RNA–Protein interactions for RNA: ENST00000445561.5

TRO-215, Transcript of trophinin, humanhuman

TSL 1 (best)

Gene TRO, Length 2,597 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRO-215ENST00000445561 EIF4G3O43432 1585 aaKnown RBP17.64■□□□□ 0.41
TRO-215ENST00000445561 EIF4G2P78344 907 aaKnown RBP eCLIP17.63■□□□□ 0.41
TRO-215ENST00000445561 RAPGEF6Q8TEU7 1601 aa17.63■□□□□ 0.41
TRO-215ENST00000445561 CDK11AQ9UQ88 783 aaPredicted RBP17.62■□□□□ 0.41
TRO-215ENST00000445561 ROCK1Q13464 1354 aa17.62■□□□□ 0.41
TRO-215ENST00000445561 PRG4Q92954 1404 aaPredicted RBP17.61■□□□□ 0.41
TRO-215ENST00000445561 FBLN2P98095 1184 aa17.61■□□□□ 0.41
TRO-215ENST00000445561 DNMT1P26358 1616 aaKnown RBP17.6■□□□□ 0.41
TRO-215ENST00000445561 CHMP7Q8WUX9 453 aaPredicted RBP17.6■□□□□ 0.41
TRO-215ENST00000445561 SLC4A1APQ9BWU0 796 aaKnown RBP17.6■□□□□ 0.41
TRO-215ENST00000445561 ANKRD30BQ9BXX2 1392 aa17.6■□□□□ 0.41
TRO-215ENST00000445561 C11orf95C9JLR9 678 aaPredicted RBP17.59■□□□□ 0.41
TRO-215ENST00000445561 PLB1Q6P1J6 1458 aa17.59■□□□□ 0.41
TRO-215ENST00000445561 NBPF8Q3BBV2 869 aa17.58■□□□□ 0.41
TRO-215ENST00000445561 NEFLP07196 543 aa17.58■□□□□ 0.4
TRO-215ENST00000445561 CFDP1Q9UEE9 299 aaPredicted RBP17.57■□□□□ 0.4
TRO-215ENST00000445561 ZNF777Q9ULD5 760 aaPredicted RBP17.57■□□□□ 0.4
TRO-215ENST00000445561 ERCC6Q03468 1493 aa17.57■□□□□ 0.4
TRO-215ENST00000445561 HNRNPUQ00839 825 aaKnown RBP eCLIP17.56■□□□□ 0.4
TRO-215ENST00000445561 RPRD2Q5VT52 1461 aaKnown RBP17.56■□□□□ 0.4
TRO-215ENST00000445561 TROQ12816 1431 aaPredicted RBP17.55■□□□□ 0.4
TRO-215ENST00000445561 CEP170Q5SW79 1584 aa17.55■□□□□ 0.4
TRO-215ENST00000445561 CAMSAP2Q08AD1 1489 aa17.54■□□□□ 0.4
TRO-215ENST00000445561 TEX14Q8IWB6 1497 aa17.53■□□□□ 0.4
TRO-215ENST00000445561 MAGI1Q96QZ7 1491 aaPredicted RBP17.52■□□□□ 0.4
TRO-215ENST00000445561 CCDC184Q52MB2 194 aa17.52■□□□□ 0.39
TRO-215ENST00000445561 CNTLNQ9NXG0 1405 aa17.52■□□□□ 0.39
TRO-215ENST00000445561 SYNJ2O15056 1496 aa17.51■□□□□ 0.39
TRO-215ENST00000445561 GPATCH8Q9UKJ3 1502 aaKnown RBP17.51■□□□□ 0.39
TRO-215ENST00000445561 KIF14Q15058 1648 aa17.51■□□□□ 0.39
TRO-215ENST00000445561 CCDC7Q96M83 1385 aa17.51■□□□□ 0.39
TRO-215ENST00000445561 NCOA1Q15788 1441 aa17.5■□□□□ 0.39
TRO-215ENST00000445561 JPH4Q96JJ6 628 aa17.5■□□□□ 0.39
TRO-215ENST00000445561 PZPP20742 1482 aa17.49■□□□□ 0.39
TRO-215ENST00000445561 CARMIL2Q6F5E8 1435 aa17.46■□□□□ 0.39
TRO-215ENST00000445561 PRKRIP1Q9H875 184 aaPredicted RBP17.45■□□□□ 0.38
TRO-215ENST00000445561 KIF7Q2M1P5 1343 aa17.45■□□□□ 0.38
TRO-215ENST00000445561 ITSN2Q9NZM3 1697 aa17.45■□□□□ 0.38
TRO-215ENST00000445561 SPATA31E1Q6ZUB1 1445 aa17.44■□□□□ 0.38
TRO-215ENST00000445561 ZNF326Q5BKZ1 582 aaKnown RBP17.44■□□□□ 0.38
TRO-215ENST00000445561 IRX6P78412 446 aaPredicted RBP17.43■□□□□ 0.38
TRO-215ENST00000445561 MYT1Q01538 1121 aa17.43■□□□□ 0.38
TRO-215ENST00000445561 PKD2Q13563 968 aa17.43■□□□□ 0.38
TRO-215ENST00000445561 NUP160Q12769 1436 aa17.43■□□□□ 0.38
TRO-215ENST00000445561 FAM9BQ8IZU0 186 aa17.42■□□□□ 0.38
TRO-215ENST00000445561 PLEKHD1A6NEE1 506 aa17.41■□□□□ 0.38
TRO-215ENST00000445561 ADCY10Q96PN6 1610 aa17.41■□□□□ 0.38
TRO-215ENST00000445561 KIAA1107Q9UPP5 1409 aa17.41■□□□□ 0.38
TRO-215ENST00000445561 ANKRD30AQ9BXX3 1397 aa17.41■□□□□ 0.38
TRO-215ENST00000445561 ADGBQ8N7X0 1667 aa17.41■□□□□ 0.38
TRO-215ENST00000445561 ADGRL2O95490 1459 aa17.41■□□□□ 0.38
TRO-215ENST00000445561 MRS2Q9HD23 443 aa17.4■□□□□ 0.38
TRO-215ENST00000445561 ANKRD50Q9ULJ7 1429 aa17.39■□□□□ 0.37
TRO-215ENST00000445561 CNGB1Q14028 1251 aaPredicted RBP17.39■□□□□ 0.37
TRO-215ENST00000445561 CROCC2H7BZ55 1655 aa17.39■□□□□ 0.37
TRO-215ENST00000445561 POLR3GLQ9BT43 218 aa17.37■□□□□ 0.37
TRO-215ENST00000445561 ATP10BO94823 1461 aa17.37■□□□□ 0.37
TRO-215ENST00000445561 MBD5Q9P267 1494 aa17.36■□□□□ 0.37
TRO-215ENST00000445561 ABCA8O94911 1581 aa17.35■□□□□ 0.37
TRO-215ENST00000445561 NUP155O75694 1391 aa17.35■□□□□ 0.37
TRO-215ENST00000445561 C9orf84Q5VXU9 1444 aa17.35■□□□□ 0.37
TRO-215ENST00000445561 CDC42BPAQ5VT25 1732 aa17.34■□□□□ 0.37
TRO-215ENST00000445561 ABCC10Q5T3U5 1492 aa17.34■□□□□ 0.37
TRO-215ENST00000445561 USP47Q96K76 1375 aa17.34■□□□□ 0.37
TRO-215ENST00000445561 HNRNPMP52272 730 aaKnown RBP eCLIP17.34■□□□□ 0.37
TRO-215ENST00000445561 TSPY4P0CV99 314 aa17.32■□□□□ 0.36
TRO-215ENST00000445561 TSPY10P0CW01 314 aa17.32■□□□□ 0.36
TRO-215ENST00000445561 RBM19Q9Y4C8 960 aaKnown RBP17.32■□□□□ 0.36
TRO-215ENST00000445561 POLR1AO95602 1720 aaPredicted RBP17.3■□□□□ 0.36
TRO-215ENST00000445561 BCORL1Q5H9F3 1711 aa17.3■□□□□ 0.36
TRO-215ENST00000445561 KDM2AQ9Y2K7 1162 aa17.29■□□□□ 0.36
TRO-215ENST00000445561 DHX29Q7Z478 1369 aaKnown RBP17.28■□□□□ 0.36
TRO-215ENST00000445561 SHANK2Q9UPX8 1470 aa17.28■□□□□ 0.36
TRO-215ENST00000445561 KIF15Q9NS87 1388 aa17.28■□□□□ 0.36
TRO-215ENST00000445561 ZBED9Q6R2W3 1325 aa17.28■□□□□ 0.36
TRO-215ENST00000445561 PTPRGP23470 1445 aa17.26■□□□□ 0.35
TRO-215ENST00000445561 CARD11Q9BXL7 1154 aa17.26■□□□□ 0.35
TRO-215ENST00000445561 KDM5CP41229 1560 aa17.25■□□□□ 0.35
TRO-215ENST00000445561 DCAF11Q8TEB1 546 aa17.24■□□□□ 0.35
TRO-215ENST00000445561 SENP3-EIF4A1A0A087X0R7 540 aa17.23■□□□□ 0.35
TRO-215ENST00000445561 UHRF1BP1Q6BDS2 1440 aa17.22■□□□□ 0.35
TRO-215ENST00000445561 RALGAPBQ86X10 1494 aa17.22■□□□□ 0.35
TRO-215ENST00000445561 ANP32EQ9BTT0 268 aa17.21■□□□□ 0.35
TRO-215ENST00000445561 ST20-MTHFSA0A0A6YYL1 179 aa17.2■□□□□ 0.34
TRO-215ENST00000445561 KDM5DQ9BY66 1539 aa17.2■□□□□ 0.34
TRO-215ENST00000445561 SAMD9LQ8IVG5 1584 aa17.19■□□□□ 0.34
TRO-215ENST00000445561 CCDC141Q6ZP82 1450 aa17.18■□□□□ 0.34
TRO-215ENST00000445561 ARHGEF5Q12774 1597 aa17.18■□□□□ 0.34
TRO-215ENST00000445561 PPP4R2Q9NY27 417 aa17.18■□□□□ 0.34
TRO-215ENST00000445561 ARHGEF12Q9NZN5 1544 aa17.18■□□□□ 0.34
TRO-215ENST00000445561 ARID4BQ4LE39 1312 aaPredicted RBP17.17■□□□□ 0.34
TRO-215ENST00000445561 CDC42BPBQ9Y5S2 1711 aa17.17■□□□□ 0.34
TRO-215ENST00000445561 B4GALNT3Q6L9W6 998 aa17.16■□□□□ 0.34
TRO-215ENST00000445561 FAM135AQ9P2D6 1515 aa17.16■□□□□ 0.34
TRO-215ENST00000445561 ERICH6BQ5W0A0 696 aa17.15■□□□□ 0.34
TRO-215ENST00000445561 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.15■□□□□ 0.343e-7■■■■□ 21.1
TRO-215ENST00000445561 ROCK2O75116 1388 aaKnown RBP17.14■□□□□ 0.34
TRO-215ENST00000445561 RGL3Q3MIN7 710 aa17.14■□□□□ 0.33
TRO-215ENST00000445561 PREX2Q70Z35 1606 aa17.14■□□□□ 0.33
TRO-215ENST00000445561 SYCP2Q9BX26 1530 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms