RNA–Protein interactions for RNA: ENST00000448789.2

RAB5B-202, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB5B, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-202ENST00000448789 NPM1P06748 294 aaKnown RBP eCLIP22.63■■□□□ 1.21
RAB5B-202ENST00000448789 ZNF777Q9ULD5 760 aaPredicted RBP22.62■■□□□ 1.21
RAB5B-202ENST00000448789 DNMT1P26358 1616 aaKnown RBP22.61■■□□□ 1.21
RAB5B-202ENST00000448789 MYO5CQ9NQX4 1742 aa22.61■■□□□ 1.21
RAB5B-202ENST00000448789 ABCC5O15440 1437 aa22.6■■□□□ 1.21
RAB5B-202ENST00000448789 DAPK1P53355 1430 aa22.6■■□□□ 1.21
RAB5B-202ENST00000448789 SAMD9LQ8IVG5 1584 aa22.59■■□□□ 1.21
RAB5B-202ENST00000448789 ARHGAP5Q13017 1502 aa22.58■■□□□ 1.21
RAB5B-202ENST00000448789 HRCP23327 699 aa22.57■■□□□ 1.2
RAB5B-202ENST00000448789 ABCA9Q8IUA7 1624 aa22.57■■□□□ 1.2
RAB5B-202ENST00000448789 PLCH2O75038 1416 aa22.56■■□□□ 1.2
RAB5B-202ENST00000448789 SETD5Q9C0A6 1442 aa22.55■■□□□ 1.2
RAB5B-202ENST00000448789 RAB3GAP2Q9H2M9 1393 aa22.55■■□□□ 1.2
RAB5B-202ENST00000448789 MAPKBP1O60336 1514 aa22.54■■□□□ 1.2
RAB5B-202ENST00000448789 CHIC2Q9UKJ5 165 aa22.54■■□□□ 1.2
RAB5B-202ENST00000448789 HFM1A2PYH4 1435 aa22.52■■□□□ 1.2
RAB5B-202ENST00000448789 CCER1Q8TC90 406 aaPredicted RBP22.52■■□□□ 1.19
RAB5B-202ENST00000448789 MBD5Q9P267 1494 aa22.51■■□□□ 1.19
RAB5B-202ENST00000448789 CROCC2H7BZ55 1655 aa22.51■■□□□ 1.19
RAB5B-202ENST00000448789 NAIPQ13075 1403 aa22.51■■□□□ 1.19
RAB5B-202ENST00000448789 AKNAQ7Z591 1439 aa22.49■■□□□ 1.19
RAB5B-202ENST00000448789 ARAP3Q8WWN8 1544 aa22.49■■□□□ 1.19
RAB5B-202ENST00000448789 SYCP2Q9BX26 1530 aa22.49■■□□□ 1.19
RAB5B-202ENST00000448789 ARHGEF5Q12774 1597 aa22.48■■□□□ 1.19
RAB5B-202ENST00000448789 HNRNPMP52272 730 aaKnown RBP eCLIP22.48■■□□□ 1.19
RAB5B-202ENST00000448789 RRP7BPQ9NSQ0 103 aa22.47■■□□□ 1.19
RAB5B-202ENST00000448789 ARHGEF12Q9NZN5 1544 aa22.46■■□□□ 1.19
RAB5B-202ENST00000448789 GCC2Q8IWJ2 1684 aa22.46■■□□□ 1.19
RAB5B-202ENST00000448789 EFCAB2Q5VUJ9 269 aa22.45■■□□□ 1.18
RAB5B-202ENST00000448789 ABCC1P33527 1531 aa22.45■■□□□ 1.18
RAB5B-202ENST00000448789 ROCK1Q13464 1354 aa22.44■■□□□ 1.18
RAB5B-202ENST00000448789 DHX57Q6P158 1386 aaKnown RBP22.44■■□□□ 1.18
RAB5B-202ENST00000448789 CCDC141Q6ZP82 1450 aa22.43■■□□□ 1.18
RAB5B-202ENST00000448789 PLEKHH2Q8IVE3 1493 aa22.43■■□□□ 1.18
RAB5B-202ENST00000448789 SHANK2Q9UPX8 1470 aa22.43■■□□□ 1.18
RAB5B-202ENST00000448789 KIAA1107Q9UPP5 1409 aa22.43■■□□□ 1.18
RAB5B-202ENST00000448789 ADGRL2O95490 1459 aa22.43■■□□□ 1.18
RAB5B-202ENST00000448789 KDM6BO15054 1643 aa22.42■■□□□ 1.18
RAB5B-202ENST00000448789 C9orf84Q5VXU9 1444 aa22.42■■□□□ 1.18
RAB5B-202ENST00000448789 FANCAO15360 1455 aa22.42■■□□□ 1.18
RAB5B-202ENST00000448789 ADGBQ8N7X0 1667 aa22.41■■□□□ 1.18
RAB5B-202ENST00000448789 CD109Q6YHK3 1445 aa22.4■■□□□ 1.18
RAB5B-202ENST00000448789 NCOA1Q15788 1441 aa22.39■■□□□ 1.17
RAB5B-202ENST00000448789 TRAPPC8Q9Y2L5 1435 aa22.37■■□□□ 1.17
RAB5B-202ENST00000448789 DIP2BQ9P265 1576 aa22.36■■□□□ 1.17
RAB5B-202ENST00000448789 GLI2P10070 1586 aa22.36■■□□□ 1.17
RAB5B-202ENST00000448789 MAP3K4Q9Y6R4 1608 aa22.34■■□□□ 1.17
RAB5B-202ENST00000448789 MAST1Q9Y2H9 1570 aa22.34■■□□□ 1.17
RAB5B-202ENST00000448789 ANKRD30AQ9BXX3 1397 aa22.34■■□□□ 1.17
RAB5B-202ENST00000448789 ADGRL1O94910 1474 aa22.32■■□□□ 1.16
RAB5B-202ENST00000448789 TSPY4P0CV99 314 aa22.32■■□□□ 1.16
RAB5B-202ENST00000448789 TSPY10P0CW01 314 aa22.32■■□□□ 1.16
RAB5B-202ENST00000448789 RSPH4AQ5TD94 716 aa22.32■■□□□ 1.16
RAB5B-202ENST00000448789 ZEB1P37275 1124 aaPredicted RBP22.3■■□□□ 1.16
RAB5B-202ENST00000448789 SCAPERQ9BY12 1400 aa22.29■■□□□ 1.16
RAB5B-202ENST00000448789 CFAP74Q9C0B2 1584 aa22.29■■□□□ 1.16
RAB5B-202ENST00000448789 FAM69CQ0P6D2 419 aa22.28■■□□□ 1.16
RAB5B-202ENST00000448789 KIF15Q9NS87 1388 aa22.28■■□□□ 1.16
RAB5B-202ENST00000448789 AFAP1Q8N556 730 aa22.26■■□□□ 1.15
RAB5B-202ENST00000448789 ANKRD50Q9ULJ7 1429 aa22.25■■□□□ 1.15
RAB5B-202ENST00000448789 PLXNC1O60486 1568 aa22.25■■□□□ 1.15
RAB5B-202ENST00000448789 NEO1Q92859 1461 aa22.24■■□□□ 1.15
RAB5B-202ENST00000448789 ZFYVE16Q7Z3T8 1539 aa22.24■■□□□ 1.15
RAB5B-202ENST00000448789 INO80Q9ULG1 1556 aaPredicted RBP22.21■■□□□ 1.15
RAB5B-202ENST00000448789 CLSPNQ9HAW4 1339 aa22.21■■□□□ 1.15
RAB5B-202ENST00000448789 SPAG9O60271 1321 aaKnown RBP22.2■■□□□ 1.15
RAB5B-202ENST00000448789 PPRC1Q5VV67 1664 aaKnown RBP22.2■■□□□ 1.15
RAB5B-202ENST00000448789 KIF13AQ9H1H9 1805 aa22.2■■□□□ 1.14
RAB5B-202ENST00000448789 DENND4BO75064 1496 aaPredicted RBP22.2■■□□□ 1.14
RAB5B-202ENST00000448789 POGZQ7Z3K3 1410 aa22.19■■□□□ 1.14
RAB5B-202ENST00000448789 TRIM52Q96A61 297 aa22.19■■□□□ 1.14
RAB5B-202ENST00000448789 RTEL1-TNFRSF6BF6WH68 1400 aa22.19■■□□□ 1.14
RAB5B-202ENST00000448789 ATP7AQ04656 1500 aa22.18■■□□□ 1.14
RAB5B-202ENST00000448789 ZNF518AQ6AHZ1 1483 aa22.17■■□□□ 1.14
RAB5B-202ENST00000448789 KDM5CP41229 1560 aa22.15■■□□□ 1.14
RAB5B-202ENST00000448789 TSPOAP1O95153 1857 aa22.15■■□□□ 1.14
RAB5B-202ENST00000448789 DUOX2Q9NRD8 1548 aa22.14■■□□□ 1.14
RAB5B-202ENST00000448789 PZPP20742 1482 aa22.14■■□□□ 1.13
RAB5B-202ENST00000448789 KIDINS220Q9ULH0 1771 aa22.12■■□□□ 1.13
RAB5B-202ENST00000448789 RAPGEF3O95398 923 aa22.1■■□□□ 1.13
RAB5B-202ENST00000448789 MPHOSPH9Q99550 1183 aa22.1■■□□□ 1.13
RAB5B-202ENST00000448789 RICTORQ6R327 1708 aa22.09■■□□□ 1.13
RAB5B-202ENST00000448789 FRMPD1Q5SYB0 1578 aa22.09■■□□□ 1.13
RAB5B-202ENST00000448789 ERBINQ96RT1 1412 aa22.09■■□□□ 1.13
RAB5B-202ENST00000448789 TEX14Q8IWB6 1497 aa22.09■■□□□ 1.13
RAB5B-202ENST00000448789 KDM5DQ9BY66 1539 aa22.08■■□□□ 1.13
RAB5B-202ENST00000448789 HECW2Q9P2P5 1572 aa22.08■■□□□ 1.12
RAB5B-202ENST00000448789 ACIN1Q9UKV3 1341 aaKnown RBP22.08■■□□□ 1.12
RAB5B-202ENST00000448789 MLH3Q9UHC1 1453 aa22.07■■□□□ 1.12
RAB5B-202ENST00000448789 UNC13BO14795 1591 aa22.06■■□□□ 1.12
RAB5B-202ENST00000448789 SIN3AQ96ST3 1273 aa22.06■■□□□ 1.12
RAB5B-202ENST00000448789 MYT1LQ9UL68 1186 aa22.06■■□□□ 1.12
RAB5B-202ENST00000448789 NUP155O75694 1391 aa22.05■■□□□ 1.12
RAB5B-202ENST00000448789 FOXD1Q16676 465 aa22.04■■□□□ 1.12
RAB5B-202ENST00000448789 SLC4A1APQ9BWU0 796 aaKnown RBP22.04■■□□□ 1.12
RAB5B-202ENST00000448789 ABCA6Q8N139 1617 aa22.03■■□□□ 1.12
RAB5B-202ENST00000448789 MAGI2Q86UL8 1455 aa22.02■■□□□ 1.12
RAB5B-202ENST00000448789 DHX29Q7Z478 1369 aaKnown RBP22■■□□□ 1.11
RAB5B-202ENST00000448789 COL17A1Q9UMD9 1497 aaPredicted RBP21.99■■□□□ 1.11
RAB5B-202ENST00000448789 FAM135AQ9P2D6 1515 aa21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms