RNA–Protein interactions for RNA: ENST00000444719.5

LMBR1-211, Transcript of limb development membrane protein 1, humanhuman

TSL 3

Gene LMBR1, Length 762 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-211ENST00000444719 CDC42BPBQ9Y5S2 1711 aa35.69■■■■□ 3.3
LMBR1-211ENST00000444719 PREX2Q70Z35 1606 aa35.61■■■■□ 3.29
LMBR1-211ENST00000444719 CDC42BPAQ5VT25 1732 aa35.61■■■■□ 3.29
LMBR1-211ENST00000444719 POGZQ7Z3K3 1410 aa35.59■■■■□ 3.29
LMBR1-211ENST00000444719 MTUS2Q5JR59 1369 aa35.58■■■■□ 3.29
LMBR1-211ENST00000444719 ZMYM4Q5VZL5 1548 aa35.57■■■■□ 3.29
LMBR1-211ENST00000444719 ARHGEF40Q8TER5 1519 aa35.57■■■■□ 3.29
LMBR1-211ENST00000444719 ARID4BQ4LE39 1312 aaPredicted RBP35.56■■■■□ 3.28
LMBR1-211ENST00000444719 YEATS2Q9ULM3 1422 aa35.53■■■■□ 3.28
LMBR1-211ENST00000444719 ZFYVE16Q7Z3T8 1539 aa35.52■■■■□ 3.28
LMBR1-211ENST00000444719 AFAP1Q8N556 730 aa35.51■■■■□ 3.28
LMBR1-211ENST00000444719 ZNF777Q9ULD5 760 aaPredicted RBP35.49■■■■□ 3.27
LMBR1-211ENST00000444719 MAGI2Q86UL8 1455 aa35.48■■■■□ 3.27
LMBR1-211ENST00000444719 GPATCH8Q9UKJ3 1502 aaKnown RBP35.47■■■■□ 3.27
LMBR1-211ENST00000444719 VPS8Q8N3P4 1428 aa35.46■■■■□ 3.27
LMBR1-211ENST00000444719 ZNF518AQ6AHZ1 1483 aa35.46■■■■□ 3.27
LMBR1-211ENST00000444719 BCORL1Q5H9F3 1711 aa35.44■■■■□ 3.26
LMBR1-211ENST00000444719 MYT1LQ9UL68 1186 aa35.44■■■■□ 3.26
LMBR1-211ENST00000444719 ABCC1P33527 1531 aa35.43■■■■□ 3.26
LMBR1-211ENST00000444719 CCNB3Q8WWL7 1395 aa35.43■■■■□ 3.26
LMBR1-211ENST00000444719 ADAMTSL3P82987 1691 aa35.43■■■■□ 3.26
LMBR1-211ENST00000444719 EHBP1L1Q8N3D4 1523 aa35.42■■■■□ 3.26
LMBR1-211ENST00000444719 ARHGEF12Q9NZN5 1544 aa35.42■■■■□ 3.26
LMBR1-211ENST00000444719 SIGLEC1Q9BZZ2 1709 aa35.42■■■■□ 3.26
LMBR1-211ENST00000444719 ITSN2Q9NZM3 1697 aa35.42■■■■□ 3.26
LMBR1-211ENST00000444719 TRAPPC8Q9Y2L5 1435 aa35.4■■■■□ 3.26
LMBR1-211ENST00000444719 KDM5CP41229 1560 aa35.39■■■■□ 3.26
LMBR1-211ENST00000444719 CFDP1Q9UEE9 299 aaPredicted RBP35.39■■■■□ 3.26
LMBR1-211ENST00000444719 SAMD9LQ8IVG5 1584 aa35.38■■■■□ 3.25
LMBR1-211ENST00000444719 TIAM1Q13009 1591 aa35.37■■■■□ 3.25
LMBR1-211ENST00000444719 ATP10AO60312 1499 aa35.35■■■■□ 3.25
LMBR1-211ENST00000444719 HECW2Q9P2P5 1572 aa35.34■■■■□ 3.25
LMBR1-211ENST00000444719 MADDQ8WXG6 1647 aa35.33■■■■□ 3.25
LMBR1-211ENST00000444719 HNRNPMP52272 730 aaKnown RBP eCLIP35.32■■■■□ 3.242e-6■■■□□ 18.8
LMBR1-211ENST00000444719 MLECQ14165 292 aa35.31■■■■□ 3.24
LMBR1-211ENST00000444719 SYCP2Q9BX26 1530 aa35.31■■■■□ 3.24
LMBR1-211ENST00000444719 SUPT6HQ7KZ85 1726 aaKnown RBP35.29■■■■□ 3.24
LMBR1-211ENST00000444719 C9orf84Q5VXU9 1444 aa35.29■■■■□ 3.24
LMBR1-211ENST00000444719 PTPRMP28827 1452 aa35.28■■■■□ 3.24
LMBR1-211ENST00000444719 MLH3Q9UHC1 1453 aa35.27■■■■□ 3.24
LMBR1-211ENST00000444719 DIP2CQ9Y2E4 1556 aa35.25■■■■□ 3.23
LMBR1-211ENST00000444719 RIMS1Q86UR5 1692 aaKnown RBP35.25■■■■□ 3.23
LMBR1-211ENST00000444719 ABCA6Q8N139 1617 aa35.24■■■■□ 3.23
LMBR1-211ENST00000444719 NCOA2Q15596 1464 aa35.24■■■■□ 3.23
LMBR1-211ENST00000444719 ZNF644Q9H582 1327 aaPredicted RBP35.24■■■■□ 3.23
LMBR1-211ENST00000444719 KIDINS220Q9ULH0 1771 aa35.23■■■■□ 3.23
LMBR1-211ENST00000444719 LRRC9Q6ZRR7 1453 aa35.22■■■■□ 3.23
LMBR1-211ENST00000444719 PLEKHH2Q8IVE3 1493 aa35.22■■■■□ 3.23
LMBR1-211ENST00000444719 KIAA1107Q9UPP5 1409 aa35.2■■■■□ 3.23
LMBR1-211ENST00000444719 KANK4Q5T7N3 995 aaPredicted RBP35.19■■■■□ 3.22
LMBR1-211ENST00000444719 PLPPR3Q6T4P5 718 aa35.17■■■■□ 3.22
LMBR1-211ENST00000444719 FER1L4A9Z1Z3 1794 aa35.16■■■■□ 3.22
LMBR1-211ENST00000444719 SPAG9O60271 1321 aaKnown RBP35.16■■■■□ 3.22
LMBR1-211ENST00000444719 MAP3K1Q13233 1512 aa35.15■■■■□ 3.22
LMBR1-211ENST00000444719 REREQ9P2R6 1566 aa35.11■■■■□ 3.21
LMBR1-211ENST00000444719 APLP2Q06481 763 aa35.1■■■■□ 3.21
LMBR1-211ENST00000444719 ATP7AQ04656 1500 aa35.07■■■■□ 3.21
LMBR1-211ENST00000444719 MBD5Q9P267 1494 aa35.06■■■■□ 3.2
LMBR1-211ENST00000444719 INO80Q9ULG1 1556 aaPredicted RBP35.04■■■■□ 3.2
LMBR1-211ENST00000444719 CAMSAP2Q08AD1 1489 aa35.04■■■■□ 3.2
LMBR1-211ENST00000444719 AGLP35573 1532 aa35.01■■■■□ 3.19
LMBR1-211ENST00000444719 CEBPAP49715 358 aaPredicted RBP34.94■■■■□ 3.18
LMBR1-211ENST00000444719 A2MP01023 1474 aa34.92■■■■□ 3.18
LMBR1-211ENST00000444719 CCDC141Q6ZP82 1450 aa34.92■■■■□ 3.18
LMBR1-211ENST00000444719 MYOM3Q5VTT5 1437 aa34.91■■■■□ 3.18
LMBR1-211ENST00000444719 ADGBQ8N7X0 1667 aa34.91■■■■□ 3.18
LMBR1-211ENST00000444719 ESF1Q9H501 851 aaKnown RBP34.9■■■■□ 3.18
LMBR1-211ENST00000444719 RSPH4AQ5TD94 716 aa34.89■■■■□ 3.18
LMBR1-211ENST00000444719 RTEL1-TNFRSF6BF6WH68 1400 aa34.88■■■■□ 3.17
LMBR1-211ENST00000444719 PLXNC1O60486 1568 aa34.87■■■■□ 3.17
LMBR1-211ENST00000444719 ARHGEF5Q12774 1597 aa34.86■■■■□ 3.17
LMBR1-211ENST00000444719 LMTK3Q96Q04 1460 aa34.84■■■■□ 3.17
LMBR1-211ENST00000444719 MIA2Q96PC5 1412 aa34.84■■■■□ 3.17
LMBR1-211ENST00000444719 TSPY4P0CV99 314 aa34.83■■■■□ 3.17
LMBR1-211ENST00000444719 TSPY10P0CW01 314 aa34.83■■■■□ 3.17
LMBR1-211ENST00000444719 C3P01024 1663 aa34.82■■■■□ 3.16
LMBR1-211ENST00000444719 GGT6Q6P531 493 aa34.8■■■■□ 3.16
LMBR1-211ENST00000444719 DHX29Q7Z478 1369 aaKnown RBP34.76■■■■□ 3.16
LMBR1-211ENST00000444719 HSPA2P54652 639 aa34.76■■■■□ 3.16
LMBR1-211ENST00000444719 PTPN23Q9H3S7 1636 aa34.73■■■■□ 3.15
LMBR1-211ENST00000444719 CNTLNQ9NXG0 1405 aa34.73■■■■□ 3.15
LMBR1-211ENST00000444719 CLTCQ00610 1675 aaKnown RBP34.73■■■■□ 3.15
LMBR1-211ENST00000444719 SETD1BQ9UPS6 1966 aaKnown RBP34.72■■■■□ 3.15
LMBR1-211ENST00000444719 PREX1Q8TCU6 1659 aa34.72■■■■□ 3.15
LMBR1-211ENST00000444719 KIF3BO15066 747 aa34.69■■■■□ 3.14
LMBR1-211ENST00000444719 MROH2AA6NES4 1674 aa34.68■■■■□ 3.14
LMBR1-211ENST00000444719 MAST1Q9Y2H9 1570 aa34.67■■■■□ 3.14
LMBR1-211ENST00000444719 FGD6Q6ZV73 1430 aa34.67■■■■□ 3.14
LMBR1-211ENST00000444719 ZMYM3Q14202 1370 aa34.66■■■■□ 3.14
LMBR1-211ENST00000444719 UHRF1BP1Q6BDS2 1440 aa34.6■■■■□ 3.13
LMBR1-211ENST00000444719 CROCC2H7BZ55 1655 aa34.6■■■■□ 3.13
LMBR1-211ENST00000444719 ABCC5O15440 1437 aa34.59■■■■□ 3.13
LMBR1-211ENST00000444719 PPP6R1Q9UPN7 881 aa34.59■■■■□ 3.13
LMBR1-211ENST00000444719 TCOF1Q13428 1488 aaKnown RBP34.58■■■■□ 3.13
LMBR1-211ENST00000444719 DNMT1P26358 1616 aaKnown RBP34.55■■■■□ 3.12
LMBR1-211ENST00000444719 PPARGC1BQ86YN6 1023 aaKnown RBP34.54■■■■□ 3.12
LMBR1-211ENST00000444719 DAPK1P53355 1430 aa34.54■■■■□ 3.12
LMBR1-211ENST00000444719 FAM50AQ14320 339 aaKnown RBP34.51■■■■□ 3.12
LMBR1-211ENST00000444719 NPATQ14207 1427 aa34.5■■■■□ 3.11
LMBR1-211ENST00000444719 RRP7BPQ9NSQ0 103 aa34.5■■■■□ 3.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms