CCDC144A-210ENST00000456009 ARHGEF5Q12774 1597 aa24.09■■□□□ 1.45
CCDC144A-210ENST00000456009 RALGAPBQ86X10 1494 aa24.08■■□□□ 1.45
CCDC144A-210ENST00000456009 CDC42BPBQ9Y5S2 1711 aa24.08■■□□□ 1.44
CCDC144A-210ENST00000456009 ST20-MTHFSA0A0A6YYL1 179 aa24.07■■□□□ 1.44
CCDC144A-210ENST00000456009 CCDC141Q6ZP82 1450 aa24.06■■□□□ 1.44
CCDC144A-210ENST00000456009 ARID4BQ4LE39 1312 aaPredicted RBP24.05■■□□□ 1.44
CCDC144A-210ENST00000456009 ARHGEF12Q9NZN5 1544 aa24.03■■□□□ 1.44
CCDC144A-210ENST00000456009 SENP3-EIF4A1A0A087X0R7 540 aa24.02■■□□□ 1.44
CCDC144A-210ENST00000456009 PREX2Q70Z35 1606 aa24.02■■□□□ 1.44
CCDC144A-210ENST00000456009 FAM135AQ9P2D6 1515 aa24.02■■□□□ 1.44
CCDC144A-210ENST00000456009 RSPH4AQ5TD94 716 aa24.01■■□□□ 1.43
CCDC144A-210ENST00000456009 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24■■□□□ 1.43
CCDC144A-210ENST00000456009 SYCP2Q9BX26 1530 aa23.99■■□□□ 1.43
CCDC144A-210ENST00000456009 RGL3Q3MIN7 710 aa23.99■■□□□ 1.43
CCDC144A-210ENST00000456009 CHD1O14646 1710 aa23.98■■□□□ 1.43
CCDC144A-210ENST00000456009 TTC37Q6PGP7 1564 aa23.98■■□□□ 1.43
CCDC144A-210ENST00000456009 PPP4R2Q9NY27 417 aa23.98■■□□□ 1.43
CCDC144A-210ENST00000456009 ERICH6BQ5W0A0 696 aa23.97■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms