RNA–Protein interactions for RNA: ENST00000451653.5

SEC22C-211, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 1 (best)

Gene SEC22C, Length 5,955 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-211ENST00000451653 CHAF1AQ13111 956 aaPredicted RBP10.65□□□□□ -0.7
SEC22C-211ENST00000451653 NUDCQ9Y266 331 aa10.65□□□□□ -0.7
SEC22C-211ENST00000451653 SETD5Q9C0A6 1442 aa10.65□□□□□ -0.7
SEC22C-211ENST00000451653 GNL2Q13823 731 aaKnown RBP10.65□□□□□ -0.7
SEC22C-211ENST00000451653 NEUROD2Q15784 382 aa10.64□□□□□ -0.71
SEC22C-211ENST00000451653 CDCA8Q53HL2 280 aa10.63□□□□□ -0.71
SEC22C-211ENST00000451653 DCAF11Q8TEB1 546 aa10.63□□□□□ -0.71
SEC22C-211ENST00000451653 KNSTRNQ9Y448 316 aa10.63□□□□□ -0.71
SEC22C-211ENST00000451653 CHMP4BQ9H444 224 aaKnown RBP10.62□□□□□ -0.71
SEC22C-211ENST00000451653 CC2D1BQ5T0F9 858 aaKnown RBP10.62□□□□□ -0.71
SEC22C-211ENST00000451653 RAB3GAP2Q9H2M9 1393 aa10.62□□□□□ -0.71
SEC22C-211ENST00000451653 SUPT16HQ9Y5B9 1047 aaKnown RBP10.61□□□□□ -0.71
SEC22C-211ENST00000451653 HSP90AB1P08238 724 aaKnown RBP10.61□□□□□ -0.71
SEC22C-211ENST00000451653 PDE4CQ08493 712 aa10.61□□□□□ -0.71
SEC22C-211ENST00000451653 G3V3G9 751 aa10.6□□□□□ -0.71
SEC22C-211ENST00000451653 DCAF8Q5TAQ9 597 aa10.6□□□□□ -0.71
SEC22C-211ENST00000451653 CCDC9Q9Y3X0 531 aaKnown RBP10.59□□□□□ -0.71
SEC22C-211ENST00000451653 DRC7Q8IY82 874 aa10.59□□□□□ -0.71
SEC22C-211ENST00000451653 NAP1L5Q96NT1 182 aaPredicted RBP10.59□□□□□ -0.71
SEC22C-211ENST00000451653 PKD2Q13563 968 aa10.59□□□□□ -0.71
SEC22C-211ENST00000451653 MLECQ14165 292 aa10.58□□□□□ -0.72
SEC22C-211ENST00000451653 FANCD2Q9BXW9 1451 aa10.58□□□□□ -0.72
SEC22C-211ENST00000451653 FMN1Q68DA7 1419 aa10.58□□□□□ -0.72
SEC22C-211ENST00000451653 SOX12O15370 315 aa10.58□□□□□ -0.72
SEC22C-211ENST00000451653 ZNF330Q9Y3S2 320 aaPredicted RBP10.58□□□□□ -0.72
SEC22C-211ENST00000451653 HSPA5P11021 654 aaKnown RBP10.58□□□□□ -0.72
SEC22C-211ENST00000451653 FRAT1Q92837 279 aaPredicted RBP10.57□□□□□ -0.72
SEC22C-211ENST00000451653 CARMIL2Q6F5E8 1435 aa10.57□□□□□ -0.72
SEC22C-211ENST00000451653 U2SURPO15042 1029 aaKnown RBP10.57□□□□□ -0.72
SEC22C-211ENST00000451653 MCCP23508 829 aa10.56□□□□□ -0.72
SEC22C-211ENST00000451653 A0A0U1RQG5 324 aaPredicted RBP10.55□□□□□ -0.72
SEC22C-211ENST00000451653 ERICH6BQ5W0A0 696 aa10.55□□□□□ -0.72
SEC22C-211ENST00000451653 HDGFP51858 240 aaKnown RBP10.55□□□□□ -0.72
SEC22C-211ENST00000451653 MPHOSPH9Q99550 1183 aa10.55□□□□□ -0.72
SEC22C-211ENST00000451653 HNRNPMP52272 730 aaKnown RBP eCLIP10.54□□□□□ -0.72
SEC22C-211ENST00000451653 SAFB2Q14151 953 aaKnown RBP eCLIP10.54□□□□□ -0.72
SEC22C-211ENST00000451653 CSB-PGBD3P0DP91 1061 aa10.54□□□□□ -0.72
SEC22C-211ENST00000451653 GGT6Q6P531 493 aa10.54□□□□□ -0.72
SEC22C-211ENST00000451653 MS4A1P11836 297 aa10.54□□□□□ -0.72
SEC22C-211ENST00000451653 AMER1Q5JTC6 1135 aaPredicted RBP10.54□□□□□ -0.72
SEC22C-211ENST00000451653 CEP89Q96ST8 783 aa10.52□□□□□ -0.73
SEC22C-211ENST00000451653 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.52□□□□□ -0.73
SEC22C-211ENST00000451653 RGS3P49796 1198 aa10.52□□□□□ -0.73
SEC22C-211ENST00000451653 RTF1Q92541 710 aaKnown RBP10.52□□□□□ -0.73
SEC22C-211ENST00000451653 RAD54L2Q9Y4B4 1467 aa10.52□□□□□ -0.73
SEC22C-211ENST00000451653 KANK1Q14678 1352 aa10.51□□□□□ -0.73
SEC22C-211ENST00000451653 NUP155O75694 1391 aa10.51□□□□□ -0.73
SEC22C-211ENST00000451653 FGD5Q6ZNL6 1462 aa10.5□□□□□ -0.73
SEC22C-211ENST00000451653 VPS53Q5VIR6 699 aa10.5□□□□□ -0.73
SEC22C-211ENST00000451653 CNKSR2Q8WXI2 1034 aa10.5□□□□□ -0.73
SEC22C-211ENST00000451653 TMF1P82094 1093 aa10.5□□□□□ -0.73
SEC22C-211ENST00000451653 JPH4Q96JJ6 628 aa10.49□□□□□ -0.73
SEC22C-211ENST00000451653 GORABQ5T7V8 394 aa10.49□□□□□ -0.73
SEC22C-211ENST00000451653 KIAA1211Q6ZU35 1233 aa10.49□□□□□ -0.73
SEC22C-211ENST00000451653 RASSF8Q8NHQ8 419 aa10.49□□□□□ -0.73
SEC22C-211ENST00000451653 ANO8Q9HCE9 1232 aaPredicted RBP10.49□□□□□ -0.73
SEC22C-211ENST00000451653 HSCBQ8IWL3 235 aa10.48□□□□□ -0.73
SEC22C-211ENST00000451653 STK26Q9P289 416 aa10.48□□□□□ -0.73
SEC22C-211ENST00000451653 PAK3O75914 559 aaPredicted RBP10.48□□□□□ -0.73
SEC22C-211ENST00000451653 FBXO3Q9UK99 471 aa10.48□□□□□ -0.73
SEC22C-211ENST00000451653 TAF7LQ5H9L4 462 aa10.47□□□□□ -0.73
SEC22C-211ENST00000451653 MSNP26038 577 aaKnown RBP10.47□□□□□ -0.73
SEC22C-211ENST00000451653 TIMELESSQ9UNS1 1208 aa10.47□□□□□ -0.73
SEC22C-211ENST00000451653 ANKRD30AQ9BXX3 1397 aa10.47□□□□□ -0.73
SEC22C-211ENST00000451653 MARCH6O60337 910 aa10.46□□□□□ -0.73
SEC22C-211ENST00000451653 L3MBTL2Q969R5 705 aa10.46□□□□□ -0.73
SEC22C-211ENST00000451653 SRPK2P78362 688 aaKnown RBP10.46□□□□□ -0.74
SEC22C-211ENST00000451653 CCDC34Q96HJ3 373 aa10.46□□□□□ -0.74
SEC22C-211ENST00000451653 ROCK2O75116 1388 aaKnown RBP10.46□□□□□ -0.74
SEC22C-211ENST00000451653 IGF1RP08069 1367 aa10.46□□□□□ -0.74
SEC22C-211ENST00000451653 NUTM2DQ5VT03 806 aaPredicted RBP10.45□□□□□ -0.74
SEC22C-211ENST00000451653 EFCAB2Q5VUJ9 269 aa10.45□□□□□ -0.74
SEC22C-211ENST00000451653 WWC1Q8IX03 1113 aa10.45□□□□□ -0.74
SEC22C-211ENST00000451653 CHMP3Q9Y3E7 222 aa10.45□□□□□ -0.74
SEC22C-211ENST00000451653 TPM4P67936 248 aa10.45□□□□□ -0.74
SEC22C-211ENST00000451653 HTATSF1O43719 755 aaKnown RBP10.45□□□□□ -0.74
SEC22C-211ENST00000451653 HSP90B1P14625 803 aaKnown RBP10.45□□□□□ -0.74
SEC22C-211ENST00000451653 B4GALNT3Q6L9W6 998 aa10.45□□□□□ -0.74
SEC22C-211ENST00000451653 CCDC18Q5T9S5 1454 aa10.44□□□□□ -0.74
SEC22C-211ENST00000451653 CFAP44Q96MT7 982 aa10.44□□□□□ -0.74
SEC22C-211ENST00000451653 APBB1O00213 710 aa10.44□□□□□ -0.74
SEC22C-211ENST00000451653 KIF3BO15066 747 aa10.44□□□□□ -0.74
SEC22C-211ENST00000451653 FRAT2O75474 233 aaPredicted RBP10.44□□□□□ -0.74
SEC22C-211ENST00000451653 CREBRFQ8IUR6 639 aa10.44□□□□□ -0.74
SEC22C-211ENST00000451653 DHX57Q6P158 1386 aaKnown RBP10.44□□□□□ -0.74
SEC22C-211ENST00000451653 GTF2E1P29083 439 aaPredicted RBP10.43□□□□□ -0.74
SEC22C-211ENST00000451653 GAPVD1Q14C86 1478 aa10.43□□□□□ -0.74
SEC22C-211ENST00000451653 GOLGA6L1Q8N7Z2 621 aa10.42□□□□□ -0.74
SEC22C-211ENST00000451653 MSH5O43196 834 aa10.42□□□□□ -0.74
SEC22C-211ENST00000451653 DCAF8L1A6NGE4 600 aa10.41□□□□□ -0.74
SEC22C-211ENST00000451653 MORC1Q86VD1 984 aa10.41□□□□□ -0.74
SEC22C-211ENST00000451653 CTDP1Q9Y5B0 961 aaPredicted RBP10.41□□□□□ -0.74
SEC22C-211ENST00000451653 CCER2I3L3R5 266 aa10.41□□□□□ -0.74
SEC22C-211ENST00000451653 AQRO60306 1485 aaKnown RBP eCLIP10.41□□□□□ -0.741e-6■■■■■ 30.6
SEC22C-211ENST00000451653 PPP4R2Q9NY27 417 aa10.4□□□□□ -0.74
SEC22C-211ENST00000451653 TCEAL9Q9UHQ7 104 aa10.4□□□□□ -0.74
SEC22C-211ENST00000451653 CWC22Q9HCG8 908 aaKnown RBP10.4□□□□□ -0.74
SEC22C-211ENST00000451653 SYNJ1O43426 1573 aa10.4□□□□□ -0.74
SEC22C-211ENST00000451653 SPRYD3Q8NCJ5 442 aa10.4□□□□□ -0.74
SEC22C-211ENST00000451653 TOMM22Q9NS69 142 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms