RNA–Protein interactions for RNA: ENST00000454849.5

MSH2-203, Transcript of mutS homolog 2, humanhuman

TSL 4

Gene MSH2, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-203ENST00000454849 RICTORQ6R327 1708 aa39.52■■■■□ 3.92
MSH2-203ENST00000454849 VPS8Q8N3P4 1428 aa39.51■■■■□ 3.92
MSH2-203ENST00000454849 CDC42BPBQ9Y5S2 1711 aa39.49■■■■□ 3.91
MSH2-203ENST00000454849 ZNF777Q9ULD5 760 aaPredicted RBP39.48■■■■□ 3.91
MSH2-203ENST00000454849 POGZQ7Z3K3 1410 aa39.45■■■■□ 3.91
MSH2-203ENST00000454849 AFAP1Q8N556 730 aa39.44■■■■□ 3.9
MSH2-203ENST00000454849 PREX2Q70Z35 1606 aa39.43■■■■□ 3.9
MSH2-203ENST00000454849 CDC42BPAQ5VT25 1732 aa39.42■■■■□ 3.9
MSH2-203ENST00000454849 ARID4BQ4LE39 1312 aaPredicted RBP39.4■■■■□ 3.9
MSH2-203ENST00000454849 GPATCH8Q9UKJ3 1502 aaKnown RBP39.4■■■■□ 3.9
MSH2-203ENST00000454849 CCNB3Q8WWL7 1395 aa39.4■■■■□ 3.9
MSH2-203ENST00000454849 YEATS2Q9ULM3 1422 aa39.4■■■■□ 3.9
MSH2-203ENST00000454849 EHBP1L1Q8N3D4 1523 aa39.35■■■■□ 3.89
MSH2-203ENST00000454849 CFDP1Q9UEE9 299 aaPredicted RBP39.35■■■■□ 3.89
MSH2-203ENST00000454849 MYT1LQ9UL68 1186 aa39.35■■■■□ 3.89
MSH2-203ENST00000454849 ZMYM4Q5VZL5 1548 aa39.35■■■■□ 3.89
MSH2-203ENST00000454849 ARHGEF12Q9NZN5 1544 aa39.34■■■■□ 3.89
MSH2-203ENST00000454849 ARHGEF40Q8TER5 1519 aa39.33■■■■□ 3.89
MSH2-203ENST00000454849 TIAM1Q13009 1591 aa39.33■■■■□ 3.89
MSH2-203ENST00000454849 ZFYVE16Q7Z3T8 1539 aa39.32■■■■□ 3.89
MSH2-203ENST00000454849 TRAPPC8Q9Y2L5 1435 aa39.31■■■■□ 3.88
MSH2-203ENST00000454849 HNRNPMP52272 730 aaKnown RBP eCLIP39.28■■■■□ 3.88
MSH2-203ENST00000454849 KANK4Q5T7N3 995 aaPredicted RBP39.28■■■■□ 3.88
MSH2-203ENST00000454849 ZNF518AQ6AHZ1 1483 aa39.28■■■■□ 3.88
MSH2-203ENST00000454849 ABCC1P33527 1531 aa39.27■■■■□ 3.88
MSH2-203ENST00000454849 MAGI2Q86UL8 1455 aa39.25■■■■□ 3.87
MSH2-203ENST00000454849 ZNF644Q9H582 1327 aaPredicted RBP39.24■■■■□ 3.87
MSH2-203ENST00000454849 SAMD9LQ8IVG5 1584 aa39.24■■■■□ 3.87
MSH2-203ENST00000454849 NCOA2Q15596 1464 aa39.21■■■■□ 3.87
MSH2-203ENST00000454849 LRRC9Q6ZRR7 1453 aa39.2■■■■□ 3.87
MSH2-203ENST00000454849 ITSN2Q9NZM3 1697 aa39.19■■■■□ 3.86
MSH2-203ENST00000454849 MLECQ14165 292 aa39.18■■■■□ 3.86
MSH2-203ENST00000454849 SYCP2Q9BX26 1530 aa39.18■■■■□ 3.86
MSH2-203ENST00000454849 KDM5CP41229 1560 aa39.17■■■■□ 3.86
MSH2-203ENST00000454849 SIGLEC1Q9BZZ2 1709 aa39.16■■■■□ 3.86
MSH2-203ENST00000454849 SUPT6HQ7KZ85 1726 aaKnown RBP39.15■■■■□ 3.86
MSH2-203ENST00000454849 ATP10AO60312 1499 aa39.15■■■■□ 3.86
MSH2-203ENST00000454849 APLP2Q06481 763 aa39.14■■■■□ 3.86
MSH2-203ENST00000454849 BCORL1Q5H9F3 1711 aa39.1■■■■□ 3.85
MSH2-203ENST00000454849 HECW2Q9P2P5 1572 aa39.1■■■■□ 3.85
MSH2-203ENST00000454849 MAP3K1Q13233 1512 aa39.09■■■■□ 3.85
MSH2-203ENST00000454849 ADAMTSL3P82987 1691 aa39.08■■■■□ 3.85
MSH2-203ENST00000454849 C9orf84Q5VXU9 1444 aa39.07■■■■□ 3.85
MSH2-203ENST00000454849 MLH3Q9UHC1 1453 aa39.07■■■■□ 3.85
MSH2-203ENST00000454849 SPAG9O60271 1321 aaKnown RBP39.06■■■■□ 3.84
MSH2-203ENST00000454849 KIAA1107Q9UPP5 1409 aa39.06■■■■□ 3.84
MSH2-203ENST00000454849 PLEKHH2Q8IVE3 1493 aa39.05■■■■□ 3.84
MSH2-203ENST00000454849 PLPPR3Q6T4P5 718 aa39.03■■■■□ 3.84
MSH2-203ENST00000454849 DIP2CQ9Y2E4 1556 aa39.03■■■■□ 3.84
MSH2-203ENST00000454849 ABCA6Q8N139 1617 aa39.02■■■■□ 3.84
MSH2-203ENST00000454849 MADDQ8WXG6 1647 aa39.01■■■■□ 3.84
MSH2-203ENST00000454849 KIDINS220Q9ULH0 1771 aa38.98■■■■□ 3.83
MSH2-203ENST00000454849 PTPRMP28827 1452 aa38.98■■■■□ 3.83
MSH2-203ENST00000454849 MBD5Q9P267 1494 aa38.95■■■■□ 3.83
MSH2-203ENST00000454849 CAMSAP2Q08AD1 1489 aa38.93■■■■□ 3.82
MSH2-203ENST00000454849 RIMS1Q86UR5 1692 aaKnown RBP38.9■■■■□ 3.82
MSH2-203ENST00000454849 ATP7AQ04656 1500 aa38.88■■■■□ 3.81
MSH2-203ENST00000454849 MYOM3Q5VTT5 1437 aa38.84■■■■□ 3.81
MSH2-203ENST00000454849 INO80Q9ULG1 1556 aaPredicted RBP38.82■■■■□ 3.8
MSH2-203ENST00000454849 REREQ9P2R6 1566 aa38.8■■■■□ 3.8
MSH2-203ENST00000454849 CCDC141Q6ZP82 1450 aa38.78■■■■□ 3.8
MSH2-203ENST00000454849 FER1L4A9Z1Z3 1794 aa38.77■■■■□ 3.8
MSH2-203ENST00000454849 CEBPAP49715 358 aaPredicted RBP38.76■■■■□ 3.8
MSH2-203ENST00000454849 AGLP35573 1532 aa38.74■■■■□ 3.79
MSH2-203ENST00000454849 A2MP01023 1474 aa38.73■■■■□ 3.79
MSH2-203ENST00000454849 RSPH4AQ5TD94 716 aa38.73■■■■□ 3.79
MSH2-203ENST00000454849 MIA2Q96PC5 1412 aa38.72■■■■□ 3.79
MSH2-203ENST00000454849 TSPY4P0CV99 314 aa38.71■■■■□ 3.79
MSH2-203ENST00000454849 TSPY10P0CW01 314 aa38.71■■■■□ 3.79
MSH2-203ENST00000454849 PPARGC1BQ86YN6 1023 aaKnown RBP38.71■■■■□ 3.79
MSH2-203ENST00000454849 RTEL1-TNFRSF6BF6WH68 1400 aa38.69■■■■□ 3.78
MSH2-203ENST00000454849 ESF1Q9H501 851 aaKnown RBP38.67■■■■□ 3.78
MSH2-203ENST00000454849 ARHGEF5Q12774 1597 aa38.66■■■■□ 3.78
MSH2-203ENST00000454849 GGT6Q6P531 493 aa38.65■■■■□ 3.78
MSH2-203ENST00000454849 FGD6Q6ZV73 1430 aa38.61■■■■□ 3.77
MSH2-203ENST00000454849 PLXNC1O60486 1568 aa38.61■■■■□ 3.77
MSH2-203ENST00000454849 PTPN23Q9H3S7 1636 aa38.6■■■■□ 3.77
MSH2-203ENST00000454849 ADGBQ8N7X0 1667 aa38.59■■■■□ 3.77
MSH2-203ENST00000454849 DHX29Q7Z478 1369 aaKnown RBP38.58■■■■□ 3.77
MSH2-203ENST00000454849 KIF3BO15066 747 aa38.54■■■■□ 3.76
MSH2-203ENST00000454849 FAM50AQ14320 339 aaKnown RBP38.51■■■■□ 3.76
MSH2-203ENST00000454849 HSPA2P54652 639 aa38.5■■■■□ 3.75
MSH2-203ENST00000454849 ABCC5O15440 1437 aa38.49■■■■□ 3.75
MSH2-203ENST00000454849 LMTK3Q96Q04 1460 aa38.47■■■■□ 3.75
MSH2-203ENST00000454849 TCOF1Q13428 1488 aaKnown RBP38.47■■■■□ 3.75
MSH2-203ENST00000454849 CHIC2Q9UKJ5 165 aa38.46■■■■□ 3.75
MSH2-203ENST00000454849 MAST1Q9Y2H9 1570 aa38.44■■■■□ 3.74
MSH2-203ENST00000454849 CNTLNQ9NXG0 1405 aa38.44■■■■□ 3.74
MSH2-203ENST00000454849 C3P01024 1663 aa38.43■■■■□ 3.74
MSH2-203ENST00000454849 RRP7BPQ9NSQ0 103 aa38.43■■■■□ 3.74
MSH2-203ENST00000454849 DAPK1P53355 1430 aa38.42■■■■□ 3.74
MSH2-203ENST00000454849 ZMYM3Q14202 1370 aa38.42■■■■□ 3.74
MSH2-203ENST00000454849 CLTCQ00610 1675 aaKnown RBP38.39■■■■□ 3.74
MSH2-203ENST00000454849 DNMT1P26358 1616 aaKnown RBP38.35■■■■□ 3.73
MSH2-203ENST00000454849 CROCC2H7BZ55 1655 aa38.33■■■■□ 3.73
MSH2-203ENST00000454849 KIF15Q9NS87 1388 aa38.32■■■■□ 3.73
MSH2-203ENST00000454849 PPP6R1Q9UPN7 881 aa38.32■■■■□ 3.72
MSH2-203ENST00000454849 SHANK2Q9UPX8 1470 aa38.31■■■■□ 3.72
MSH2-203ENST00000454849 WASHC2CQ9Y4E1 1318 aa38.3■■■■□ 3.72
MSH2-203ENST00000454849 MROH2AA6NES4 1674 aa38.27■■■■□ 3.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms