RNA–Protein interactions for RNA: ENST00000448217.2

SCAP-208, Transcript of SREBF chaperone, humanhuman

TSL 4

Gene SCAP, Length 550 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-208ENST00000448217 PTPN23Q9H3S7 1636 aa18.23■□□□□ 0.51
SCAP-208ENST00000448217 MAP3K4Q9Y6R4 1608 aa18.22■□□□□ 0.51
SCAP-208ENST00000448217 CFDP1Q9UEE9 299 aaPredicted RBP18.2■□□□□ 0.5
SCAP-208ENST00000448217 KIF13AQ9H1H9 1805 aa18.19■□□□□ 0.5
SCAP-208ENST00000448217 CD109Q6YHK3 1445 aa18.18■□□□□ 0.5
SCAP-208ENST00000448217 ARHGAP5Q13017 1502 aa18.17■□□□□ 0.5
SCAP-208ENST00000448217 CAMSAP2Q08AD1 1489 aa18.16■□□□□ 0.5
SCAP-208ENST00000448217 PLEKHH2Q8IVE3 1493 aa18.15■□□□□ 0.5
SCAP-208ENST00000448217 EFCAB2Q5VUJ9 269 aa18.15■□□□□ 0.5
SCAP-208ENST00000448217 SAMD9LQ8IVG5 1584 aa18.15■□□□□ 0.5
SCAP-208ENST00000448217 KIAA1107Q9UPP5 1409 aa18.15■□□□□ 0.5
SCAP-208ENST00000448217 CFAP74Q9C0B2 1584 aa18.14■□□□□ 0.49
SCAP-208ENST00000448217 FAM69CQ0P6D2 419 aa18.13■□□□□ 0.49
SCAP-208ENST00000448217 FANCAO15360 1455 aa18.13■□□□□ 0.49
SCAP-208ENST00000448217 NEO1Q92859 1461 aa18.12■□□□□ 0.49
SCAP-208ENST00000448217 ARHGEF5Q12774 1597 aa18.12■□□□□ 0.49
SCAP-208ENST00000448217 DNMT1P26358 1616 aaKnown RBP18.12■□□□□ 0.49
SCAP-208ENST00000448217 ZNF644Q9H582 1327 aaPredicted RBP18.11■□□□□ 0.49
SCAP-208ENST00000448217 PPRC1Q5VV67 1664 aaKnown RBP18.1■□□□□ 0.49
SCAP-208ENST00000448217 ABCC1P33527 1531 aa18.1■□□□□ 0.49
SCAP-208ENST00000448217 MBD5Q9P267 1494 aa18.1■□□□□ 0.49
SCAP-208ENST00000448217 FAM50AQ14320 339 aaKnown RBP18.1■□□□□ 0.49
SCAP-208ENST00000448217 RSPH4AQ5TD94 716 aa18.09■□□□□ 0.49
SCAP-208ENST00000448217 TEX14Q8IWB6 1497 aa18.07■□□□□ 0.48
SCAP-208ENST00000448217 ABCC5O15440 1437 aa18.06■□□□□ 0.48
SCAP-208ENST00000448217 DAPK1P53355 1430 aa18.06■□□□□ 0.48
SCAP-208ENST00000448217 AKNAQ7Z591 1439 aa18.06■□□□□ 0.48
SCAP-208ENST00000448217 PCGF6Q9BYE7 350 aa18.06■□□□□ 0.48
SCAP-208ENST00000448217 ZNF777Q9ULD5 760 aaPredicted RBP18.06■□□□□ 0.48
SCAP-208ENST00000448217 SHANK2Q9UPX8 1470 aa18.06■□□□□ 0.48
SCAP-208ENST00000448217 CROCC2H7BZ55 1655 aa18.06■□□□□ 0.48
SCAP-208ENST00000448217 SYCP2Q9BX26 1530 aa18.05■□□□□ 0.48
SCAP-208ENST00000448217 ARHGEF12Q9NZN5 1544 aa18.05■□□□□ 0.48
SCAP-208ENST00000448217 CCDC141Q6ZP82 1450 aa18.04■□□□□ 0.48
SCAP-208ENST00000448217 PTPRKQ15262 1439 aa18.04■□□□□ 0.48
SCAP-208ENST00000448217 ADGRL1O94910 1474 aa18.03■□□□□ 0.48
SCAP-208ENST00000448217 MAST1Q9Y2H9 1570 aa18.02■□□□□ 0.48
SCAP-208ENST00000448217 TSPOAP1O95153 1857 aa18.01■□□□□ 0.47
SCAP-208ENST00000448217 ROCK1Q13464 1354 aa18.01■□□□□ 0.47
SCAP-208ENST00000448217 ADGRL2O95490 1459 aa18.01■□□□□ 0.47
SCAP-208ENST00000448217 SCAPERQ9BY12 1400 aa18■□□□□ 0.47
SCAP-208ENST00000448217 HNRNPMP52272 730 aaKnown RBP eCLIP18■□□□□ 0.472e-7■■■■■ 30.3
SCAP-208ENST00000448217 TRAPPC8Q9Y2L5 1435 aa17.98■□□□□ 0.47
SCAP-208ENST00000448217 ADGBQ8N7X0 1667 aa17.98■□□□□ 0.47
SCAP-208ENST00000448217 RTEL1-TNFRSF6BF6WH68 1400 aa17.97■□□□□ 0.47
SCAP-208ENST00000448217 POGZQ7Z3K3 1410 aa17.97■□□□□ 0.47
SCAP-208ENST00000448217 KDM5CP41229 1560 aa17.96■□□□□ 0.47
SCAP-208ENST00000448217 ZNF518AQ6AHZ1 1483 aa17.96■□□□□ 0.47
SCAP-208ENST00000448217 C9orf84Q5VXU9 1444 aa17.96■□□□□ 0.47
SCAP-208ENST00000448217 DENND4BO75064 1496 aaPredicted RBP17.95■□□□□ 0.46
SCAP-208ENST00000448217 TSPY4P0CV99 314 aa17.95■□□□□ 0.46
SCAP-208ENST00000448217 TSPY10P0CW01 314 aa17.95■□□□□ 0.46
SCAP-208ENST00000448217 HFM1A2PYH4 1435 aa17.95■□□□□ 0.46
SCAP-208ENST00000448217 RICTORQ6R327 1708 aa17.95■□□□□ 0.46
SCAP-208ENST00000448217 ITGAEP38570 1179 aa17.94■□□□□ 0.46
SCAP-208ENST00000448217 NCOA1Q15788 1441 aa17.94■□□□□ 0.46
SCAP-208ENST00000448217 PLXNC1O60486 1568 aa17.93■□□□□ 0.46
SCAP-208ENST00000448217 INO80Q9ULG1 1556 aaPredicted RBP17.93■□□□□ 0.46
SCAP-208ENST00000448217 GCC2Q8IWJ2 1684 aa17.93■□□□□ 0.46
SCAP-208ENST00000448217 MLH3Q9UHC1 1453 aa17.92■□□□□ 0.46
SCAP-208ENST00000448217 ANKRD30AQ9BXX3 1397 aa17.91■□□□□ 0.46
SCAP-208ENST00000448217 NAIPQ13075 1403 aa17.91■□□□□ 0.46
SCAP-208ENST00000448217 TRHP20396 242 aaPredicted RBP17.91■□□□□ 0.46
SCAP-208ENST00000448217 HRCP23327 699 aa17.91■□□□□ 0.46
SCAP-208ENST00000448217 ZFYVE16Q7Z3T8 1539 aa17.91■□□□□ 0.46
SCAP-208ENST00000448217 ZMYM4Q5VZL5 1548 aa17.9■□□□□ 0.46
SCAP-208ENST00000448217 AFAP1Q8N556 730 aa17.9■□□□□ 0.46
SCAP-208ENST00000448217 FRMPD1Q5SYB0 1578 aa17.9■□□□□ 0.46
SCAP-208ENST00000448217 SETD5Q9C0A6 1442 aa17.89■□□□□ 0.46
SCAP-208ENST00000448217 ATP7AQ04656 1500 aa17.88■□□□□ 0.45
SCAP-208ENST00000448217 CHIC2Q9UKJ5 165 aa17.88■□□□□ 0.45
SCAP-208ENST00000448217 SPAG9O60271 1321 aaKnown RBP17.88■□□□□ 0.45
SCAP-208ENST00000448217 KIDINS220Q9ULH0 1771 aa17.88■□□□□ 0.45
SCAP-208ENST00000448217 HECW2Q9P2P5 1572 aa17.87■□□□□ 0.45
SCAP-208ENST00000448217 ACIN1Q9UKV3 1341 aaKnown RBP17.86■□□□□ 0.45
SCAP-208ENST00000448217 MAGI2Q86UL8 1455 aa17.86■□□□□ 0.45
SCAP-208ENST00000448217 COL17A1Q9UMD9 1497 aaPredicted RBP17.86■□□□□ 0.45
SCAP-208ENST00000448217 KIF15Q9NS87 1388 aa17.84■□□□□ 0.45
SCAP-208ENST00000448217 DUOX2Q9NRD8 1548 aa17.83■□□□□ 0.45
SCAP-208ENST00000448217 RAPGEF3O95398 923 aa17.83■□□□□ 0.44
SCAP-208ENST00000448217 RRP7BPQ9NSQ0 103 aa17.83■□□□□ 0.44
SCAP-208ENST00000448217 RAB3GAP2Q9H2M9 1393 aa17.82■□□□□ 0.44
SCAP-208ENST00000448217 ANKRD50Q9ULJ7 1429 aa17.81■□□□□ 0.44
SCAP-208ENST00000448217 ERBINQ96RT1 1412 aa17.8■□□□□ 0.44
SCAP-208ENST00000448217 ABCA6Q8N139 1617 aa17.79■□□□□ 0.44
SCAP-208ENST00000448217 DIP2CQ9Y2E4 1556 aa17.79■□□□□ 0.44
SCAP-208ENST00000448217 KDM6BO15054 1643 aa17.78■□□□□ 0.44
SCAP-208ENST00000448217 EIF2AK4Q9P2K8 1649 aaKnown RBP17.77■□□□□ 0.44
SCAP-208ENST00000448217 REREQ9P2R6 1566 aa17.77■□□□□ 0.44
SCAP-208ENST00000448217 DHX29Q7Z478 1369 aaKnown RBP17.77■□□□□ 0.43
SCAP-208ENST00000448217 BCORL1Q5H9F3 1711 aa17.76■□□□□ 0.43
SCAP-208ENST00000448217 A2MP01023 1474 aa17.75■□□□□ 0.43
SCAP-208ENST00000448217 ARHGEF40Q8TER5 1519 aa17.74■□□□□ 0.43
SCAP-208ENST00000448217 YEATS2Q9ULM3 1422 aa17.73■□□□□ 0.43
SCAP-208ENST00000448217 ATP10AO60312 1499 aa17.73■□□□□ 0.43
SCAP-208ENST00000448217 UNC13BO14795 1591 aa17.72■□□□□ 0.43
SCAP-208ENST00000448217 KDM5DQ9BY66 1539 aa17.72■□□□□ 0.43
SCAP-208ENST00000448217 DEPDC5O75140 1603 aa17.71■□□□□ 0.43
SCAP-208ENST00000448217 AGLP35573 1532 aa17.69■□□□□ 0.42
SCAP-208ENST00000448217 MYT1LQ9UL68 1186 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms