RNA–Protein interactions for RNA: ENST00000449489.5

RBM39-218, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 432 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-218ENST00000449489 CTTNBP2Q8WZ74 1663 aa12.8□□□□□ -0.36
RBM39-218ENST00000449489 ATP10BO94823 1461 aa12.79□□□□□ -0.36
RBM39-218ENST00000449489 SAMD1Q6SPF0 538 aaPredicted RBP12.79□□□□□ -0.36
RBM39-218ENST00000449489 FAM9AQ8IZU1 332 aaPredicted RBP12.79□□□□□ -0.36
RBM39-218ENST00000449489 FRMPD1Q5SYB0 1578 aa12.77□□□□□ -0.36
RBM39-218ENST00000449489 RIMS1Q86UR5 1692 aaKnown RBP12.77□□□□□ -0.36
RBM39-218ENST00000449489 HSPA2P54652 639 aa12.77□□□□□ -0.37
RBM39-218ENST00000449489 POGZQ7Z3K3 1410 aa12.77□□□□□ -0.37
RBM39-218ENST00000449489 U3KPZ7 1027 aaPredicted RBP12.76□□□□□ -0.37
RBM39-218ENST00000449489 ARHGEF40Q8TER5 1519 aa12.76□□□□□ -0.37
RBM39-218ENST00000449489 FHOD3Q2V2M9 1422 aa12.74□□□□□ -0.37
RBM39-218ENST00000449489 FANCAO15360 1455 aa12.72□□□□□ -0.37
RBM39-218ENST00000449489 DENND4BO75064 1496 aaPredicted RBP12.72□□□□□ -0.37
RBM39-218ENST00000449489 AKNAQ7Z591 1439 aa12.71□□□□□ -0.37
RBM39-218ENST00000449489 RICTORQ6R327 1708 aa12.71□□□□□ -0.37
RBM39-218ENST00000449489 MAGI2Q86UL8 1455 aa12.71□□□□□ -0.38
RBM39-218ENST00000449489 YEATS2Q9ULM3 1422 aa12.71□□□□□ -0.38
RBM39-218ENST00000449489 SETD1BQ9UPS6 1966 aaKnown RBP12.7□□□□□ -0.38
RBM39-218ENST00000449489 APLP2Q06481 763 aa12.7□□□□□ -0.38
RBM39-218ENST00000449489 TTC37Q6PGP7 1564 aa12.69□□□□□ -0.38
RBM39-218ENST00000449489 ZMYM4Q5VZL5 1548 aa12.69□□□□□ -0.38
RBM39-218ENST00000449489 PRXQ9BXM0 1461 aa12.68□□□□□ -0.38
RBM39-218ENST00000449489 CAPN15O75808 1086 aa12.68□□□□□ -0.38
RBM39-218ENST00000449489 SPATA31D1Q6ZQQ2 1576 aa12.68□□□□□ -0.38
RBM39-218ENST00000449489 EFCAB5A4FU69 1503 aa12.67□□□□□ -0.38
RBM39-218ENST00000449489 CFAP74Q9C0B2 1584 aa12.66□□□□□ -0.38
RBM39-218ENST00000449489 PREX1Q8TCU6 1659 aa12.66□□□□□ -0.38
RBM39-218ENST00000449489 ARID3CA6NKF2 412 aa12.65□□□□□ -0.38
RBM39-218ENST00000449489 ZFYVE16Q7Z3T8 1539 aa12.65□□□□□ -0.38
RBM39-218ENST00000449489 FER1L4A9Z1Z3 1794 aa12.65□□□□□ -0.38
RBM39-218ENST00000449489 STRCQ7RTU9 1775 aa12.65□□□□□ -0.38
RBM39-218ENST00000449489 RAPGEF6Q8TEU7 1601 aa12.65□□□□□ -0.38
RBM39-218ENST00000449489 IQSEC2Q5JU85 1478 aa12.64□□□□□ -0.39
RBM39-218ENST00000449489 SIGLEC1Q9BZZ2 1709 aa12.63□□□□□ -0.39
RBM39-218ENST00000449489 PTPRTO14522 1441 aa12.62□□□□□ -0.39
RBM39-218ENST00000449489 ARHGEF12Q9NZN5 1544 aa12.62□□□□□ -0.39
RBM39-218ENST00000449489 SAMD9Q5K651 1589 aa12.62□□□□□ -0.39
RBM39-218ENST00000449489 PLEKHD1A6NEE1 506 aa12.61□□□□□ -0.39
RBM39-218ENST00000449489 SPINK5Q9NQ38 1064 aaPredicted RBP12.61□□□□□ -0.39
RBM39-218ENST00000449489 NUP153P49790 1475 aaKnown RBP12.6□□□□□ -0.39
RBM39-218ENST00000449489 P3H3Q8IVL6 736 aa12.6□□□□□ -0.39
RBM39-218ENST00000449489 ATP10AO60312 1499 aa12.59□□□□□ -0.39
RBM39-218ENST00000449489 HECW1Q76N89 1606 aa12.59□□□□□ -0.39
RBM39-218ENST00000449489 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.58□□□□□ -0.4
RBM39-218ENST00000449489 MLECQ14165 292 aa12.58□□□□□ -0.4
RBM39-218ENST00000449489 UHRF1BP1Q6BDS2 1440 aa12.58□□□□□ -0.4
RBM39-218ENST00000449489 LTBP4Q8N2S1 1624 aa12.57□□□□□ -0.4
RBM39-218ENST00000449489 C9orf84Q5VXU9 1444 aa12.56□□□□□ -0.4
RBM39-218ENST00000449489 DSG3P32926 999 aa12.56□□□□□ -0.4
RBM39-218ENST00000449489 SCAPERQ9BY12 1400 aa12.54□□□□□ -0.4
RBM39-218ENST00000449489 CEBPAP49715 358 aaPredicted RBP12.54□□□□□ -0.4
RBM39-218ENST00000449489 PLCH2O75038 1416 aa12.54□□□□□ -0.4
RBM39-218ENST00000449489 REREQ9P2R6 1566 aa12.49□□□□□ -0.41
RBM39-218ENST00000449489 NCOA1Q15788 1441 aa12.49□□□□□ -0.41
RBM39-218ENST00000449489 TRAPPC8Q9Y2L5 1435 aa12.49□□□□□ -0.41
RBM39-218ENST00000449489 EFCAB2Q5VUJ9 269 aa12.49□□□□□ -0.41
RBM39-218ENST00000449489 ZNF518AQ6AHZ1 1483 aa12.47□□□□□ -0.41
RBM39-218ENST00000449489 ATF5Q9Y2D1 282 aaPredicted RBP12.47□□□□□ -0.41
RBM39-218ENST00000449489 C3P01024 1663 aa12.46□□□□□ -0.41
RBM39-218ENST00000449489 KDM5CP41229 1560 aa12.46□□□□□ -0.42
RBM39-218ENST00000449489 AGLP35573 1532 aa12.46□□□□□ -0.42
RBM39-218ENST00000449489 CNTLNQ9NXG0 1405 aa12.44□□□□□ -0.42
RBM39-218ENST00000449489 MLH3Q9UHC1 1453 aa12.43□□□□□ -0.42
RBM39-218ENST00000449489 MYO5CQ9NQX4 1742 aa12.42□□□□□ -0.42
RBM39-218ENST00000449489 UBAP1LF5GYI3 381 aa12.42□□□□□ -0.42
RBM39-218ENST00000449489 ZNF219Q9P2Y4 722 aaPredicted RBP12.42□□□□□ -0.42
RBM39-218ENST00000449489 NPATQ14207 1427 aa12.42□□□□□ -0.42
RBM39-218ENST00000449489 DIP2CQ9Y2E4 1556 aa12.42□□□□□ -0.42
RBM39-218ENST00000449489 AFAP1Q8N556 730 aa12.41□□□□□ -0.42
RBM39-218ENST00000449489 ESF1Q9H501 851 aaKnown RBP12.41□□□□□ -0.42
RBM39-218ENST00000449489 PKD2Q13563 968 aa12.39□□□□□ -0.43
RBM39-218ENST00000449489 CDK11AQ9UQ88 783 aaPredicted RBP12.39□□□□□ -0.43
RBM39-218ENST00000449489 CAMSAP1Q5T5Y3 1602 aa12.39□□□□□ -0.43
RBM39-218ENST00000449489 CDK13Q14004 1512 aaKnown RBP12.38□□□□□ -0.43
RBM39-218ENST00000449489 PLA2R1Q13018 1463 aa12.38□□□□□ -0.43
RBM39-218ENST00000449489 ZNF335Q9H4Z2 1342 aaPredicted RBP12.37□□□□□ -0.43
RBM39-218ENST00000449489 MROH2AA6NES4 1674 aa12.37□□□□□ -0.43
RBM39-218ENST00000449489 ABCA6Q8N139 1617 aa12.37□□□□□ -0.43
RBM39-218ENST00000449489 MED1Q15648 1581 aaPredicted RBP12.35□□□□□ -0.43
RBM39-218ENST00000449489 TCOF1Q13428 1488 aaKnown RBP12.35□□□□□ -0.43
RBM39-218ENST00000449489 EEA1Q15075 1411 aa12.35□□□□□ -0.43
RBM39-218ENST00000449489 ARHGAP5Q13017 1502 aa12.34□□□□□ -0.43
RBM39-218ENST00000449489 MYT1LQ9UL68 1186 aa12.34□□□□□ -0.43
RBM39-218ENST00000449489 NCKAP5LQ9HCH0 1330 aa12.34□□□□□ -0.43
RBM39-218ENST00000449489 ZMYM3Q14202 1370 aa12.33□□□□□ -0.44
RBM39-218ENST00000449489 ABCB7O75027 752 aa12.33□□□□□ -0.44
RBM39-218ENST00000449489 FKBP8Q14318 412 aa12.33□□□□□ -0.44
RBM39-218ENST00000449489 TROQ12816 1431 aaPredicted RBP12.33□□□□□ -0.44
RBM39-218ENST00000449489 KIF14Q15058 1648 aa12.33□□□□□ -0.44
RBM39-218ENST00000449489 ZNF142P52746 1687 aaPredicted RBP12.32□□□□□ -0.44
RBM39-218ENST00000449489 FMN1Q68DA7 1419 aa12.32□□□□□ -0.44
RBM39-218ENST00000449489 TOM1O60784 492 aa12.32□□□□□ -0.44
RBM39-218ENST00000449489 HSPA1LP34931 641 aa12.32□□□□□ -0.44
RBM39-218ENST00000449489 RANGAP1P46060 587 aaPredicted RBP12.32□□□□□ -0.44
RBM39-218ENST00000449489 CDC42BPBQ9Y5S2 1711 aa12.31□□□□□ -0.44
RBM39-218ENST00000449489 KIDINS220Q9ULH0 1771 aa12.3□□□□□ -0.44
RBM39-218ENST00000449489 CLIP1P30622 1438 aa12.3□□□□□ -0.44
RBM39-218ENST00000449489 ABCC1P33527 1531 aa12.29□□□□□ -0.44
RBM39-218ENST00000449489 CPS1P31327 1500 aa12.28□□□□□ -0.44
RBM39-218ENST00000449489 CEP170BQ9Y4F5 1589 aaPredicted RBP12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms