RNA–Protein interactions for RNA: ENST00000445902.2

VPS52-212, Transcript of VPS52, GARP complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS52, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-212ENST00000445902 HECW1Q76N89 1606 aa18.73■□□□□ 0.59
VPS52-212ENST00000445902 EXOC6Q8TAG9 804 aa18.72■□□□□ 0.59
VPS52-212ENST00000445902 PRDM2Q13029 1718 aa18.71■□□□□ 0.59
VPS52-212ENST00000445902 PDE4AP27815 886 aa18.7■□□□□ 0.58
VPS52-212ENST00000445902 ZNF326Q5BKZ1 582 aaKnown RBP18.7■□□□□ 0.58
VPS52-212ENST00000445902 BRPF3Q9ULD4 1205 aa18.7■□□□□ 0.58
VPS52-212ENST00000445902 SUPT6HQ7KZ85 1726 aaKnown RBP18.7■□□□□ 0.58
VPS52-212ENST00000445902 RAD54L2Q9Y4B4 1467 aa18.69■□□□□ 0.58
VPS52-212ENST00000445902 CTTNBP2Q8WZ74 1663 aa18.69■□□□□ 0.58
VPS52-212ENST00000445902 SKAP1Q86WV1 359 aa18.68■□□□□ 0.58
VPS52-212ENST00000445902 GCC2Q8IWJ2 1684 aa18.67■□□□□ 0.58
VPS52-212ENST00000445902 DHX29Q7Z478 1369 aaKnown RBP18.67■□□□□ 0.58
VPS52-212ENST00000445902 POLR1AO95602 1720 aaPredicted RBP18.66■□□□□ 0.58
VPS52-212ENST00000445902 TMC1Q8TDI8 760 aa18.66■□□□□ 0.58
VPS52-212ENST00000445902 ARID3CA6NKF2 412 aa18.66■□□□□ 0.58
VPS52-212ENST00000445902 SPATA31E1Q6ZUB1 1445 aa18.65■□□□□ 0.58
VPS52-212ENST00000445902 ABCA5Q8WWZ7 1642 aa18.63■□□□□ 0.57
VPS52-212ENST00000445902 TCERG1O14776 1098 aaKnown RBP18.63■□□□□ 0.57
VPS52-212ENST00000445902 RRP1P56182 461 aaKnown RBP18.63■□□□□ 0.57
VPS52-212ENST00000445902 PNISRQ8TF01 805 aaKnown RBP18.63■□□□□ 0.57
VPS52-212ENST00000445902 BACH2Q9BYV9 841 aa18.63■□□□□ 0.57
VPS52-212ENST00000445902 USP35Q9P2H5 1018 aa18.62■□□□□ 0.57
VPS52-212ENST00000445902 MAGI3Q5TCQ9 1506 aa18.61■□□□□ 0.57
VPS52-212ENST00000445902 EIF5BO60841 1220 aaKnown RBP18.61■□□□□ 0.57
VPS52-212ENST00000445902 TEX14Q8IWB6 1497 aa18.61■□□□□ 0.57
VPS52-212ENST00000445902 WASHC2CQ9Y4E1 1318 aa18.61■□□□□ 0.57
VPS52-212ENST00000445902 SLC4A3P48751 1232 aa18.6■□□□□ 0.57
VPS52-212ENST00000445902 UGGT2Q9NYU1 1516 aa18.6■□□□□ 0.57
VPS52-212ENST00000445902 EHBP1L1Q8N3D4 1523 aa18.6■□□□□ 0.57
VPS52-212ENST00000445902 PPM1GO15355 546 aaPredicted RBP18.6■□□□□ 0.57
VPS52-212ENST00000445902 RPRD2Q5VT52 1461 aaKnown RBP18.59■□□□□ 0.57
VPS52-212ENST00000445902 BCORL1Q5H9F3 1711 aa18.59■□□□□ 0.57
VPS52-212ENST00000445902 ANKRD30BQ9BXX2 1392 aa18.59■□□□□ 0.57
VPS52-212ENST00000445902 CADPSQ9ULU8 1353 aa18.59■□□□□ 0.57
VPS52-212ENST00000445902 SLC4A1APQ9BWU0 796 aaKnown RBP18.58■□□□□ 0.57
VPS52-212ENST00000445902 GRIN2BQ13224 1484 aa18.58■□□□□ 0.57
VPS52-212ENST00000445902 RCAN3Q9UKA8 241 aa18.57■□□□□ 0.56
VPS52-212ENST00000445902 USP47Q96K76 1375 aa18.55■□□□□ 0.56
VPS52-212ENST00000445902 PLIN1O60240 522 aa18.55■□□□□ 0.56
VPS52-212ENST00000445902 GSE1Q14687 1217 aa18.55■□□□□ 0.56
VPS52-212ENST00000445902 NFKBIBQ15653 356 aa18.52■□□□□ 0.56
VPS52-212ENST00000445902 FRAT1Q92837 279 aaPredicted RBP18.52■□□□□ 0.56
VPS52-212ENST00000445902 CUL7Q14999 1698 aa18.51■□□□□ 0.55
VPS52-212ENST00000445902 TCOF1Q13428 1488 aaKnown RBP18.51■□□□□ 0.55
VPS52-212ENST00000445902 CC2D2AQ9P2K1 1620 aa18.5■□□□□ 0.55
VPS52-212ENST00000445902 ARHGEF11O15085 1522 aa18.5■□□□□ 0.55
VPS52-212ENST00000445902 SAMD9Q5K651 1589 aa18.5■□□□□ 0.55
VPS52-212ENST00000445902 POLA1P09884 1462 aaPredicted RBP18.5■□□□□ 0.55
VPS52-212ENST00000445902 MS4A1P11836 297 aa18.49■□□□□ 0.55
VPS52-212ENST00000445902 CDCA7LQ96GN5 454 aa18.49■□□□□ 0.55
VPS52-212ENST00000445902 ABCA10Q8WWZ4 1543 aa18.49■□□□□ 0.55
VPS52-212ENST00000445902 UBE2Q2Q8WVN8 375 aa18.48■□□□□ 0.55
VPS52-212ENST00000445902 MIA2Q96PC5 1412 aa18.48■□□□□ 0.55
VPS52-212ENST00000445902 FANCD2Q9BXW9 1451 aa18.48■□□□□ 0.55
VPS52-212ENST00000445902 DDRGK1Q96HY6 314 aa18.46■□□□□ 0.55
VPS52-212ENST00000445902 ZNF644Q9H582 1327 aaPredicted RBP18.45■□□□□ 0.54
VPS52-212ENST00000445902 DAXXQ9UER7 740 aaPredicted RBP18.45■□□□□ 0.54
VPS52-212ENST00000445902 LRPPRCP42704 1394 aaKnown RBP18.45■□□□□ 0.54
VPS52-212ENST00000445902 CRBNQ96SW2 442 aa18.45■□□□□ 0.54
VPS52-212ENST00000445902 CDK13Q14004 1512 aaKnown RBP18.44■□□□□ 0.54
VPS52-212ENST00000445902 THOC2Q8NI27 1593 aaKnown RBP18.44■□□□□ 0.54
VPS52-212ENST00000445902 TDRD9Q8NDG6 1382 aaKnown RBP18.43■□□□□ 0.54
VPS52-212ENST00000445902 MYBBP1AQ9BQG0 1328 aaKnown RBP18.42■□□□□ 0.54
VPS52-212ENST00000445902 KIF15Q9NS87 1388 aa18.42■□□□□ 0.54
VPS52-212ENST00000445902 TOPBP1Q92547 1522 aa18.41■□□□□ 0.54
VPS52-212ENST00000445902 DNMBPQ6XZF7 1577 aa18.41■□□□□ 0.54
VPS52-212ENST00000445902 KDM5CP41229 1560 aa18.41■□□□□ 0.54
VPS52-212ENST00000445902 DAPK1P53355 1430 aa18.4■□□□□ 0.54
VPS52-212ENST00000445902 CARD11Q9BXL7 1154 aa18.39■□□□□ 0.54
VPS52-212ENST00000445902 FRAT2O75474 233 aaPredicted RBP18.39■□□□□ 0.53
VPS52-212ENST00000445902 BRD4O60885 1362 aaPredicted RBP18.39■□□□□ 0.53
VPS52-212ENST00000445902 KDM2AQ9Y2K7 1162 aa18.39■□□□□ 0.53
VPS52-212ENST00000445902 C20orf194Q5TEA3 1177 aa18.38■□□□□ 0.53
VPS52-212ENST00000445902 ST20-MTHFSA0A0A6YYL1 179 aa18.37■□□□□ 0.53
VPS52-212ENST00000445902 EPRSP07814 1512 aaKnown RBP18.36■□□□□ 0.53
VPS52-212ENST00000445902 NESP48681 1621 aa18.36■□□□□ 0.53
VPS52-212ENST00000445902 MBD5Q9P267 1494 aa18.36■□□□□ 0.53
VPS52-212ENST00000445902 ABCC5O15440 1437 aa18.36■□□□□ 0.53
VPS52-212ENST00000445902 KIF14Q15058 1648 aa18.35■□□□□ 0.53
VPS52-212ENST00000445902 PKD2Q13563 968 aa18.34■□□□□ 0.53
VPS52-212ENST00000445902 PZPP20742 1482 aa18.34■□□□□ 0.53
VPS52-212ENST00000445902 ROCK2O75116 1388 aaKnown RBP18.34■□□□□ 0.53
VPS52-212ENST00000445902 RALBP1Q15311 655 aa18.34■□□□□ 0.53
VPS52-212ENST00000445902 DCAF11Q8TEB1 546 aa18.34■□□□□ 0.53
VPS52-212ENST00000445902 ARID4BQ4LE39 1312 aaPredicted RBP18.32■□□□□ 0.52
VPS52-212ENST00000445902 ROCK1Q13464 1354 aa18.31■□□□□ 0.52
VPS52-212ENST00000445902 PDE3BQ13370 1112 aa18.31■□□□□ 0.52
VPS52-212ENST00000445902 RGS3P49796 1198 aa18.3■□□□□ 0.52
VPS52-212ENST00000445902 NLRP13Q86W25 1043 aa18.3■□□□□ 0.52
VPS52-212ENST00000445902 DNMT1P26358 1616 aaKnown RBP18.3■□□□□ 0.52
VPS52-212ENST00000445902 KIF21AQ7Z4S6 1674 aa18.29■□□□□ 0.52
VPS52-212ENST00000445902 CC2D1BQ5T0F9 858 aaKnown RBP18.29■□□□□ 0.52
VPS52-212ENST00000445902 KIAA1107Q9UPP5 1409 aa18.27■□□□□ 0.52
VPS52-212ENST00000445902 C8orf34Q49A92 452 aa18.27■□□□□ 0.52
VPS52-212ENST00000445902 ZNF777Q9ULD5 760 aaPredicted RBP18.27■□□□□ 0.52
VPS52-212ENST00000445902 LAMC3Q9Y6N6 1575 aa18.27■□□□□ 0.52
VPS52-212ENST00000445902 GAPVD1Q14C86 1478 aa18.26■□□□□ 0.51
VPS52-212ENST00000445902 KTN1Q86UP2 1357 aaKnown RBP18.26■□□□□ 0.51
VPS52-212ENST00000445902 FAM161AQ3B820 660 aa18.25■□□□□ 0.51
VPS52-212ENST00000445902 KDM2BQ8NHM5 1336 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms