RNA–Protein interactions for RNA: ENST00000452520.1

HMGB1P26-201, Transcript of high mobility group box 1 pseudogene 26, humanhuman

BASIC

Gene HMGB1P26, Length 628 nt, Biotype processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P26-201ENST00000452520 TMEM121BQ9BXQ6 578 aaPredicted RBP11.55□□□□□ -0.56
HMGB1P26-201ENST00000452520 BOLA1Q9Y3E2 137 aa11.55□□□□□ -0.56
HMGB1P26-201ENST00000452520 E2F4Q16254 413 aa11.54□□□□□ -0.56
HMGB1P26-201ENST00000452520 DDX27Q96GQ7 796 aaKnown RBP11.52□□□□□ -0.57
HMGB1P26-201ENST00000452520 L3MBTL3Q96JM7 780 aaPredicted RBP11.52□□□□□ -0.57
HMGB1P26-201ENST00000452520 GPHNQ9NQX3 736 aaPredicted RBP11.52□□□□□ -0.57
HMGB1P26-201ENST00000452520 POTEFA5A3E0 1075 aa11.5□□□□□ -0.57
HMGB1P26-201ENST00000452520 G3V3G9 751 aa11.5□□□□□ -0.57
HMGB1P26-201ENST00000452520 METRNQ9UJH8 293 aa11.49□□□□□ -0.57
HMGB1P26-201ENST00000452520 ARHGEF1Q92888 912 aaKnown RBP11.48□□□□□ -0.57
HMGB1P26-201ENST00000452520 TMC2Q8TDI7 906 aa11.45□□□□□ -0.58
HMGB1P26-201ENST00000452520 CAMK2BQ13554 666 aa11.44□□□□□ -0.58
HMGB1P26-201ENST00000452520 PPP1R15BQ5SWA1 713 aa11.44□□□□□ -0.58
HMGB1P26-201ENST00000452520 DSG2Q14126 1118 aa11.43□□□□□ -0.58
HMGB1P26-201ENST00000452520 PRKCSHP14314 528 aaPredicted RBP11.42□□□□□ -0.58
HMGB1P26-201ENST00000452520 FOXK1P85037 733 aa11.42□□□□□ -0.58
HMGB1P26-201ENST00000452520 C2orf72A6NCS6 295 aa11.41□□□□□ -0.58
HMGB1P26-201ENST00000452520 KIF3CO14782 793 aa11.41□□□□□ -0.58
HMGB1P26-201ENST00000452520 ARIH1Q9Y4X5 557 aaPredicted RBP11.4□□□□□ -0.58
HMGB1P26-201ENST00000452520 TPRNQ4KMQ1 711 aa11.38□□□□□ -0.59
HMGB1P26-201ENST00000452520 TMEM92Q6UXU6 159 aa11.38□□□□□ -0.59
HMGB1P26-201ENST00000452520 PLPP6Q8IY26 295 aa11.36□□□□□ -0.59
HMGB1P26-201ENST00000452520 SEMA3EO15041 775 aa11.34□□□□□ -0.59
HMGB1P26-201ENST00000452520 EMILIN3Q9NT22 766 aa11.34□□□□□ -0.59
HMGB1P26-201ENST00000452520 C3orf67Q6ZVT6 689 aa11.32□□□□□ -0.6
HMGB1P26-201ENST00000452520 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.31□□□□□ -0.6
HMGB1P26-201ENST00000452520 TESPA1A2RU30 521 aaPredicted RBP11.3□□□□□ -0.6
HMGB1P26-201ENST00000452520 DPYSL4O14531 572 aa11.28□□□□□ -0.6
HMGB1P26-201ENST00000452520 TULP1O00294 542 aaPredicted RBP11.26□□□□□ -0.61
HMGB1P26-201ENST00000452520 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.26□□□□□ -0.61
HMGB1P26-201ENST00000452520 SPDYE16A6NNV3 312 aaPredicted RBP11.24□□□□□ -0.61
HMGB1P26-201ENST00000452520 LMOD2Q6P5Q4 547 aa11.24□□□□□ -0.61
HMGB1P26-201ENST00000452520 POTEJP0CG39 1038 aa11.23□□□□□ -0.61
HMGB1P26-201ENST00000452520 MAP3K9P80192 1104 aa11.23□□□□□ -0.61
HMGB1P26-201ENST00000452520 SMYD5Q6GMV2 418 aa11.23□□□□□ -0.61
HMGB1P26-201ENST00000452520 POTEB2H3BUK9 544 aa11.22□□□□□ -0.61
HMGB1P26-201ENST00000452520 PDIA6Q15084 440 aa11.21□□□□□ -0.61
HMGB1P26-201ENST00000452520 OXER1Q8TDS5 423 aa11.21□□□□□ -0.61
HMGB1P26-201ENST00000452520 UPF1Q92900 1129 aaKnown RBP eCLIP11.2□□□□□ -0.62
HMGB1P26-201ENST00000452520 MLLT3P42568 568 aaPredicted RBP11.19□□□□□ -0.62
HMGB1P26-201ENST00000452520 SLC34A2O95436 690 aa11.17□□□□□ -0.62
HMGB1P26-201ENST00000452520 PTCD2Q8WV60 388 aaKnown RBP11.17□□□□□ -0.62
HMGB1P26-201ENST00000452520 TBC1D12O60347 775 aa11.15□□□□□ -0.62
HMGB1P26-201ENST00000452520 MAMSTRQ6ZN01 415 aa11.12□□□□□ -0.63
HMGB1P26-201ENST00000452520 ZC3H15Q8WU90 426 aaKnown RBP11.12□□□□□ -0.63
HMGB1P26-201ENST00000452520 EVI5O60447 810 aa11.11□□□□□ -0.63
HMGB1P26-201ENST00000452520 RBM26Q5T8P6 1007 aaKnown RBP11.11□□□□□ -0.63
HMGB1P26-201ENST00000452520 PTGER2P43116 358 aa11.1□□□□□ -0.63
HMGB1P26-201ENST00000452520 SLAIN1Q8ND83 568 aa11.09□□□□□ -0.63
HMGB1P26-201ENST00000452520 ANO8Q9HCE9 1232 aaPredicted RBP11.09□□□□□ -0.63
HMGB1P26-201ENST00000452520 SCUBE2Q9NQ36 999 aa11.09□□□□□ -0.63
HMGB1P26-201ENST00000452520 GRXCR2A6NFK2 248 aa11.08□□□□□ -0.64
HMGB1P26-201ENST00000452520 PCDHGA4Q9Y5G9 962 aa11.07□□□□□ -0.64
HMGB1P26-201ENST00000452520 DDX12PQ92771 950 aa11.05□□□□□ -0.64
HMGB1P26-201ENST00000452520 OSBPP22059 807 aa11.04□□□□□ -0.64
HMGB1P26-201ENST00000452520 ZNF316A6NFI3 1004 aaPredicted RBP11.03□□□□□ -0.64
HMGB1P26-201ENST00000452520 ZMYND10O75800 440 aa11.02□□□□□ -0.65
HMGB1P26-201ENST00000452520 HOXB3P14651 431 aaPredicted RBP11.02□□□□□ -0.65
HMGB1P26-201ENST00000452520 DOK7Q18PE1 504 aa11.02□□□□□ -0.65
HMGB1P26-201ENST00000452520 GPIHBP1Q8IV16 184 aa11.02□□□□□ -0.65
HMGB1P26-201ENST00000452520 KDM4FA0A1W2PPD8 638 aa11.01□□□□□ -0.65
HMGB1P26-201ENST00000452520 ARSIQ5FYB1 569 aa10.98□□□□□ -0.65
HMGB1P26-201ENST00000452520 BARGINQ6ZT62 677 aa10.97□□□□□ -0.65
HMGB1P26-201ENST00000452520 ZSWIM6Q9HCJ5 1215 aa10.97□□□□□ -0.65
HMGB1P26-201ENST00000452520 NUTM2FA1L443 756 aa10.96□□□□□ -0.65
HMGB1P26-201ENST00000452520 RIMBP2O15034 1052 aa10.96□□□□□ -0.65
HMGB1P26-201ENST00000452520 PRIM1P49642 420 aaKnown RBP10.96□□□□□ -0.65
HMGB1P26-201ENST00000452520 GPR153Q6NV75 609 aa10.96□□□□□ -0.65
HMGB1P26-201ENST00000452520 OTUD5Q96G74 571 aa10.96□□□□□ -0.65
HMGB1P26-201ENST00000452520 PHF14O94880 888 aa10.95□□□□□ -0.66
HMGB1P26-201ENST00000452520 KHSRPQ92945 711 aaKnown RBP eCLIP10.95□□□□□ -0.66
HMGB1P26-201ENST00000452520 SLC24A3Q9HC58 644 aa10.95□□□□□ -0.66
HMGB1P26-201ENST00000452520 ZNF710Q8N1W2 664 aa10.94□□□□□ -0.66
HMGB1P26-201ENST00000452520 EPAS1Q99814 870 aa10.94□□□□□ -0.66
HMGB1P26-201ENST00000452520 PCDHGA10Q9Y5H3 936 aa10.94□□□□□ -0.66
HMGB1P26-201ENST00000452520 NUDT7P0C024 238 aa10.93□□□□□ -0.66
HMGB1P26-201ENST00000452520 LHX8Q68G74 356 aa10.93□□□□□ -0.66
HMGB1P26-201ENST00000452520 SNPHO15079 494 aa10.92□□□□□ -0.66
HMGB1P26-201ENST00000452520 GPR37O15354 613 aa10.92□□□□□ -0.66
HMGB1P26-201ENST00000452520 KRI1Q8N9T8 703 aaKnown RBP10.91□□□□□ -0.66
HMGB1P26-201ENST00000452520 JPH4Q96JJ6 628 aa10.9□□□□□ -0.66
HMGB1P26-201ENST00000452520 FOSBP53539 338 aa10.89□□□□□ -0.67
HMGB1P26-201ENST00000452520 EN1Q05925 392 aaPredicted RBP10.89□□□□□ -0.67
HMGB1P26-201ENST00000452520 TYW1BQ6NUM6 668 aa10.89□□□□□ -0.67
HMGB1P26-201ENST00000452520 RBM33Q96EV2 1170 aaKnown RBP10.89□□□□□ -0.67
HMGB1P26-201ENST00000452520 FCHSD2O94868 740 aa10.88□□□□□ -0.67
HMGB1P26-201ENST00000452520 PTGDRQ13258 359 aa10.87□□□□□ -0.67
HMGB1P26-201ENST00000452520 FBXW7Q969H0 707 aa10.87□□□□□ -0.67
HMGB1P26-201ENST00000452520 MAP3K7O43318 606 aa10.86□□□□□ -0.67
HMGB1P26-201ENST00000452520 ZNF454Q8N9F8 522 aa10.86□□□□□ -0.67
HMGB1P26-201ENST00000452520 AK7Q96M32 723 aa10.86□□□□□ -0.67
HMGB1P26-201ENST00000452520 HOXB1P14653 301 aaPredicted RBP10.85□□□□□ -0.67
HMGB1P26-201ENST00000452520 HIC1Q14526 733 aa10.85□□□□□ -0.67
HMGB1P26-201ENST00000452520 NPDC1Q9NQX5 325 aaPredicted RBP10.85□□□□□ -0.67
HMGB1P26-201ENST00000452520 LHX6Q9UPM6 363 aa10.85□□□□□ -0.67
HMGB1P26-201ENST00000452520 GNPATO15228 680 aa10.84□□□□□ -0.67
HMGB1P26-201ENST00000452520 ZDHHC16Q969W1 377 aa10.84□□□□□ -0.67
HMGB1P26-201ENST00000452520 TSR1Q2NL82 804 aaKnown RBP10.83□□□□□ -0.68
HMGB1P26-201ENST00000452520 CDHR5Q9HBB8 845 aa10.83□□□□□ -0.68
HMGB1P26-201ENST00000452520 MINK1Q8N4C8 1332 aaPredicted RBP10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms