RNA–Protein interactions for RNA: ENST00000443621.1

LINC00393-201, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 282 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-201ENST00000443621 NAIPQ13075 1403 aa4.17□□□□□ -1.74
LINC00393-201ENST00000443621 CROCC2H7BZ55 1655 aa4.16□□□□□ -1.74
LINC00393-201ENST00000443621 DHX57Q6P158 1386 aaKnown RBP4.16□□□□□ -1.74
LINC00393-201ENST00000443621 RAB3GAP2Q9H2M9 1393 aa4.16□□□□□ -1.74
LINC00393-201ENST00000443621 MYO5CQ9NQX4 1742 aa4.16□□□□□ -1.74
LINC00393-201ENST00000443621 PLCH2O75038 1416 aa4.16□□□□□ -1.74
LINC00393-201ENST00000443621 DAPK1P53355 1430 aa4.16□□□□□ -1.74
LINC00393-201ENST00000443621 PPARGC1BQ86YN6 1023 aaKnown RBP4.16□□□□□ -1.74
LINC00393-201ENST00000443621 CFDP1Q9UEE9 299 aaPredicted RBP4.16□□□□□ -1.74
LINC00393-201ENST00000443621 ZCCHC11Q5TAX3 1644 aaKnown RBP4.16□□□□□ -1.74
LINC00393-201ENST00000443621 CDC42BPBQ9Y5S2 1711 aa4.15□□□□□ -1.74
LINC00393-201ENST00000443621 RTEL1-TNFRSF6BF6WH68 1400 aa4.15□□□□□ -1.74
LINC00393-201ENST00000443621 NCOA1Q15788 1441 aa4.15□□□□□ -1.74
LINC00393-201ENST00000443621 ABCA9Q8IUA7 1624 aa4.15□□□□□ -1.74
LINC00393-201ENST00000443621 CAMSAP2Q08AD1 1489 aa4.15□□□□□ -1.75
LINC00393-201ENST00000443621 MAPKBP1O60336 1514 aa4.15□□□□□ -1.75
LINC00393-201ENST00000443621 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP4.15□□□□□ -1.753e-7■■■■■ 59
LINC00393-201ENST00000443621 ANKRD30AQ9BXX3 1397 aa4.14□□□□□ -1.75
LINC00393-201ENST00000443621 PLXNC1O60486 1568 aa4.14□□□□□ -1.75
LINC00393-201ENST00000443621 CFAP74Q9C0B2 1584 aa4.14□□□□□ -1.75
LINC00393-201ENST00000443621 ABCC5O15440 1437 aa4.14□□□□□ -1.75
LINC00393-201ENST00000443621 CCDC141Q6ZP82 1450 aa4.14□□□□□ -1.75
LINC00393-201ENST00000443621 MBD5Q9P267 1494 aa4.14□□□□□ -1.75
LINC00393-201ENST00000443621 TSPY4P0CV99 314 aa4.14□□□□□ -1.75
LINC00393-201ENST00000443621 TSPY10P0CW01 314 aa4.14□□□□□ -1.75
LINC00393-201ENST00000443621 FAM50AQ14320 339 aaKnown RBP4.14□□□□□ -1.75
LINC00393-201ENST00000443621 HNRNPUL2Q1KMD3 747 aaKnown RBP4.14□□□□□ -1.75
LINC00393-201ENST00000443621 KDM5DQ9BY66 1539 aa4.14□□□□□ -1.75
LINC00393-201ENST00000443621 PTPRKQ15262 1439 aa4.13□□□□□ -1.75
LINC00393-201ENST00000443621 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP4.13□□□□□ -1.75
LINC00393-201ENST00000443621 EFCAB2Q5VUJ9 269 aa4.13□□□□□ -1.75
LINC00393-201ENST00000443621 GLI2P10070 1586 aa4.13□□□□□ -1.75
LINC00393-201ENST00000443621 ERCC6L2Q5T890 1561 aa4.13□□□□□ -1.75
LINC00393-201ENST00000443621 SAMD9LQ8IVG5 1584 aa4.12□□□□□ -1.75
LINC00393-201ENST00000443621 NPM1P06748 294 aaKnown RBP eCLIP4.12□□□□□ -1.75
LINC00393-201ENST00000443621 STAC3Q96MF2 364 aa4.12□□□□□ -1.75
LINC00393-201ENST00000443621 ERBINQ96RT1 1412 aa4.12□□□□□ -1.75
LINC00393-201ENST00000443621 ATP10AO60312 1499 aa4.11□□□□□ -1.75
LINC00393-201ENST00000443621 NEO1Q92859 1461 aa4.11□□□□□ -1.75
LINC00393-201ENST00000443621 ABCC1P33527 1531 aa4.11□□□□□ -1.75
LINC00393-201ENST00000443621 DUOX2Q9NRD8 1548 aa4.11□□□□□ -1.75
LINC00393-201ENST00000443621 TTC37Q6PGP7 1564 aa4.11□□□□□ -1.75
LINC00393-201ENST00000443621 EIF2AK4Q9P2K8 1649 aaKnown RBP4.11□□□□□ -1.75
LINC00393-201ENST00000443621 C9orf84Q5VXU9 1444 aa4.11□□□□□ -1.75
LINC00393-201ENST00000443621 ANKRD50Q9ULJ7 1429 aa4.11□□□□□ -1.75
LINC00393-201ENST00000443621 MAGI2Q86UL8 1455 aa4.11□□□□□ -1.75
LINC00393-201ENST00000443621 ARHGAP5Q13017 1502 aa4.11□□□□□ -1.75
LINC00393-201ENST00000443621 NEURL4Q96JN8 1562 aa4.1□□□□□ -1.75
LINC00393-201ENST00000443621 BCORL1Q5H9F3 1711 aa4.1□□□□□ -1.75
LINC00393-201ENST00000443621 ASXL2Q76L83 1435 aa4.1□□□□□ -1.75
LINC00393-201ENST00000443621 FAM135AQ9P2D6 1515 aa4.1□□□□□ -1.75
LINC00393-201ENST00000443621 UNC13BO14795 1591 aa4.1□□□□□ -1.75
LINC00393-201ENST00000443621 TTBK1Q5TCY1 1321 aaPredicted RBP4.09□□□□□ -1.75
LINC00393-201ENST00000443621 RPRD2Q5VT52 1461 aaKnown RBP4.09□□□□□ -1.75
LINC00393-201ENST00000443621 ZNF518AQ6AHZ1 1483 aa4.09□□□□□ -1.75
LINC00393-201ENST00000443621 TEX14Q8IWB6 1497 aa4.09□□□□□ -1.75
LINC00393-201ENST00000443621 MLH3Q9UHC1 1453 aa4.09□□□□□ -1.75
LINC00393-201ENST00000443621 KDM5CP41229 1560 aa4.09□□□□□ -1.75
LINC00393-201ENST00000443621 INO80Q9ULG1 1556 aaPredicted RBP4.09□□□□□ -1.75
LINC00393-201ENST00000443621 DEPDC5O75140 1603 aa4.09□□□□□ -1.76
LINC00393-201ENST00000443621 ZNF316A6NFI3 1004 aaPredicted RBP4.08□□□□□ -1.76
LINC00393-201ENST00000443621 FANCAO15360 1455 aa4.08□□□□□ -1.76
LINC00393-201ENST00000443621 PPP1R15AO75807 674 aaPredicted RBP4.08□□□□□ -1.76
LINC00393-201ENST00000443621 IQGAP3Q86VI3 1631 aa4.08□□□□□ -1.76
LINC00393-201ENST00000443621 MPHOSPH9Q99550 1183 aa4.08□□□□□ -1.76
LINC00393-201ENST00000443621 SYCP2Q9BX26 1530 aa4.08□□□□□ -1.76
LINC00393-201ENST00000443621 ANKRD30BQ9BXX2 1392 aa4.08□□□□□ -1.76
LINC00393-201ENST00000443621 KIF15Q9NS87 1388 aa4.08□□□□□ -1.76
LINC00393-201ENST00000443621 MAP3K4Q9Y6R4 1608 aa4.08□□□□□ -1.76
LINC00393-201ENST00000443621 ZFYVE16Q7Z3T8 1539 aa4.07□□□□□ -1.76
LINC00393-201ENST00000443621 ARHGEF12Q9NZN5 1544 aa4.07□□□□□ -1.76
LINC00393-201ENST00000443621 ZNF644Q9H582 1327 aaPredicted RBP4.07□□□□□ -1.76
LINC00393-201ENST00000443621 ITGAEP38570 1179 aa4.07□□□□□ -1.76
LINC00393-201ENST00000443621 PPP6R1Q9UPN7 881 aa4.07□□□□□ -1.76
LINC00393-201ENST00000443621 RIMBP3CA6NJZ7 1639 aa4.06□□□□□ -1.76
LINC00393-201ENST00000443621 RIMBP3BA6NNM3 1639 aa4.06□□□□□ -1.76
LINC00393-201ENST00000443621 RIMBP3Q9UFD9 1639 aa4.06□□□□□ -1.76
LINC00393-201ENST00000443621 VWDEQ8N2E2 1590 aa4.06□□□□□ -1.76
LINC00393-201ENST00000443621 REREQ9P2R6 1566 aa4.06□□□□□ -1.76
LINC00393-201ENST00000443621 ATP7AQ04656 1500 aa4.06□□□□□ -1.76
LINC00393-201ENST00000443621 LMTK2Q8IWU2 1503 aa4.06□□□□□ -1.76
LINC00393-201ENST00000443621 DENND4BO75064 1496 aaPredicted RBP4.06□□□□□ -1.76
LINC00393-201ENST00000443621 PZPP20742 1482 aa4.06□□□□□ -1.76
LINC00393-201ENST00000443621 UHRF1BP1Q6BDS2 1440 aa4.06□□□□□ -1.76
LINC00393-201ENST00000443621 CD109Q6YHK3 1445 aa4.06□□□□□ -1.76
LINC00393-201ENST00000443621 DHX29Q7Z478 1369 aaKnown RBP4.06□□□□□ -1.76
LINC00393-201ENST00000443621 TONSLQ96HA7 1378 aa4.06□□□□□ -1.76
LINC00393-201ENST00000443621 PRDM15P57071 1507 aaPredicted RBP4.05□□□□□ -1.76
LINC00393-201ENST00000443621 ZMYM4Q5VZL5 1548 aa4.05□□□□□ -1.76
LINC00393-201ENST00000443621 ADGRL1O94910 1474 aa4.05□□□□□ -1.76
LINC00393-201ENST00000443621 SPAG9O60271 1321 aaKnown RBP4.05□□□□□ -1.76
LINC00393-201ENST00000443621 ARID4BQ4LE39 1312 aaPredicted RBP4.05□□□□□ -1.76
LINC00393-201ENST00000443621 HNRNPMP52272 730 aaKnown RBP eCLIP4.05□□□□□ -1.76
LINC00393-201ENST00000443621 SLC4A1APQ9BWU0 796 aaKnown RBP4.05□□□□□ -1.76
LINC00393-201ENST00000443621 RRP7BPQ9NSQ0 103 aa4.05□□□□□ -1.76
LINC00393-201ENST00000443621 KDM6BO15054 1643 aa4.05□□□□□ -1.76
LINC00393-201ENST00000443621 RNF17Q9BXT8 1623 aaKnown RBP4.05□□□□□ -1.76
LINC00393-201ENST00000443621 HECW2Q9P2P5 1572 aa4.05□□□□□ -1.76
LINC00393-201ENST00000443621 PTPRTO14522 1441 aa4.04□□□□□ -1.76
LINC00393-201ENST00000443621 POGZQ7Z3K3 1410 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms