RNA–Protein interactions for RNA: ENST00000445889.5

ERCC3-203, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,920 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-203ENST00000445889 EHBP1L1Q8N3D4 1523 aa19.43■□□□□ 0.7
ERCC3-203ENST00000445889 SAMD9Q5K651 1589 aa19.42■□□□□ 0.7
ERCC3-203ENST00000445889 NCOA1Q15788 1441 aa19.41■□□□□ 0.7
ERCC3-203ENST00000445889 ZBED9Q6R2W3 1325 aa19.41■□□□□ 0.7
ERCC3-203ENST00000445889 ANKRD30BQ9BXX2 1392 aa19.39■□□□□ 0.7
ERCC3-203ENST00000445889 AKNAQ7Z591 1439 aa19.39■□□□□ 0.69
ERCC3-203ENST00000445889 NBR1Q14596 966 aa19.38■□□□□ 0.69
ERCC3-203ENST00000445889 EPRSP07814 1512 aaKnown RBP19.38■□□□□ 0.69
ERCC3-203ENST00000445889 SALL2Q9Y467 1007 aaPredicted RBP19.38■□□□□ 0.69
ERCC3-203ENST00000445889 ERICH6BQ5W0A0 696 aa19.36■□□□□ 0.69
ERCC3-203ENST00000445889 PAK3O75914 559 aaPredicted RBP19.35■□□□□ 0.69
ERCC3-203ENST00000445889 ARHGEF11O15085 1522 aa19.34■□□□□ 0.69
ERCC3-203ENST00000445889 KDM2AQ9Y2K7 1162 aa19.34■□□□□ 0.69
ERCC3-203ENST00000445889 THOC2Q8NI27 1593 aaKnown RBP19.33■□□□□ 0.69
ERCC3-203ENST00000445889 PDS5BQ9NTI5 1447 aa19.33■□□□□ 0.69
ERCC3-203ENST00000445889 TCOF1Q13428 1488 aaKnown RBP19.33■□□□□ 0.68
ERCC3-203ENST00000445889 ABCA5Q8WWZ7 1642 aa19.31■□□□□ 0.68
ERCC3-203ENST00000445889 CCDC136Q96JN2 1154 aa19.31■□□□□ 0.68
ERCC3-203ENST00000445889 ABCC5O15440 1437 aa19.31■□□□□ 0.68
ERCC3-203ENST00000445889 LAMC3Q9Y6N6 1575 aa19.31■□□□□ 0.68
ERCC3-203ENST00000445889 PKD2Q13563 968 aa19.31■□□□□ 0.68
ERCC3-203ENST00000445889 DAPK1P53355 1430 aa19.3■□□□□ 0.68
ERCC3-203ENST00000445889 RPRD2Q5VT52 1461 aaKnown RBP19.3■□□□□ 0.68
ERCC3-203ENST00000445889 CFDP1Q9UEE9 299 aaPredicted RBP19.29■□□□□ 0.68
ERCC3-203ENST00000445889 SPATA31E1Q6ZUB1 1445 aa19.28■□□□□ 0.68
ERCC3-203ENST00000445889 HECW1Q76N89 1606 aa19.28■□□□□ 0.68
ERCC3-203ENST00000445889 TMC1Q8TDI8 760 aa19.28■□□□□ 0.68
ERCC3-203ENST00000445889 MIA2Q96PC5 1412 aa19.27■□□□□ 0.67
ERCC3-203ENST00000445889 TEX14Q8IWB6 1497 aa19.27■□□□□ 0.67
ERCC3-203ENST00000445889 USP47Q96K76 1375 aa19.25■□□□□ 0.67
ERCC3-203ENST00000445889 NUDCQ9Y266 331 aa19.25■□□□□ 0.67
ERCC3-203ENST00000445889 GCC2Q8IWJ2 1684 aa19.25■□□□□ 0.67
ERCC3-203ENST00000445889 FBLN2P98095 1184 aa19.24■□□□□ 0.67
ERCC3-203ENST00000445889 DEKP35659 375 aaKnown RBP19.24■□□□□ 0.67
ERCC3-203ENST00000445889 DHX29Q7Z478 1369 aaKnown RBP19.24■□□□□ 0.67
ERCC3-203ENST00000445889 NOP58Q9Y2X3 529 aaKnown RBP19.23■□□□□ 0.67
ERCC3-203ENST00000445889 PRG4Q92954 1404 aaPredicted RBP19.22■□□□□ 0.67
ERCC3-203ENST00000445889 CARD11Q9BXL7 1154 aa19.22■□□□□ 0.67
ERCC3-203ENST00000445889 PNISRQ8TF01 805 aaKnown RBP19.21■□□□□ 0.67
ERCC3-203ENST00000445889 ST20-MTHFSA0A0A6YYL1 179 aa19.2■□□□□ 0.66
ERCC3-203ENST00000445889 IQGAP2Q13576 1575 aa19.2■□□□□ 0.66
ERCC3-203ENST00000445889 NPM2Q86SE8 214 aaKnown RBP19.19■□□□□ 0.66
ERCC3-203ENST00000445889 ROCK1Q13464 1354 aa19.17■□□□□ 0.66
ERCC3-203ENST00000445889 WDR62O43379 1518 aa19.17■□□□□ 0.66
ERCC3-203ENST00000445889 DCAF11Q8TEB1 546 aa19.16■□□□□ 0.66
ERCC3-203ENST00000445889 SMG6Q86US8 1419 aaKnown RBP19.16■□□□□ 0.66
ERCC3-203ENST00000445889 PZPP20742 1482 aa19.15■□□□□ 0.66
ERCC3-203ENST00000445889 ZNF608Q9ULD9 1512 aaPredicted RBP19.15■□□□□ 0.66
ERCC3-203ENST00000445889 TARBP1Q13395 1621 aaKnown RBP19.13■□□□□ 0.65
ERCC3-203ENST00000445889 NUP153P49790 1475 aaKnown RBP19.13■□□□□ 0.65
ERCC3-203ENST00000445889 EXOC6Q8TAG9 804 aa19.13■□□□□ 0.65
ERCC3-203ENST00000445889 KIF21AQ7Z4S6 1674 aa19.13■□□□□ 0.65
ERCC3-203ENST00000445889 RGL3Q3MIN7 710 aa19.12■□□□□ 0.65
ERCC3-203ENST00000445889 SKAP1Q86WV1 359 aa19.12■□□□□ 0.65
ERCC3-203ENST00000445889 NUP155O75694 1391 aa19.12■□□□□ 0.65
ERCC3-203ENST00000445889 ANP32AP39687 249 aaKnown RBP19.11■□□□□ 0.65
ERCC3-203ENST00000445889 BCORL1Q5H9F3 1711 aa19.1■□□□□ 0.65
ERCC3-203ENST00000445889 CDCA7LQ96GN5 454 aa19.08■□□□□ 0.65
ERCC3-203ENST00000445889 KIAA1107Q9UPP5 1409 aa19.08■□□□□ 0.65
ERCC3-203ENST00000445889 HNRNPMP52272 730 aaKnown RBP eCLIP19.08■□□□□ 0.642e-6■■■■□ 23.4
ERCC3-203ENST00000445889 PLB1Q6P1J6 1458 aa19.08■□□□□ 0.64
ERCC3-203ENST00000445889 PLIN1O60240 522 aa19.07■□□□□ 0.64
ERCC3-203ENST00000445889 IPO9Q96P70 1041 aaKnown RBP19.07■□□□□ 0.64
ERCC3-203ENST00000445889 ZBTB47Q9UFB7 747 aaPredicted RBP19.07■□□□□ 0.64
ERCC3-203ENST00000445889 DISP1Q96F81 1524 aa19.07■□□□□ 0.64
ERCC3-203ENST00000445889 RNF123Q5XPI4 1314 aa19.07■□□□□ 0.64
ERCC3-203ENST00000445889 CHMP7Q8WUX9 453 aaPredicted RBP19.06■□□□□ 0.64
ERCC3-203ENST00000445889 DNMT1P26358 1616 aaKnown RBP19.06■□□□□ 0.64
ERCC3-203ENST00000445889 CAMSAP2Q08AD1 1489 aa19.06■□□□□ 0.64
ERCC3-203ENST00000445889 MYT1LQ9UL68 1186 aa19.05■□□□□ 0.64
ERCC3-203ENST00000445889 CC2D1BQ5T0F9 858 aaKnown RBP19.05■□□□□ 0.64
ERCC3-203ENST00000445889 ANKRD50Q9ULJ7 1429 aa19.04■□□□□ 0.64
ERCC3-203ENST00000445889 NBPF1Q3BBV0 1214 aa19.04■□□□□ 0.64
ERCC3-203ENST00000445889 ADAMTS12P58397 1594 aa19.03■□□□□ 0.64
ERCC3-203ENST00000445889 RRP1P56182 461 aaKnown RBP19.03■□□□□ 0.64
ERCC3-203ENST00000445889 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.03■□□□□ 0.641e-11■■■■□ 21.4
ERCC3-203ENST00000445889 GPATCH8Q9UKJ3 1502 aaKnown RBP19.02■□□□□ 0.64
ERCC3-203ENST00000445889 RCAN3Q9UKA8 241 aa19.02■□□□□ 0.64
ERCC3-203ENST00000445889 ANKRD30AQ9BXX3 1397 aa19.02■□□□□ 0.64
ERCC3-203ENST00000445889 LAS1LQ9Y4W2 734 aaKnown RBP19.01■□□□□ 0.63
ERCC3-203ENST00000445889 TSPY4P0CV99 314 aa19.01■□□□□ 0.63
ERCC3-203ENST00000445889 TSPY10P0CW01 314 aa19.01■□□□□ 0.63
ERCC3-203ENST00000445889 PBRM1Q86U86 1689 aa19.01■□□□□ 0.63
ERCC3-203ENST00000445889 TROQ12816 1431 aaPredicted RBP19.01■□□□□ 0.63
ERCC3-203ENST00000445889 MYBBP1AQ9BQG0 1328 aaKnown RBP19■□□□□ 0.63
ERCC3-203ENST00000445889 KIF15Q9NS87 1388 aa18.99■□□□□ 0.63
ERCC3-203ENST00000445889 PLEKHD1A6NEE1 506 aa18.99■□□□□ 0.63
ERCC3-203ENST00000445889 MBD5Q9P267 1494 aa18.99■□□□□ 0.63
ERCC3-203ENST00000445889 RTL5Q5HYW3 569 aaPredicted RBP18.99■□□□□ 0.63
ERCC3-203ENST00000445889 KIAA0586Q9BVV6 1533 aa18.98■□□□□ 0.63
ERCC3-203ENST00000445889 ROCK2O75116 1388 aaKnown RBP18.98■□□□□ 0.63
ERCC3-203ENST00000445889 POLR1AO95602 1720 aaPredicted RBP18.97■□□□□ 0.63
ERCC3-203ENST00000445889 JPH4Q96JJ6 628 aa18.97■□□□□ 0.63
ERCC3-203ENST00000445889 KIAA0556O60303 1618 aa18.96■□□□□ 0.63
ERCC3-203ENST00000445889 KIF14Q15058 1648 aa18.95■□□□□ 0.62
ERCC3-203ENST00000445889 PDE4AP27815 886 aa18.94■□□□□ 0.62
ERCC3-203ENST00000445889 RALBP1Q15311 655 aa18.94■□□□□ 0.62
ERCC3-203ENST00000445889 KDM5CP41229 1560 aa18.94■□□□□ 0.62
ERCC3-203ENST00000445889 RAPGEF6Q8TEU7 1601 aa18.94■□□□□ 0.62
ERCC3-203ENST00000445889 LRPPRCP42704 1394 aaKnown RBP18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms