RNA–Protein interactions for RNA: ENST00000454497.6

OTUD4-202, Transcript of OTU deubiquitinase 4, humanhuman

TSL 2 BASIC

Gene OTUD4, Length 7,069 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUD4-202ENST00000454497 RAPGEF6Q8TEU7 1601 aa8□□□□□ -1.13
OTUD4-202ENST00000454497 PLCH2O75038 1416 aa8□□□□□ -1.13
OTUD4-202ENST00000454497 CCDC141Q6ZP82 1450 aa8□□□□□ -1.13
OTUD4-202ENST00000454497 DAPK1P53355 1430 aa8□□□□□ -1.13
OTUD4-202ENST00000454497 SHROOM2Q13796 1616 aa7.99□□□□□ -1.13
OTUD4-202ENST00000454497 TEX14Q8IWB6 1497 aa7.99□□□□□ -1.13
OTUD4-202ENST00000454497 ATP10AO60312 1499 aa7.99□□□□□ -1.13
OTUD4-202ENST00000454497 ABCC5O15440 1437 aa7.98□□□□□ -1.13
OTUD4-202ENST00000454497 CLASP1Q7Z460 1538 aa7.98□□□□□ -1.13
OTUD4-202ENST00000454497 ARHGEF5Q12774 1597 aa7.97□□□□□ -1.13
OTUD4-202ENST00000454497 CEP170Q5SW79 1584 aa7.97□□□□□ -1.13
OTUD4-202ENST00000454497 PPP6R1Q9UPN7 881 aa7.97□□□□□ -1.13
OTUD4-202ENST00000454497 MBD5Q9P267 1494 aa7.96□□□□□ -1.13
OTUD4-202ENST00000454497 PBRM1Q86U86 1689 aa7.96□□□□□ -1.14
OTUD4-202ENST00000454497 ROCK2O75116 1388 aaKnown RBP7.95□□□□□ -1.14
OTUD4-202ENST00000454497 ARHGEF12Q9NZN5 1544 aa7.95□□□□□ -1.14
OTUD4-202ENST00000454497 KIF15Q9NS87 1388 aa7.94□□□□□ -1.14
OTUD4-202ENST00000454497 NEO1Q92859 1461 aa7.94□□□□□ -1.14
OTUD4-202ENST00000454497 ADCY10Q96PN6 1610 aa7.94□□□□□ -1.14
OTUD4-202ENST00000454497 ANKRD30BQ9BXX2 1392 aa7.94□□□□□ -1.14
OTUD4-202ENST00000454497 C9orf84Q5VXU9 1444 aa7.94□□□□□ -1.14
OTUD4-202ENST00000454497 RPRD2Q5VT52 1461 aaKnown RBP7.94□□□□□ -1.14
OTUD4-202ENST00000454497 FAM135AQ9P2D6 1515 aa7.93□□□□□ -1.14
OTUD4-202ENST00000454497 MAPKBP1O60336 1514 aa7.93□□□□□ -1.14
OTUD4-202ENST00000454497 KDM5DQ9BY66 1539 aa7.93□□□□□ -1.14
OTUD4-202ENST00000454497 PPARGC1BQ86YN6 1023 aaKnown RBP7.93□□□□□ -1.14
OTUD4-202ENST00000454497 ERBINQ96RT1 1412 aa7.93□□□□□ -1.14
OTUD4-202ENST00000454497 WASHC2AQ641Q2 1341 aa7.93□□□□□ -1.14
OTUD4-202ENST00000454497 WASHC2CQ9Y4E1 1318 aa7.93□□□□□ -1.14
OTUD4-202ENST00000454497 KTN1Q86UP2 1357 aaKnown RBP7.92□□□□□ -1.14
OTUD4-202ENST00000454497 KIF14Q15058 1648 aa7.92□□□□□ -1.14
OTUD4-202ENST00000454497 CCER2I3L3R5 266 aa7.92□□□□□ -1.14
OTUD4-202ENST00000454497 DIEXFQ68CQ4 756 aaKnown RBP7.92□□□□□ -1.14
OTUD4-202ENST00000454497 MPHOSPH9Q99550 1183 aa7.92□□□□□ -1.14
OTUD4-202ENST00000454497 CAMSAP2Q08AD1 1489 aa7.91□□□□□ -1.14
OTUD4-202ENST00000454497 SLC4A1APQ9BWU0 796 aaKnown RBP7.91□□□□□ -1.14
OTUD4-202ENST00000454497 PTPN23Q9H3S7 1636 aa7.91□□□□□ -1.14
OTUD4-202ENST00000454497 ITSN2Q9NZM3 1697 aa7.91□□□□□ -1.14
OTUD4-202ENST00000454497 CDK13Q14004 1512 aaKnown RBP7.91□□□□□ -1.14
OTUD4-202ENST00000454497 DNMT1P26358 1616 aaKnown RBP7.9□□□□□ -1.14
OTUD4-202ENST00000454497 PTPRKQ15262 1439 aa7.9□□□□□ -1.14
OTUD4-202ENST00000454497 MAST1Q9Y2H9 1570 aa7.9□□□□□ -1.14
OTUD4-202ENST00000454497 KANK1Q14678 1352 aa7.9□□□□□ -1.14
OTUD4-202ENST00000454497 EIF4G2P78344 907 aaKnown RBP eCLIP7.9□□□□□ -1.15
OTUD4-202ENST00000454497 MAGI3Q5TCQ9 1506 aa7.9□□□□□ -1.15
OTUD4-202ENST00000454497 SPAG9O60271 1321 aaKnown RBP7.89□□□□□ -1.15
OTUD4-202ENST00000454497 GPRASP1Q5JY77 1395 aa7.89□□□□□ -1.15
OTUD4-202ENST00000454497 MAGI2Q86UL8 1455 aa7.89□□□□□ -1.15
OTUD4-202ENST00000454497 NUP155O75694 1391 aa7.88□□□□□ -1.15
OTUD4-202ENST00000454497 UHRF1BP1Q6BDS2 1440 aa7.88□□□□□ -1.15
OTUD4-202ENST00000454497 MLH3Q9UHC1 1453 aa7.88□□□□□ -1.15
OTUD4-202ENST00000454497 CDCA8Q53HL2 280 aa7.88□□□□□ -1.15
OTUD4-202ENST00000454497 DHX29Q7Z478 1369 aaKnown RBP7.88□□□□□ -1.15
OTUD4-202ENST00000454497 TRIM52Q96A61 297 aa7.87□□□□□ -1.15
OTUD4-202ENST00000454497 ITGAEP38570 1179 aa7.87□□□□□ -1.15
OTUD4-202ENST00000454497 PUS7Q96PZ0 661 aaKnown RBP7.87□□□□□ -1.15
OTUD4-202ENST00000454497 RPGRIP1LQ68CZ1 1315 aa7.86□□□□□ -1.15
OTUD4-202ENST00000454497 DUOX2Q9NRD8 1548 aa7.85□□□□□ -1.15
OTUD4-202ENST00000454497 INSRP06213 1382 aa7.85□□□□□ -1.15
OTUD4-202ENST00000454497 TTBK1Q5TCY1 1321 aaPredicted RBP7.85□□□□□ -1.15
OTUD4-202ENST00000454497 SBNO2Q9Y2G9 1366 aa7.85□□□□□ -1.15
OTUD4-202ENST00000454497 NEURL4Q96JN8 1562 aa7.85□□□□□ -1.15
OTUD4-202ENST00000454497 ARHGAP31Q2M1Z3 1444 aa7.84□□□□□ -1.15
OTUD4-202ENST00000454497 ZNF518AQ6AHZ1 1483 aa7.84□□□□□ -1.15
OTUD4-202ENST00000454497 NGEFQ8N5V2 710 aa7.84□□□□□ -1.15
OTUD4-202ENST00000454497 CCDC144AA2RUR9 1427 aa7.84□□□□□ -1.15
OTUD4-202ENST00000454497 PLXNC1O60486 1568 aa7.84□□□□□ -1.16
OTUD4-202ENST00000454497 RRP7BPQ9NSQ0 103 aa7.83□□□□□ -1.16
OTUD4-202ENST00000454497 SCAPERQ9BY12 1400 aa7.83□□□□□ -1.16
OTUD4-202ENST00000454497 PKD2Q13563 968 aa7.82□□□□□ -1.16
OTUD4-202ENST00000454497 PRDM15P57071 1507 aaPredicted RBP7.82□□□□□ -1.16
OTUD4-202ENST00000454497 ZNF777Q9ULD5 760 aaPredicted RBP7.82□□□□□ -1.16
OTUD4-202ENST00000454497 SLC52A1Q9NWF4 448 aa7.81□□□□□ -1.16
OTUD4-202ENST00000454497 LMTK2Q8IWU2 1503 aa7.81□□□□□ -1.16
OTUD4-202ENST00000454497 PELP1Q8IZL8 1130 aaKnown RBP7.81□□□□□ -1.16
OTUD4-202ENST00000454497 PTPRTO14522 1441 aa7.81□□□□□ -1.16
OTUD4-202ENST00000454497 L3MBTL2Q969R5 705 aa7.81□□□□□ -1.16
OTUD4-202ENST00000454497 PZPP20742 1482 aa7.81□□□□□ -1.16
OTUD4-202ENST00000454497 DENND4BO75064 1496 aaPredicted RBP7.8□□□□□ -1.16
OTUD4-202ENST00000454497 GCC2Q8IWJ2 1684 aa7.8□□□□□ -1.16
OTUD4-202ENST00000454497 ASXL2Q76L83 1435 aa7.8□□□□□ -1.16
OTUD4-202ENST00000454497 CNTLNQ9NXG0 1405 aa7.8□□□□□ -1.16
OTUD4-202ENST00000454497 ERICH6BQ5W0A0 696 aa7.8□□□□□ -1.16
OTUD4-202ENST00000454497 ARHGAP5Q13017 1502 aa7.8□□□□□ -1.16
OTUD4-202ENST00000454497 FANCAO15360 1455 aa7.79□□□□□ -1.16
OTUD4-202ENST00000454497 ADGRL1O94910 1474 aa7.79□□□□□ -1.16
OTUD4-202ENST00000454497 POGZQ7Z3K3 1410 aa7.79□□□□□ -1.16
OTUD4-202ENST00000454497 ABCC1P33527 1531 aa7.79□□□□□ -1.16
OTUD4-202ENST00000454497 CHIC2Q9UKJ5 165 aa7.79□□□□□ -1.16
OTUD4-202ENST00000454497 CD109Q6YHK3 1445 aa7.79□□□□□ -1.16
OTUD4-202ENST00000454497 ZNF644Q9H582 1327 aaPredicted RBP7.78□□□□□ -1.16
OTUD4-202ENST00000454497 GLI2P10070 1586 aa7.78□□□□□ -1.16
OTUD4-202ENST00000454497 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.77□□□□□ -1.16
OTUD4-202ENST00000454497 ANP32CO43423 234 aa7.77□□□□□ -1.16
OTUD4-202ENST00000454497 NPC1L1Q9UHC9 1359 aa7.77□□□□□ -1.16
OTUD4-202ENST00000454497 RALGAPBQ86X10 1494 aa7.77□□□□□ -1.17
OTUD4-202ENST00000454497 ZMYM4Q5VZL5 1548 aa7.77□□□□□ -1.17
OTUD4-202ENST00000454497 EIF3AQ14152 1382 aaKnown RBP7.77□□□□□ -1.17
OTUD4-202ENST00000454497 AGLP35573 1532 aa7.77□□□□□ -1.17
OTUD4-202ENST00000454497 PREX2Q70Z35 1606 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms