RNA–Protein interactions for RNA: ENST00000447866.5

FDPS-203, Transcript of farnesyl diphosphate synthase, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene FDPS, Length 1,256 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-203ENST00000447866 CDC42BPAQ5VT25 1732 aa23.73■■□□□ 1.39
FDPS-203ENST00000447866 CCNB3Q8WWL7 1395 aa23.72■■□□□ 1.39
FDPS-203ENST00000447866 NCOA2Q15596 1464 aa23.7■■□□□ 1.38
FDPS-203ENST00000447866 SUPT6HQ7KZ85 1726 aaKnown RBP23.7■■□□□ 1.38
FDPS-203ENST00000447866 ARHGAP5Q13017 1502 aa23.69■■□□□ 1.38
FDPS-203ENST00000447866 RAPGEF3O95398 923 aa23.69■■□□□ 1.38
FDPS-203ENST00000447866 CFDP1Q9UEE9 299 aaPredicted RBP23.68■■□□□ 1.38
FDPS-203ENST00000447866 PREX2Q70Z35 1606 aa23.68■■□□□ 1.38
FDPS-203ENST00000447866 CFAP74Q9C0B2 1584 aa23.67■■□□□ 1.38
FDPS-203ENST00000447866 ZNF777Q9ULD5 760 aaPredicted RBP23.66■■□□□ 1.38
FDPS-203ENST00000447866 SCAPERQ9BY12 1400 aa23.65■■□□□ 1.38
FDPS-203ENST00000447866 DENND4BO75064 1496 aaPredicted RBP23.62■■□□□ 1.37
FDPS-203ENST00000447866 ADGRL1O94910 1474 aa23.62■■□□□ 1.37
FDPS-203ENST00000447866 ZNF644Q9H582 1327 aaPredicted RBP23.59■■□□□ 1.37
FDPS-203ENST00000447866 PPARGC1BQ86YN6 1023 aaKnown RBP23.58■■□□□ 1.37
FDPS-203ENST00000447866 AFAP1Q8N556 730 aa23.57■■□□□ 1.36
FDPS-203ENST00000447866 ARHGEF12Q9NZN5 1544 aa23.57■■□□□ 1.36
FDPS-203ENST00000447866 ITSN2Q9NZM3 1697 aa23.57■■□□□ 1.36
FDPS-203ENST00000447866 HNRNPMP52272 730 aaKnown RBP eCLIP23.56■■□□□ 1.36
FDPS-203ENST00000447866 SAMD9LQ8IVG5 1584 aa23.56■■□□□ 1.36
FDPS-203ENST00000447866 RICTORQ6R327 1708 aa23.56■■□□□ 1.36
FDPS-203ENST00000447866 FRMPD1Q5SYB0 1578 aa23.55■■□□□ 1.36
FDPS-203ENST00000447866 ABCC1P33527 1531 aa23.53■■□□□ 1.36
FDPS-203ENST00000447866 MYOM3Q5VTT5 1437 aa23.52■■□□□ 1.36
FDPS-203ENST00000447866 POGZQ7Z3K3 1410 aa23.52■■□□□ 1.36
FDPS-203ENST00000447866 KIAA1107Q9UPP5 1409 aa23.51■■□□□ 1.35
FDPS-203ENST00000447866 TRAPPC8Q9Y2L5 1435 aa23.51■■□□□ 1.35
FDPS-203ENST00000447866 PLEKHH2Q8IVE3 1493 aa23.49■■□□□ 1.35
FDPS-203ENST00000447866 MIA2Q96PC5 1412 aa23.48■■□□□ 1.35
FDPS-203ENST00000447866 SYCP2Q9BX26 1530 aa23.47■■□□□ 1.35
FDPS-203ENST00000447866 ZNF518AQ6AHZ1 1483 aa23.46■■□□□ 1.35
FDPS-203ENST00000447866 MBD5Q9P267 1494 aa23.45■■□□□ 1.34
FDPS-203ENST00000447866 ZMYM4Q5VZL5 1548 aa23.44■■□□□ 1.34
FDPS-203ENST00000447866 CAMSAP2Q08AD1 1489 aa23.43■■□□□ 1.34
FDPS-203ENST00000447866 MAGI2Q86UL8 1455 aa23.43■■□□□ 1.34
FDPS-203ENST00000447866 RSPH4AQ5TD94 716 aa23.42■■□□□ 1.34
FDPS-203ENST00000447866 MYT1LQ9UL68 1186 aa23.42■■□□□ 1.34
FDPS-203ENST00000447866 KDM5CP41229 1560 aa23.42■■□□□ 1.34
FDPS-203ENST00000447866 YEATS2Q9ULM3 1422 aa23.41■■□□□ 1.34
FDPS-203ENST00000447866 MLH3Q9UHC1 1453 aa23.4■■□□□ 1.34
FDPS-203ENST00000447866 FGD6Q6ZV73 1430 aa23.4■■□□□ 1.34
FDPS-203ENST00000447866 SPAG9O60271 1321 aaKnown RBP23.38■■□□□ 1.33
FDPS-203ENST00000447866 ZFYVE16Q7Z3T8 1539 aa23.38■■□□□ 1.33
FDPS-203ENST00000447866 PTPN23Q9H3S7 1636 aa23.37■■□□□ 1.33
FDPS-203ENST00000447866 KIDINS220Q9ULH0 1771 aa23.35■■□□□ 1.33
FDPS-203ENST00000447866 ATP10AO60312 1499 aa23.34■■□□□ 1.33
FDPS-203ENST00000447866 TCOF1Q13428 1488 aaKnown RBP23.34■■□□□ 1.33
FDPS-203ENST00000447866 ARHGEF5Q12774 1597 aa23.34■■□□□ 1.33
FDPS-203ENST00000447866 HECW2Q9P2P5 1572 aa23.34■■□□□ 1.33
FDPS-203ENST00000447866 ARHGEF40Q8TER5 1519 aa23.33■■□□□ 1.33
FDPS-203ENST00000447866 TSPY4P0CV99 314 aa23.33■■□□□ 1.33
FDPS-203ENST00000447866 TSPY10P0CW01 314 aa23.33■■□□□ 1.33
FDPS-203ENST00000447866 CCDC141Q6ZP82 1450 aa23.32■■□□□ 1.32
FDPS-203ENST00000447866 FAM50AQ14320 339 aaKnown RBP23.31■■□□□ 1.32
FDPS-203ENST00000447866 RTEL1-TNFRSF6BF6WH68 1400 aa23.29■■□□□ 1.32
FDPS-203ENST00000447866 ARID4BQ4LE39 1312 aaPredicted RBP23.29■■□□□ 1.32
FDPS-203ENST00000447866 DIP2CQ9Y2E4 1556 aa23.28■■□□□ 1.32
FDPS-203ENST00000447866 ATP7AQ04656 1500 aa23.28■■□□□ 1.32
FDPS-203ENST00000447866 ABCC5O15440 1437 aa23.27■■□□□ 1.32
FDPS-203ENST00000447866 ABCA6Q8N139 1617 aa23.27■■□□□ 1.32
FDPS-203ENST00000447866 KDM4FA0A1W2PPD8 638 aa23.27■■□□□ 1.32
FDPS-203ENST00000447866 INO80Q9ULG1 1556 aaPredicted RBP23.27■■□□□ 1.32
FDPS-203ENST00000447866 C9orf84Q5VXU9 1444 aa23.26■■□□□ 1.31
FDPS-203ENST00000447866 SIGLEC1Q9BZZ2 1709 aa23.25■■□□□ 1.31
FDPS-203ENST00000447866 DAPK1P53355 1430 aa23.23■■□□□ 1.31
FDPS-203ENST00000447866 DNMT1P26358 1616 aaKnown RBP23.22■■□□□ 1.31
FDPS-203ENST00000447866 MAST1Q9Y2H9 1570 aa23.2■■□□□ 1.3
FDPS-203ENST00000447866 CHIC2Q9UKJ5 165 aa23.2■■□□□ 1.3
FDPS-203ENST00000447866 REREQ9P2R6 1566 aa23.19■■□□□ 1.3
FDPS-203ENST00000447866 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.19■■□□□ 1.33e-6■□□□□ 10.4
FDPS-203ENST00000447866 MLECQ14165 292 aa23.19■■□□□ 1.3
FDPS-203ENST00000447866 RRBP1Q9P2E9 1410 aaKnown RBP23.18■■□□□ 1.3
FDPS-203ENST00000447866 A2MP01023 1474 aa23.17■■□□□ 1.3
FDPS-203ENST00000447866 DHX29Q7Z478 1369 aaKnown RBP23.16■■□□□ 1.3
FDPS-203ENST00000447866 ADGBQ8N7X0 1667 aa23.16■■□□□ 1.3
FDPS-203ENST00000447866 BCORL1Q5H9F3 1711 aa23.16■■□□□ 1.3
FDPS-203ENST00000447866 CROCC2H7BZ55 1655 aa23.16■■□□□ 1.3
FDPS-203ENST00000447866 AGLP35573 1532 aa23.15■■□□□ 1.3
FDPS-203ENST00000447866 SHANK2Q9UPX8 1470 aa23.15■■□□□ 1.3
FDPS-203ENST00000447866 PTPRKQ15262 1439 aa23.14■■□□□ 1.29
FDPS-203ENST00000447866 ITGAEP38570 1179 aa23.13■■□□□ 1.29
FDPS-203ENST00000447866 RRP7BPQ9NSQ0 103 aa23.13■■□□□ 1.29
FDPS-203ENST00000447866 ADAMTSL3P82987 1691 aa23.12■■□□□ 1.29
FDPS-203ENST00000447866 PLXNC1O60486 1568 aa23.11■■□□□ 1.29
FDPS-203ENST00000447866 NCOA1Q15788 1441 aa23.09■■□□□ 1.29
FDPS-203ENST00000447866 ANKRD30AQ9BXX3 1397 aa23.09■■□□□ 1.29
FDPS-203ENST00000447866 KIF3BO15066 747 aa23.08■■□□□ 1.29
FDPS-203ENST00000447866 GGT6Q6P531 493 aa23.07■■□□□ 1.28
FDPS-203ENST00000447866 KIF15Q9NS87 1388 aa23.06■■□□□ 1.28
FDPS-203ENST00000447866 ADGRL2O95490 1459 aa23.05■■□□□ 1.28
FDPS-203ENST00000447866 MADDQ8WXG6 1647 aa23.04■■□□□ 1.28
FDPS-203ENST00000447866 DUOX2Q9NRD8 1548 aa23.04■■□□□ 1.28
FDPS-203ENST00000447866 AEBP2Q6ZN18 517 aaPredicted RBP23.04■■□□□ 1.28
FDPS-203ENST00000447866 ROCK1Q13464 1354 aa23.01■■□□□ 1.27
FDPS-203ENST00000447866 PPP6R1Q9UPN7 881 aa23■■□□□ 1.27
FDPS-203ENST00000447866 FER1L4A9Z1Z3 1794 aa22.99■■□□□ 1.27
FDPS-203ENST00000447866 RIMS1Q86UR5 1692 aaKnown RBP22.99■■□□□ 1.27
FDPS-203ENST00000447866 ESF1Q9H501 851 aaKnown RBP22.98■■□□□ 1.27
FDPS-203ENST00000447866 PTPRMP28827 1452 aa22.98■■□□□ 1.27
FDPS-203ENST00000447866 ERBINQ96RT1 1412 aa22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms