RNA–Protein interactions for RNA: ENST00000444265.6

CASC15-201, Transcript of cancer susceptibility 15, humanhuman

TSL 1 (best) BASIC

Gene CASC15, Length 1,497 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC15-201ENST00000444265 MAGI2Q86UL8 1455 aa12.84□□□□□ -0.35
CASC15-201ENST00000444265 ZFYVE16Q7Z3T8 1539 aa12.84□□□□□ -0.35
CASC15-201ENST00000444265 ARHGEF12Q9NZN5 1544 aa12.84□□□□□ -0.35
CASC15-201ENST00000444265 KIF27Q86VH2 1401 aa12.84□□□□□ -0.35
CASC15-201ENST00000444265 TRAPPC8Q9Y2L5 1435 aa12.84□□□□□ -0.35
CASC15-201ENST00000444265 PPP6R1Q9UPN7 881 aa12.84□□□□□ -0.35
CASC15-201ENST00000444265 EFCAB5A4FU69 1503 aa12.84□□□□□ -0.35
CASC15-201ENST00000444265 PTPRKQ15262 1439 aa12.83□□□□□ -0.36
CASC15-201ENST00000444265 ABCA9Q8IUA7 1624 aa12.8□□□□□ -0.36
CASC15-201ENST00000444265 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.8□□□□□ -0.36
CASC15-201ENST00000444265 HNRNPUL2Q1KMD3 747 aaKnown RBP12.8□□□□□ -0.36
CASC15-201ENST00000444265 UGGT2Q9NYU1 1516 aa12.8□□□□□ -0.36
CASC15-201ENST00000444265 KIAA0556O60303 1618 aa12.8□□□□□ -0.36
CASC15-201ENST00000444265 ATP10AO60312 1499 aa12.79□□□□□ -0.36
CASC15-201ENST00000444265 CAMSAP1Q5T5Y3 1602 aa12.78□□□□□ -0.36
CASC15-201ENST00000444265 C9orf84Q5VXU9 1444 aa12.75□□□□□ -0.37
CASC15-201ENST00000444265 FOXD1Q16676 465 aa12.75□□□□□ -0.37
CASC15-201ENST00000444265 ABCA8O94911 1581 aa12.75□□□□□ -0.37
CASC15-201ENST00000444265 ZMYM4Q5VZL5 1548 aa12.74□□□□□ -0.37
CASC15-201ENST00000444265 ATP10BO94823 1461 aa12.73□□□□□ -0.37
CASC15-201ENST00000444265 SIGLEC1Q9BZZ2 1709 aa12.73□□□□□ -0.37
CASC15-201ENST00000444265 CPS1P31327 1500 aa12.73□□□□□ -0.37
CASC15-201ENST00000444265 MYT1LQ9UL68 1186 aa12.72□□□□□ -0.37
CASC15-201ENST00000444265 RICTORQ6R327 1708 aa12.72□□□□□ -0.37
CASC15-201ENST00000444265 GOLGA3Q08378 1498 aa12.71□□□□□ -0.37
CASC15-201ENST00000444265 IFFO2Q5TF58 517 aa12.71□□□□□ -0.38
CASC15-201ENST00000444265 PLA2R1Q13018 1463 aa12.68□□□□□ -0.38
CASC15-201ENST00000444265 HECW1Q76N89 1606 aa12.67□□□□□ -0.38
CASC15-201ENST00000444265 SHANK2Q9UPX8 1470 aa12.67□□□□□ -0.38
CASC15-201ENST00000444265 PLEKHD1A6NEE1 506 aa12.66□□□□□ -0.38
CASC15-201ENST00000444265 TRIM52Q96A61 297 aa12.66□□□□□ -0.38
CASC15-201ENST00000444265 SCAPERQ9BY12 1400 aa12.66□□□□□ -0.38
CASC15-201ENST00000444265 ZRANB1Q9UGI0 708 aa12.65□□□□□ -0.38
CASC15-201ENST00000444265 NPATQ14207 1427 aa12.65□□□□□ -0.39
CASC15-201ENST00000444265 CNTLNQ9NXG0 1405 aa12.65□□□□□ -0.39
CASC15-201ENST00000444265 RAPGEF2Q9Y4G8 1499 aa12.64□□□□□ -0.39
CASC15-201ENST00000444265 SETD1AO15047 1707 aaKnown RBP12.64□□□□□ -0.39
CASC15-201ENST00000444265 SRCAPQ6ZRS2 3230 aa12.64□□□□□ -0.39
CASC15-201ENST00000444265 CFAP74Q9C0B2 1584 aa12.64□□□□□ -0.39
CASC15-201ENST00000444265 TCOF1Q13428 1488 aaKnown RBP12.64□□□□□ -0.39
CASC15-201ENST00000444265 C3P01024 1663 aa12.63□□□□□ -0.39
CASC15-201ENST00000444265 RBM33Q96EV2 1170 aaKnown RBP12.62□□□□□ -0.39
CASC15-201ENST00000444265 ZNF772Q68DY9 489 aaPredicted RBP12.59□□□□□ -0.39
CASC15-201ENST00000444265 ZMYM3Q14202 1370 aa12.58□□□□□ -0.4
CASC15-201ENST00000444265 RXRBP28702 533 aa12.57□□□□□ -0.4
CASC15-201ENST00000444265 P3H3Q8IVL6 736 aa12.57□□□□□ -0.4
CASC15-201ENST00000444265 EFCAB2Q5VUJ9 269 aa12.56□□□□□ -0.4
CASC15-201ENST00000444265 ALKQ9UM73 1620 aa12.55□□□□□ -0.4
CASC15-201ENST00000444265 ANKLE2Q86XL3 938 aa12.54□□□□□ -0.4
CASC15-201ENST00000444265 AGLP35573 1532 aa12.54□□□□□ -0.4
CASC15-201ENST00000444265 AFAP1Q8N556 730 aa12.53□□□□□ -0.4
CASC15-201ENST00000444265 MEX3CQ5U5Q3 659 aaKnown RBP12.53□□□□□ -0.4
CASC15-201ENST00000444265 FAM135BQ49AJ0 1406 aa12.49□□□□□ -0.41
CASC15-201ENST00000444265 ZNF518AQ6AHZ1 1483 aa12.49□□□□□ -0.41
CASC15-201ENST00000444265 CEP170BQ9Y4F5 1589 aaPredicted RBP12.48□□□□□ -0.41
CASC15-201ENST00000444265 PLCH2O75038 1416 aa12.48□□□□□ -0.41
CASC15-201ENST00000444265 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.47□□□□□ -0.41
CASC15-201ENST00000444265 LRRC7Q96NW7 1537 aa12.46□□□□□ -0.41
CASC15-201ENST00000444265 NUTM2BA6NNL0 878 aaPredicted RBP12.46□□□□□ -0.42
CASC15-201ENST00000444265 NUTM2EB1AL46 878 aaPredicted RBP12.46□□□□□ -0.42
CASC15-201ENST00000444265 NUTM2DQ5VT03 806 aaPredicted RBP12.46□□□□□ -0.42
CASC15-201ENST00000444265 NUTM2AQ8IVF1 878 aaPredicted RBP12.46□□□□□ -0.42
CASC15-201ENST00000444265 SUPT6HQ7KZ85 1726 aaKnown RBP12.45□□□□□ -0.42
CASC15-201ENST00000444265 REREQ9P2R6 1566 aa12.44□□□□□ -0.42
CASC15-201ENST00000444265 A2ML1A8K2U0 1454 aa12.44□□□□□ -0.42
CASC15-201ENST00000444265 THEMISQ8N1K5 641 aaPredicted RBP12.44□□□□□ -0.42
CASC15-201ENST00000444265 RNF17Q9BXT8 1623 aaKnown RBP12.44□□□□□ -0.42
CASC15-201ENST00000444265 VWDEQ8N2E2 1590 aa12.43□□□□□ -0.42
CASC15-201ENST00000444265 JCADQ9P266 1359 aa12.43□□□□□ -0.42
CASC15-201ENST00000444265 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.42□□□□□ -0.42
CASC15-201ENST00000444265 ZNF142P52746 1687 aaPredicted RBP12.42□□□□□ -0.42
CASC15-201ENST00000444265 NPHP4O75161 1426 aaPredicted RBP12.42□□□□□ -0.42
CASC15-201ENST00000444265 CDK12Q9NYV4 1490 aaPredicted RBP12.42□□□□□ -0.42
CASC15-201ENST00000444265 MYO3AQ8NEV4 1616 aa12.41□□□□□ -0.42
CASC15-201ENST00000444265 DIP2CQ9Y2E4 1556 aa12.41□□□□□ -0.42
CASC15-201ENST00000444265 YY1P25490 414 aa12.4□□□□□ -0.42
CASC15-201ENST00000444265 SETBP1Q9Y6X0 1596 aa12.39□□□□□ -0.43
CASC15-201ENST00000444265 RAPGEF6Q8TEU7 1601 aa12.39□□□□□ -0.43
CASC15-201ENST00000444265 MLH3Q9UHC1 1453 aa12.39□□□□□ -0.43
CASC15-201ENST00000444265 SPATA31A6Q5VVP1 1343 aa12.39□□□□□ -0.43
CASC15-201ENST00000444265 SUPT5HO00267 1087 aaKnown RBP12.38□□□□□ -0.43
CASC15-201ENST00000444265 MROH2AA6NES4 1674 aa12.38□□□□□ -0.43
CASC15-201ENST00000444265 NUP153P49790 1475 aaKnown RBP12.37□□□□□ -0.43
CASC15-201ENST00000444265 NEURL4Q96JN8 1562 aa12.36□□□□□ -0.43
CASC15-201ENST00000444265 GGT6Q6P531 493 aa12.36□□□□□ -0.43
CASC15-201ENST00000444265 DNMT1P26358 1616 aaKnown RBP12.36□□□□□ -0.43
CASC15-201ENST00000444265 ATAD2Q6PL18 1390 aa12.35□□□□□ -0.43
CASC15-201ENST00000444265 KDM5CP41229 1560 aa12.35□□□□□ -0.43
CASC15-201ENST00000444265 CCDC125Q86Z20 511 aa12.34□□□□□ -0.43
CASC15-201ENST00000444265 MED14O60244 1454 aa12.34□□□□□ -0.43
CASC15-201ENST00000444265 RBM6P78332 1123 aaKnown RBP12.34□□□□□ -0.43
CASC15-201ENST00000444265 CTTNBP2Q8WZ74 1663 aa12.33□□□□□ -0.44
CASC15-201ENST00000444265 SYNMO15061 1565 aa12.33□□□□□ -0.44
CASC15-201ENST00000444265 POLR1AO95602 1720 aaPredicted RBP12.32□□□□□ -0.44
CASC15-201ENST00000444265 CDK13Q14004 1512 aaKnown RBP12.32□□□□□ -0.44
CASC15-201ENST00000444265 TNRQ92752 1358 aa12.31□□□□□ -0.44
CASC15-201ENST00000444265 ABCA6Q8N139 1617 aa12.31□□□□□ -0.44
CASC15-201ENST00000444265 NGLY1Q96IV0 654 aa12.31□□□□□ -0.44
CASC15-201ENST00000444265 QTRT2Q9H974 415 aaKnown RBP12.31□□□□□ -0.44
CASC15-201ENST00000444265 SENP3-EIF4A1A0A087X0R7 540 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms