RNA–Protein interactions for RNA: ENST00000444265.6

CASC15-201, Transcript of cancer susceptibility 15, humanhuman

TSL 1 (best) BASIC

Gene CASC15, Length 1,497 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC15-201ENST00000444265 NISCHQ9Y2I1 1504 aa18.62■□□□□ 0.57
CASC15-201ENST00000444265 ABCC9O60706 1549 aa18.37■□□□□ 0.53
CASC15-201ENST00000444265 DNAJC5BQ9UF47 199 aa18.28■□□□□ 0.52
CASC15-201ENST00000444265 DNAJC5Q9H3Z4 198 aa17.74■□□□□ 0.43
CASC15-201ENST00000444265 CCDC180Q9P1Z9 1646 aa17.08■□□□□ 0.33
CASC15-201ENST00000444265 PABPN1Q86U42 306 aaKnown RBP eCLIP17.03■□□□□ 0.32
CASC15-201ENST00000444265 RB1CC1Q8TDY2 1594 aa16.95■□□□□ 0.3
CASC15-201ENST00000444265 CECR2Q9BXF3 1484 aa16.7■□□□□ 0.26
CASC15-201ENST00000444265 NACADO15069 1562 aa16.55■□□□□ 0.24
CASC15-201ENST00000444265 TRIM41Q8WV44 630 aa16.53■□□□□ 0.24
CASC15-201ENST00000444265 DCAF8L2P0C7V8 631 aa16.51■□□□□ 0.23
CASC15-201ENST00000444265 CC2D2AQ9P2K1 1620 aa16.45■□□□□ 0.22
CASC15-201ENST00000444265 BICRAQ9NZM4 1560 aa16.37■□□□□ 0.21
CASC15-201ENST00000444265 CUX2O14529 1486 aa16.32■□□□□ 0.2
CASC15-201ENST00000444265 UNC13AQ9UPW8 1703 aa16.29■□□□□ 0.2
CASC15-201ENST00000444265 SHROOM4Q9ULL8 1493 aa16.15■□□□□ 0.18
CASC15-201ENST00000444265 EIF4G1Q04637 1599 aaKnown RBP16.14■□□□□ 0.17
CASC15-201ENST00000444265 ERCC6Q03468 1493 aa16.03■□□□□ 0.16
CASC15-201ENST00000444265 AEBP2Q6ZN18 517 aaPredicted RBP15.97■□□□□ 0.15
CASC15-201ENST00000444265 MYO15BQ96JP2 1530 aa15.93■□□□□ 0.14
CASC15-201ENST00000444265 SCRIBQ14160 1630 aa15.66■□□□□ 0.1
CASC15-201ENST00000444265 OSCARQ8IYS5 282 aa15.56■□□□□ 0.08
CASC15-201ENST00000444265 TRHP20396 242 aaPredicted RBP15.52■□□□□ 0.07
CASC15-201ENST00000444265 NESP48681 1621 aa15.4■□□□□ 0.06
CASC15-201ENST00000444265 ILDR1Q86SU0 546 aaPredicted RBP15.39■□□□□ 0.05
CASC15-201ENST00000444265 THOC2Q8NI27 1593 aaKnown RBP15.36■□□□□ 0.05
CASC15-201ENST00000444265 NCAPD3P42695 1498 aa15.33■□□□□ 0.05
CASC15-201ENST00000444265 DCAF1Q9Y4B6 1507 aa15.29■□□□□ 0.04
CASC15-201ENST00000444265 SMARCA2P51531 1590 aa15.26■□□□□ 0.03
CASC15-201ENST00000444265 CYB5RLQ6IPT4 315 aa15.26■□□□□ 0.03
CASC15-201ENST00000444265 BAZ1AQ9NRL2 1556 aaPredicted RBP15.25■□□□□ 0.03
CASC15-201ENST00000444265 RIMBP3CA6NJZ7 1639 aa15.21■□□□□ 0.02
CASC15-201ENST00000444265 RIMBP3BA6NNM3 1639 aa15.21■□□□□ 0.02
CASC15-201ENST00000444265 RIMBP3Q9UFD9 1639 aa15.21■□□□□ 0.02
CASC15-201ENST00000444265 PDS5BQ9NTI5 1447 aa15.21■□□□□ 0.02
CASC15-201ENST00000444265 ZCCHC6Q5VYS8 1495 aaKnown RBP15.13■□□□□ 0.01
CASC15-201ENST00000444265 LAMC3Q9Y6N6 1575 aa15.11■□□□□ 0.01
CASC15-201ENST00000444265 ATAD2BQ9ULI0 1458 aa15.1■□□□□ 0.01
CASC15-201ENST00000444265 ARHGEF11O15085 1522 aa15.1■□□□□ 0.01
CASC15-201ENST00000444265 MRC2Q9UBG0 1479 aa15.06■□□□□ 0
CASC15-201ENST00000444265 KIF21AQ7Z4S6 1674 aa15.03■□□□□ -0
CASC15-201ENST00000444265 HMGXB3Q12766 1538 aa15.02■□□□□ -0
CASC15-201ENST00000444265 WDR62O43379 1518 aa14.97□□□□□ -0.01
CASC15-201ENST00000444265 BAZ1BQ9UIG0 1483 aaKnown RBP14.92□□□□□ -0.02
CASC15-201ENST00000444265 CADPSQ9ULU8 1353 aa14.88□□□□□ -0.03
CASC15-201ENST00000444265 ARAP1Q96P48 1450 aa14.85□□□□□ -0.03
CASC15-201ENST00000444265 CEP164Q9UPV0 1460 aa14.76□□□□□ -0.05
CASC15-201ENST00000444265 RSF1Q96T23 1441 aaPredicted RBP14.71□□□□□ -0.05
CASC15-201ENST00000444265 SMARCA4P51532 1647 aa14.7□□□□□ -0.06
CASC15-201ENST00000444265 FBLN2P98095 1184 aa14.67□□□□□ -0.06
CASC15-201ENST00000444265 FANCD2Q9BXW9 1451 aa14.65□□□□□ -0.06
CASC15-201ENST00000444265 FBXO41Q8TF61 875 aa14.62□□□□□ -0.07
CASC15-201ENST00000444265 KDM4FA0A1W2PPD8 638 aa14.61□□□□□ -0.07
CASC15-201ENST00000444265 ZNF608Q9ULD9 1512 aaPredicted RBP14.56□□□□□ -0.08
CASC15-201ENST00000444265 PEG3Q9GZU2 1588 aa14.56□□□□□ -0.08
CASC15-201ENST00000444265 IFT140Q96RY7 1462 aa14.54□□□□□ -0.08
CASC15-201ENST00000444265 URB2Q14146 1524 aaKnown RBP14.53□□□□□ -0.08
CASC15-201ENST00000444265 LMTK3Q96Q04 1460 aa14.53□□□□□ -0.08
CASC15-201ENST00000444265 SOCS7O14512 581 aa14.52□□□□□ -0.08
CASC15-201ENST00000444265 ERCC6L2Q5T890 1561 aa14.41□□□□□ -0.1
CASC15-201ENST00000444265 CHD1O14646 1710 aa14.4□□□□□ -0.1
CASC15-201ENST00000444265 CFTRP13569 1480 aa14.38□□□□□ -0.11
CASC15-201ENST00000444265 CHMP7Q8WUX9 453 aaPredicted RBP14.36□□□□□ -0.11
CASC15-201ENST00000444265 AQRO60306 1485 aaKnown RBP eCLIP14.35□□□□□ -0.11
CASC15-201ENST00000444265 GAPVD1Q14C86 1478 aa14.35□□□□□ -0.11
CASC15-201ENST00000444265 EIF4G3O43432 1585 aaKnown RBP14.34□□□□□ -0.11
CASC15-201ENST00000444265 MROH2BQ7Z745 1585 aa14.32□□□□□ -0.12
CASC15-201ENST00000444265 ILDR2Q71H61 639 aa14.31□□□□□ -0.12
CASC15-201ENST00000444265 CLASP1Q7Z460 1538 aa14.27□□□□□ -0.12
CASC15-201ENST00000444265 FAM69CQ0P6D2 419 aa14.27□□□□□ -0.12
CASC15-201ENST00000444265 HECW2Q9P2P5 1572 aa14.27□□□□□ -0.13
CASC15-201ENST00000444265 DISP3Q9P2K9 1392 aa14.27□□□□□ -0.13
CASC15-201ENST00000444265 SYNJ1O43426 1573 aa14.25□□□□□ -0.13
CASC15-201ENST00000444265 SYNJ2O15056 1496 aa14.22□□□□□ -0.13
CASC15-201ENST00000444265 TOPBP1Q92547 1522 aa14.21□□□□□ -0.13
CASC15-201ENST00000444265 ABCC8Q09428 1581 aa14.19□□□□□ -0.14
CASC15-201ENST00000444265 ADGRL1O94910 1474 aa14.15□□□□□ -0.14
CASC15-201ENST00000444265 NPM1P06748 294 aaKnown RBP eCLIP14.14□□□□□ -0.15
CASC15-201ENST00000444265 KDM6BO15054 1643 aa14.13□□□□□ -0.15
CASC15-201ENST00000444265 TDRD9Q8NDG6 1382 aaKnown RBP14.13□□□□□ -0.15
CASC15-201ENST00000444265 SNAPC4Q5SXM2 1469 aa14.13□□□□□ -0.15
CASC15-201ENST00000444265 KIF13AQ9H1H9 1805 aa14.11□□□□□ -0.15
CASC15-201ENST00000444265 CHIC1Q5VXU3 224 aa14.09□□□□□ -0.15
CASC15-201ENST00000444265 ABCC10Q5T3U5 1492 aa14.08□□□□□ -0.16
CASC15-201ENST00000444265 TARBP1Q13395 1621 aaKnown RBP14.07□□□□□ -0.16
CASC15-201ENST00000444265 MAGI1Q96QZ7 1491 aaPredicted RBP14.06□□□□□ -0.16
CASC15-201ENST00000444265 DNMBPQ6XZF7 1577 aa14.02□□□□□ -0.16
CASC15-201ENST00000444265 WIZO95785 1651 aa14.02□□□□□ -0.17
CASC15-201ENST00000444265 SOGA1O94964 1423 aa14.01□□□□□ -0.17
CASC15-201ENST00000444265 POLA1P09884 1462 aaPredicted RBP13.98□□□□□ -0.17
CASC15-201ENST00000444265 GRIN2BQ13224 1484 aa13.98□□□□□ -0.17
CASC15-201ENST00000444265 RAD54L2Q9Y4B4 1467 aa13.98□□□□□ -0.17
CASC15-201ENST00000444265 PRDM2Q13029 1718 aa13.9□□□□□ -0.18
CASC15-201ENST00000444265 CERKQ8TCT0 537 aa13.9□□□□□ -0.18
CASC15-201ENST00000444265 DIP2BQ9P265 1576 aa13.9□□□□□ -0.18
CASC15-201ENST00000444265 WDR97A6NE52 1622 aa13.9□□□□□ -0.18
CASC15-201ENST00000444265 MAPKBP1O60336 1514 aa13.88□□□□□ -0.19
CASC15-201ENST00000444265 CEP170Q5SW79 1584 aa13.87□□□□□ -0.19
CASC15-201ENST00000444265 TSPOAP1O95153 1857 aa13.84□□□□□ -0.19
CASC15-201ENST00000444265 TOP2BQ02880 1626 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 95.9 ms