RNA–Protein interactions for RNA: ENST00000452495.1

TRAPPC12-211, Transcript of trafficking protein particle complex 12, humanhuman

TSL 4

Gene TRAPPC12, Length 544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-211ENST00000452495 NEO1Q92859 1461 aa22.83■■□□□ 1.25
TRAPPC12-211ENST00000452495 ARHGAP5Q13017 1502 aa22.82■■□□□ 1.24
TRAPPC12-211ENST00000452495 FANCAO15360 1455 aa22.81■■□□□ 1.24
TRAPPC12-211ENST00000452495 KDM6BO15054 1643 aa22.79■■□□□ 1.24
TRAPPC12-211ENST00000452495 KANK4Q5T7N3 995 aaPredicted RBP22.79■■□□□ 1.24
TRAPPC12-211ENST00000452495 PHLDB1Q86UU1 1377 aa22.78■■□□□ 1.24
TRAPPC12-211ENST00000452495 GPATCH8Q9UKJ3 1502 aaKnown RBP22.78■■□□□ 1.24
TRAPPC12-211ENST00000452495 CCNB3Q8WWL7 1395 aa22.77■■□□□ 1.24
TRAPPC12-211ENST00000452495 ABCC1P33527 1531 aa22.72■■□□□ 1.23
TRAPPC12-211ENST00000452495 SAMD9LQ8IVG5 1584 aa22.72■■□□□ 1.23
TRAPPC12-211ENST00000452495 RICTORQ6R327 1708 aa22.71■■□□□ 1.23
TRAPPC12-211ENST00000452495 AKNAQ7Z591 1439 aa22.71■■□□□ 1.23
TRAPPC12-211ENST00000452495 MYOM3Q5VTT5 1437 aa22.7■■□□□ 1.22
TRAPPC12-211ENST00000452495 ADGRL1O94910 1474 aa22.7■■□□□ 1.22
TRAPPC12-211ENST00000452495 EFCAB2Q5VUJ9 269 aa22.68■■□□□ 1.22
TRAPPC12-211ENST00000452495 PLEKHH2Q8IVE3 1493 aa22.67■■□□□ 1.22
TRAPPC12-211ENST00000452495 FRMPD1Q5SYB0 1578 aa22.67■■□□□ 1.22
TRAPPC12-211ENST00000452495 MIA2Q96PC5 1412 aa22.65■■□□□ 1.22
TRAPPC12-211ENST00000452495 FOXD1Q16676 465 aa22.64■■□□□ 1.21
TRAPPC12-211ENST00000452495 SYCP2Q9BX26 1530 aa22.63■■□□□ 1.21
TRAPPC12-211ENST00000452495 DENND4BO75064 1496 aaPredicted RBP22.63■■□□□ 1.21
TRAPPC12-211ENST00000452495 CAMSAP2Q08AD1 1489 aa22.63■■□□□ 1.21
TRAPPC12-211ENST00000452495 COL17A1Q9UMD9 1497 aaPredicted RBP22.63■■□□□ 1.21
TRAPPC12-211ENST00000452495 CFDP1Q9UEE9 299 aaPredicted RBP22.63■■□□□ 1.21
TRAPPC12-211ENST00000452495 PTPN23Q9H3S7 1636 aa22.63■■□□□ 1.21
TRAPPC12-211ENST00000452495 POGZQ7Z3K3 1410 aa22.62■■□□□ 1.21
TRAPPC12-211ENST00000452495 ZMYM4Q5VZL5 1548 aa22.62■■□□□ 1.21
TRAPPC12-211ENST00000452495 KDM5CP41229 1560 aa22.6■■□□□ 1.21
TRAPPC12-211ENST00000452495 KIAA1107Q9UPP5 1409 aa22.6■■□□□ 1.21
TRAPPC12-211ENST00000452495 ZNF518AQ6AHZ1 1483 aa22.6■■□□□ 1.21
TRAPPC12-211ENST00000452495 FGD6Q6ZV73 1430 aa22.59■■□□□ 1.21
TRAPPC12-211ENST00000452495 SCAPERQ9BY12 1400 aa22.59■■□□□ 1.21
TRAPPC12-211ENST00000452495 ARHGEF5Q12774 1597 aa22.58■■□□□ 1.2
TRAPPC12-211ENST00000452495 ARHGEF12Q9NZN5 1544 aa22.57■■□□□ 1.2
TRAPPC12-211ENST00000452495 TCOF1Q13428 1488 aaKnown RBP22.56■■□□□ 1.2
TRAPPC12-211ENST00000452495 CROCC2H7BZ55 1655 aa22.55■■□□□ 1.2
TRAPPC12-211ENST00000452495 HECW2Q9P2P5 1572 aa22.55■■□□□ 1.2
TRAPPC12-211ENST00000452495 ZNF777Q9ULD5 760 aaPredicted RBP22.54■■□□□ 1.2
TRAPPC12-211ENST00000452495 ARHGEF40Q8TER5 1519 aa22.52■■□□□ 1.2
TRAPPC12-211ENST00000452495 MBD5Q9P267 1494 aa22.52■■□□□ 1.2
TRAPPC12-211ENST00000452495 INO80Q9ULG1 1556 aaPredicted RBP22.51■■□□□ 1.19
TRAPPC12-211ENST00000452495 CCDC141Q6ZP82 1450 aa22.51■■□□□ 1.19
TRAPPC12-211ENST00000452495 DNMT1P26358 1616 aaKnown RBP22.5■■□□□ 1.19
TRAPPC12-211ENST00000452495 TRAPPC8Q9Y2L5 1435 aa22.5■■□□□ 1.19
TRAPPC12-211ENST00000452495 MAGI2Q86UL8 1455 aa22.5■■□□□ 1.19
TRAPPC12-211ENST00000452495 PPARGC1BQ86YN6 1023 aaKnown RBP22.49■■□□□ 1.19
TRAPPC12-211ENST00000452495 ZFYVE16Q7Z3T8 1539 aa22.48■■□□□ 1.19
TRAPPC12-211ENST00000452495 ZNF644Q9H582 1327 aaPredicted RBP22.48■■□□□ 1.19
TRAPPC12-211ENST00000452495 KIDINS220Q9ULH0 1771 aa22.48■■□□□ 1.19
TRAPPC12-211ENST00000452495 RAPGEF3O95398 923 aa22.47■■□□□ 1.19
TRAPPC12-211ENST00000452495 MLH3Q9UHC1 1453 aa22.47■■□□□ 1.19
TRAPPC12-211ENST00000452495 MAST1Q9Y2H9 1570 aa22.46■■□□□ 1.19
TRAPPC12-211ENST00000452495 ATP7AQ04656 1500 aa22.45■■□□□ 1.18
TRAPPC12-211ENST00000452495 ABCA6Q8N139 1617 aa22.45■■□□□ 1.18
TRAPPC12-211ENST00000452495 RRBP1Q9P2E9 1410 aaKnown RBP22.44■■□□□ 1.18
TRAPPC12-211ENST00000452495 SHANK2Q9UPX8 1470 aa22.43■■□□□ 1.18
TRAPPC12-211ENST00000452495 RSPH4AQ5TD94 716 aa22.43■■□□□ 1.18
TRAPPC12-211ENST00000452495 DIP2CQ9Y2E4 1556 aa22.42■■□□□ 1.18
TRAPPC12-211ENST00000452495 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.42■■□□□ 1.18
TRAPPC12-211ENST00000452495 HNRNPMP52272 730 aaKnown RBP eCLIP22.42■■□□□ 1.18
TRAPPC12-211ENST00000452495 ADGBQ8N7X0 1667 aa22.42■■□□□ 1.18
TRAPPC12-211ENST00000452495 AFAP1Q8N556 730 aa22.4■■□□□ 1.18
TRAPPC12-211ENST00000452495 PLXNC1O60486 1568 aa22.4■■□□□ 1.18
TRAPPC12-211ENST00000452495 REREQ9P2R6 1566 aa22.4■■□□□ 1.18
TRAPPC12-211ENST00000452495 RTEL1-TNFRSF6BF6WH68 1400 aa22.39■■□□□ 1.17
TRAPPC12-211ENST00000452495 DAPK1P53355 1430 aa22.39■■□□□ 1.17
TRAPPC12-211ENST00000452495 YEATS2Q9ULM3 1422 aa22.37■■□□□ 1.17
TRAPPC12-211ENST00000452495 SPAG9O60271 1321 aaKnown RBP22.36■■□□□ 1.17
TRAPPC12-211ENST00000452495 ABCC5O15440 1437 aa22.36■■□□□ 1.17
TRAPPC12-211ENST00000452495 C9orf84Q5VXU9 1444 aa22.35■■□□□ 1.17
TRAPPC12-211ENST00000452495 FAM50AQ14320 339 aaKnown RBP22.33■■□□□ 1.17
TRAPPC12-211ENST00000452495 ATP10AO60312 1499 aa22.32■■□□□ 1.16
TRAPPC12-211ENST00000452495 SIGLEC1Q9BZZ2 1709 aa22.31■■□□□ 1.16
TRAPPC12-211ENST00000452495 TSPY4P0CV99 314 aa22.3■■□□□ 1.16
TRAPPC12-211ENST00000452495 TSPY10P0CW01 314 aa22.3■■□□□ 1.16
TRAPPC12-211ENST00000452495 ADGRL2O95490 1459 aa22.29■■□□□ 1.16
TRAPPC12-211ENST00000452495 MYT1LQ9UL68 1186 aa22.29■■□□□ 1.16
TRAPPC12-211ENST00000452495 BCORL1Q5H9F3 1711 aa22.28■■□□□ 1.16
TRAPPC12-211ENST00000452495 AGLP35573 1532 aa22.26■■□□□ 1.15
TRAPPC12-211ENST00000452495 EIF2AK4Q9P2K8 1649 aaKnown RBP22.26■■□□□ 1.15
TRAPPC12-211ENST00000452495 A2MP01023 1474 aa22.26■■□□□ 1.15
TRAPPC12-211ENST00000452495 DUOX2Q9NRD8 1548 aa22.23■■□□□ 1.15
TRAPPC12-211ENST00000452495 ANKRD30AQ9BXX3 1397 aa22.22■■□□□ 1.15
TRAPPC12-211ENST00000452495 PTPRKQ15262 1439 aa22.21■■□□□ 1.15
TRAPPC12-211ENST00000452495 GCC2Q8IWJ2 1684 aa22.2■■□□□ 1.15
TRAPPC12-211ENST00000452495 ROCK1Q13464 1354 aa22.2■■□□□ 1.14
TRAPPC12-211ENST00000452495 KIF15Q9NS87 1388 aa22.19■■□□□ 1.14
TRAPPC12-211ENST00000452495 NCOA1Q15788 1441 aa22.19■■□□□ 1.14
TRAPPC12-211ENST00000452495 RNF17Q9BXT8 1623 aaKnown RBP22.17■■□□□ 1.14
TRAPPC12-211ENST00000452495 ERBINQ96RT1 1412 aa22.17■■□□□ 1.14
TRAPPC12-211ENST00000452495 DHX29Q7Z478 1369 aaKnown RBP22.17■■□□□ 1.14
TRAPPC12-211ENST00000452495 FER1L4A9Z1Z3 1794 aa22.17■■□□□ 1.14
TRAPPC12-211ENST00000452495 ADAMTSL3P82987 1691 aa22.17■■□□□ 1.14
TRAPPC12-211ENST00000452495 DEPDC5O75140 1603 aa22.13■■□□□ 1.13
TRAPPC12-211ENST00000452495 CHIC2Q9UKJ5 165 aa22.12■■□□□ 1.13
TRAPPC12-211ENST00000452495 FAM135AQ9P2D6 1515 aa22.11■■□□□ 1.13
TRAPPC12-211ENST00000452495 MADDQ8WXG6 1647 aa22.11■■□□□ 1.13
TRAPPC12-211ENST00000452495 ITGAEP38570 1179 aa22.11■■□□□ 1.13
TRAPPC12-211ENST00000452495 ARID4BQ4LE39 1312 aaPredicted RBP22.1■■□□□ 1.13
TRAPPC12-211ENST00000452495 ZC3H13Q5T200 1668 aaKnown RBP22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms