RNA–Protein interactions for RNA: ENST00000445866.6

SGCE-206, Transcript of sarcoglycan epsilon, humanhuman

TSL 5 BASIC

Gene SGCE, Length 1,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-206ENST00000445866 FANCAO15360 1455 aa26.51■■□□□ 1.83
SGCE-206ENST00000445866 AKNAQ7Z591 1439 aa26.48■■□□□ 1.83
SGCE-206ENST00000445866 ITGAEP38570 1179 aa26.47■■□□□ 1.83
SGCE-206ENST00000445866 RRBP1Q9P2E9 1410 aaKnown RBP26.46■■□□□ 1.83
SGCE-206ENST00000445866 TRIM26Q12899 539 aaPredicted RBP26.46■■□□□ 1.83
SGCE-206ENST00000445866 ARAP3Q8WWN8 1544 aa26.46■■□□□ 1.83
SGCE-206ENST00000445866 TEX14Q8IWB6 1497 aa26.45■■□□□ 1.82
SGCE-206ENST00000445866 MAP3K4Q9Y6R4 1608 aa26.45■■□□□ 1.82
SGCE-206ENST00000445866 RSPH4AQ5TD94 716 aa26.43■■□□□ 1.82
SGCE-206ENST00000445866 SCAPERQ9BY12 1400 aa26.43■■□□□ 1.82
SGCE-206ENST00000445866 NEO1Q92859 1461 aa26.42■■□□□ 1.82
SGCE-206ENST00000445866 AFAP1Q8N556 730 aa26.41■■□□□ 1.82
SGCE-206ENST00000445866 KIAA1107Q9UPP5 1409 aa26.41■■□□□ 1.82
SGCE-206ENST00000445866 RAPGEF3O95398 923 aa26.4■■□□□ 1.82
SGCE-206ENST00000445866 PREX2Q70Z35 1606 aa26.39■■□□□ 1.82
SGCE-206ENST00000445866 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.39■■□□□ 1.82
SGCE-206ENST00000445866 TSPY4P0CV99 314 aa26.39■■□□□ 1.82
SGCE-206ENST00000445866 TSPY10P0CW01 314 aa26.39■■□□□ 1.82
SGCE-206ENST00000445866 CAMSAP2Q08AD1 1489 aa26.39■■□□□ 1.81
SGCE-206ENST00000445866 PLEKHH2Q8IVE3 1493 aa26.39■■□□□ 1.81
SGCE-206ENST00000445866 ADGRL1O94910 1474 aa26.38■■□□□ 1.81
SGCE-206ENST00000445866 TCOF1Q13428 1488 aaKnown RBP26.38■■□□□ 1.81
SGCE-206ENST00000445866 KIF13AQ9H1H9 1805 aa26.38■■□□□ 1.81
SGCE-206ENST00000445866 CDC42BPAQ5VT25 1732 aa26.38■■□□□ 1.81
SGCE-206ENST00000445866 MYO5CQ9NQX4 1742 aa26.38■■□□□ 1.81
SGCE-206ENST00000445866 ITSN2Q9NZM3 1697 aa26.36■■□□□ 1.81
SGCE-206ENST00000445866 CDC42BPBQ9Y5S2 1711 aa26.35■■□□□ 1.81
SGCE-206ENST00000445866 CHIC2Q9UKJ5 165 aa26.34■■□□□ 1.81
SGCE-206ENST00000445866 PTPN23Q9H3S7 1636 aa26.34■■□□□ 1.81
SGCE-206ENST00000445866 MYT1LQ9UL68 1186 aa26.34■■□□□ 1.81
SGCE-206ENST00000445866 ARHGEF12Q9NZN5 1544 aa26.33■■□□□ 1.81
SGCE-206ENST00000445866 MBD5Q9P267 1494 aa26.33■■□□□ 1.81
SGCE-206ENST00000445866 TRAPPC8Q9Y2L5 1435 aa26.32■■□□□ 1.8
SGCE-206ENST00000445866 SAMD9LQ8IVG5 1584 aa26.32■■□□□ 1.8
SGCE-206ENST00000445866 DENND4BO75064 1496 aaPredicted RBP26.31■■□□□ 1.8
SGCE-206ENST00000445866 ABCC5O15440 1437 aa26.3■■□□□ 1.8
SGCE-206ENST00000445866 SPAG9O60271 1321 aaKnown RBP26.3■■□□□ 1.8
SGCE-206ENST00000445866 TSPOAP1O95153 1857 aa26.29■■□□□ 1.8
SGCE-206ENST00000445866 SYCP2Q9BX26 1530 aa26.27■■□□□ 1.8
SGCE-206ENST00000445866 COL17A1Q9UMD9 1497 aaPredicted RBP26.26■■□□□ 1.79
SGCE-206ENST00000445866 DAPK1P53355 1430 aa26.26■■□□□ 1.79
SGCE-206ENST00000445866 PCGF6Q9BYE7 350 aa26.25■■□□□ 1.79
SGCE-206ENST00000445866 PPRC1Q5VV67 1664 aaKnown RBP26.25■■□□□ 1.79
SGCE-206ENST00000445866 ABCC1P33527 1531 aa26.25■■□□□ 1.79
SGCE-206ENST00000445866 CFAP74Q9C0B2 1584 aa26.25■■□□□ 1.79
SGCE-206ENST00000445866 PTPRKQ15262 1439 aa26.23■■□□□ 1.79
SGCE-206ENST00000445866 POGZQ7Z3K3 1410 aa26.23■■□□□ 1.79
SGCE-206ENST00000445866 CCDC141Q6ZP82 1450 aa26.23■■□□□ 1.79
SGCE-206ENST00000445866 ZNF518AQ6AHZ1 1483 aa26.21■■□□□ 1.79
SGCE-206ENST00000445866 RRP7BPQ9NSQ0 103 aa26.21■■□□□ 1.79
SGCE-206ENST00000445866 C9orf84Q5VXU9 1444 aa26.17■■□□□ 1.78
SGCE-206ENST00000445866 ARHGEF5Q12774 1597 aa26.16■■□□□ 1.78
SGCE-206ENST00000445866 ANKRD30AQ9BXX3 1397 aa26.14■■□□□ 1.78
SGCE-206ENST00000445866 RTEL1-TNFRSF6BF6WH68 1400 aa26.13■■□□□ 1.77
SGCE-206ENST00000445866 NCOA1Q15788 1441 aa26.11■■□□□ 1.77
SGCE-206ENST00000445866 DNMT1P26358 1616 aaKnown RBP26.1■■□□□ 1.77
SGCE-206ENST00000445866 MLH3Q9UHC1 1453 aa26.1■■□□□ 1.77
SGCE-206ENST00000445866 ROCK1Q13464 1354 aa26.09■■□□□ 1.77
SGCE-206ENST00000445866 SHANK2Q9UPX8 1470 aa26.08■■□□□ 1.77
SGCE-206ENST00000445866 KIF15Q9NS87 1388 aa26.06■■□□□ 1.76
SGCE-206ENST00000445866 MAGI2Q86UL8 1455 aa26.05■■□□□ 1.76
SGCE-206ENST00000445866 KDM6BO15054 1643 aa26.05■■□□□ 1.76
SGCE-206ENST00000445866 YEATS2Q9ULM3 1422 aa26.04■■□□□ 1.76
SGCE-206ENST00000445866 KDM5CP41229 1560 aa26.03■■□□□ 1.76
SGCE-206ENST00000445866 ADGRL2O95490 1459 aa26.02■■□□□ 1.76
SGCE-206ENST00000445866 FRMPD1Q5SYB0 1578 aa26.01■■□□□ 1.75
SGCE-206ENST00000445866 ATP7AQ04656 1500 aa26■■□□□ 1.75
SGCE-206ENST00000445866 DHX29Q7Z478 1369 aaKnown RBP26■■□□□ 1.75
SGCE-206ENST00000445866 MAST1Q9Y2H9 1570 aa25.98■■□□□ 1.75
SGCE-206ENST00000445866 RICTORQ6R327 1708 aa25.98■■□□□ 1.75
SGCE-206ENST00000445866 NAIPQ13075 1403 aa25.98■■□□□ 1.75
SGCE-206ENST00000445866 ZMYM4Q5VZL5 1548 aa25.97■■□□□ 1.75
SGCE-206ENST00000445866 ZFYVE16Q7Z3T8 1539 aa25.97■■□□□ 1.75
SGCE-206ENST00000445866 HFM1A2PYH4 1435 aa25.97■■□□□ 1.75
SGCE-206ENST00000445866 SETD5Q9C0A6 1442 aa25.97■■□□□ 1.75
SGCE-206ENST00000445866 ATP10AO60312 1499 aa25.96■■□□□ 1.75
SGCE-206ENST00000445866 KIF3BO15066 747 aa25.96■■□□□ 1.75
SGCE-206ENST00000445866 ANKRD50Q9ULJ7 1429 aa25.95■■□□□ 1.74
SGCE-206ENST00000445866 HECW2Q9P2P5 1572 aa25.94■■□□□ 1.74
SGCE-206ENST00000445866 ARID4BQ4LE39 1312 aaPredicted RBP25.94■■□□□ 1.74
SGCE-206ENST00000445866 A2MP01023 1474 aa25.92■■□□□ 1.74
SGCE-206ENST00000445866 INO80Q9ULG1 1556 aaPredicted RBP25.91■■□□□ 1.74
SGCE-206ENST00000445866 HRCP23327 699 aa25.9■■□□□ 1.74
SGCE-206ENST00000445866 TRIM52Q96A61 297 aa25.9■■□□□ 1.74
SGCE-206ENST00000445866 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.9■■□□□ 1.74
SGCE-206ENST00000445866 KIDINS220Q9ULH0 1771 aa25.89■■□□□ 1.74
SGCE-206ENST00000445866 GGT6Q6P531 493 aa25.89■■□□□ 1.73
SGCE-206ENST00000445866 RAB3GAP2Q9H2M9 1393 aa25.88■■□□□ 1.73
SGCE-206ENST00000445866 DUOX2Q9NRD8 1548 aa25.88■■□□□ 1.73
SGCE-206ENST00000445866 CROCC2H7BZ55 1655 aa25.88■■□□□ 1.73
SGCE-206ENST00000445866 MLECQ14165 292 aa25.85■■□□□ 1.73
SGCE-206ENST00000445866 PLXNC1O60486 1568 aa25.85■■□□□ 1.73
SGCE-206ENST00000445866 ERBINQ96RT1 1412 aa25.85■■□□□ 1.73
SGCE-206ENST00000445866 DIP2CQ9Y2E4 1556 aa25.84■■□□□ 1.73
SGCE-206ENST00000445866 ABCA6Q8N139 1617 aa25.81■■□□□ 1.72
SGCE-206ENST00000445866 ACIN1Q9UKV3 1341 aaKnown RBP25.81■■□□□ 1.72
SGCE-206ENST00000445866 ARHGEF40Q8TER5 1519 aa25.79■■□□□ 1.72
SGCE-206ENST00000445866 NUP155O75694 1391 aa25.78■■□□□ 1.72
SGCE-206ENST00000445866 ADGBQ8N7X0 1667 aa25.78■■□□□ 1.72
SGCE-206ENST00000445866 WASHC2CQ9Y4E1 1318 aa25.74■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms