RNA–Protein interactions for RNA: ENST00000443563.5

HDAC6-211, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-211ENST00000443563 ARHGAP5Q13017 1502 aa17.04■□□□□ 0.32
HDAC6-211ENST00000443563 COL17A1Q9UMD9 1497 aaPredicted RBP17.04■□□□□ 0.32
HDAC6-211ENST00000443563 LRRC9Q6ZRR7 1453 aa17.01■□□□□ 0.31
HDAC6-211ENST00000443563 ITSN2Q9NZM3 1697 aa17.01■□□□□ 0.31
HDAC6-211ENST00000443563 CCNB3Q8WWL7 1395 aa17■□□□□ 0.31
HDAC6-211ENST00000443563 DENND4BO75064 1496 aaPredicted RBP16.99■□□□□ 0.31
HDAC6-211ENST00000443563 ADGRL1O94910 1474 aa16.99■□□□□ 0.31
HDAC6-211ENST00000443563 GPATCH8Q9UKJ3 1502 aaKnown RBP16.98■□□□□ 0.31
HDAC6-211ENST00000443563 RICTORQ6R327 1708 aa16.98■□□□□ 0.31
HDAC6-211ENST00000443563 NCOA2Q15596 1464 aa16.96■□□□□ 0.31
HDAC6-211ENST00000443563 SCAPERQ9BY12 1400 aa16.96■□□□□ 0.3
HDAC6-211ENST00000443563 FRMPD1Q5SYB0 1578 aa16.94■□□□□ 0.3
HDAC6-211ENST00000443563 RAPGEF3O95398 923 aa16.94■□□□□ 0.3
HDAC6-211ENST00000443563 CFDP1Q9UEE9 299 aaPredicted RBP16.93■□□□□ 0.3
HDAC6-211ENST00000443563 PLEKHH2Q8IVE3 1493 aa16.93■□□□□ 0.3
HDAC6-211ENST00000443563 ABCC1P33527 1531 aa16.92■□□□□ 0.3
HDAC6-211ENST00000443563 KANK4Q5T7N3 995 aaPredicted RBP16.92■□□□□ 0.3
HDAC6-211ENST00000443563 POGZQ7Z3K3 1410 aa16.92■□□□□ 0.3
HDAC6-211ENST00000443563 ZNF518AQ6AHZ1 1483 aa16.92■□□□□ 0.3
HDAC6-211ENST00000443563 ZMYM4Q5VZL5 1548 aa16.91■□□□□ 0.3
HDAC6-211ENST00000443563 SAMD9LQ8IVG5 1584 aa16.9■□□□□ 0.3
HDAC6-211ENST00000443563 ZNF777Q9ULD5 760 aaPredicted RBP16.9■□□□□ 0.3
HDAC6-211ENST00000443563 MAGI2Q86UL8 1455 aa16.9■□□□□ 0.3
HDAC6-211ENST00000443563 KIAA1107Q9UPP5 1409 aa16.87■□□□□ 0.29
HDAC6-211ENST00000443563 KDM5CP41229 1560 aa16.86■□□□□ 0.29
HDAC6-211ENST00000443563 ARHGEF40Q8TER5 1519 aa16.86■□□□□ 0.29
HDAC6-211ENST00000443563 SYCP2Q9BX26 1530 aa16.86■□□□□ 0.29
HDAC6-211ENST00000443563 MYOM3Q5VTT5 1437 aa16.85■□□□□ 0.29
HDAC6-211ENST00000443563 ZFYVE16Q7Z3T8 1539 aa16.85■□□□□ 0.29
HDAC6-211ENST00000443563 MIA2Q96PC5 1412 aa16.84■□□□□ 0.29
HDAC6-211ENST00000443563 ARHGEF12Q9NZN5 1544 aa16.84■□□□□ 0.29
HDAC6-211ENST00000443563 HECW2Q9P2P5 1572 aa16.84■□□□□ 0.29
HDAC6-211ENST00000443563 CAMSAP2Q08AD1 1489 aa16.82■□□□□ 0.28
HDAC6-211ENST00000443563 TRAPPC8Q9Y2L5 1435 aa16.82■□□□□ 0.28
HDAC6-211ENST00000443563 AFAP1Q8N556 730 aa16.82■□□□□ 0.28
HDAC6-211ENST00000443563 MLH3Q9UHC1 1453 aa16.81■□□□□ 0.28
HDAC6-211ENST00000443563 HNRNPMP52272 730 aaKnown RBP eCLIP16.81■□□□□ 0.28
HDAC6-211ENST00000443563 MYT1LQ9UL68 1186 aa16.81■□□□□ 0.28
HDAC6-211ENST00000443563 RSPH4AQ5TD94 716 aa16.8■□□□□ 0.28
HDAC6-211ENST00000443563 ZNF644Q9H582 1327 aaPredicted RBP16.78■□□□□ 0.28
HDAC6-211ENST00000443563 ATP10AO60312 1499 aa16.78■□□□□ 0.28
HDAC6-211ENST00000443563 YEATS2Q9ULM3 1422 aa16.78■□□□□ 0.28
HDAC6-211ENST00000443563 ARHGEF5Q12774 1597 aa16.77■□□□□ 0.28
HDAC6-211ENST00000443563 KIDINS220Q9ULH0 1771 aa16.77■□□□□ 0.28
HDAC6-211ENST00000443563 SPAG9O60271 1321 aaKnown RBP16.77■□□□□ 0.28
HDAC6-211ENST00000443563 MBD5Q9P267 1494 aa16.77■□□□□ 0.28
HDAC6-211ENST00000443563 CCDC141Q6ZP82 1450 aa16.76■□□□□ 0.27
HDAC6-211ENST00000443563 PTPN23Q9H3S7 1636 aa16.76■□□□□ 0.27
HDAC6-211ENST00000443563 ABCA6Q8N139 1617 aa16.75■□□□□ 0.27
HDAC6-211ENST00000443563 C9orf84Q5VXU9 1444 aa16.75■□□□□ 0.27
HDAC6-211ENST00000443563 REREQ9P2R6 1566 aa16.75■□□□□ 0.27
HDAC6-211ENST00000443563 INO80Q9ULG1 1556 aaPredicted RBP16.75■□□□□ 0.27
HDAC6-211ENST00000443563 DIP2CQ9Y2E4 1556 aa16.75■□□□□ 0.27
HDAC6-211ENST00000443563 ATP7AQ04656 1500 aa16.75■□□□□ 0.27
HDAC6-211ENST00000443563 FGD6Q6ZV73 1430 aa16.74■□□□□ 0.27
HDAC6-211ENST00000443563 ARID4BQ4LE39 1312 aaPredicted RBP16.73■□□□□ 0.27
HDAC6-211ENST00000443563 RTEL1-TNFRSF6BF6WH68 1400 aa16.73■□□□□ 0.27
HDAC6-211ENST00000443563 TSPY4P0CV99 314 aa16.72■□□□□ 0.27
HDAC6-211ENST00000443563 TSPY10P0CW01 314 aa16.72■□□□□ 0.27
HDAC6-211ENST00000443563 BCORL1Q5H9F3 1711 aa16.71■□□□□ 0.27
HDAC6-211ENST00000443563 TCOF1Q13428 1488 aaKnown RBP16.71■□□□□ 0.27
HDAC6-211ENST00000443563 ADGBQ8N7X0 1667 aa16.71■□□□□ 0.27
HDAC6-211ENST00000443563 KDM4FA0A1W2PPD8 638 aa16.69■□□□□ 0.26
HDAC6-211ENST00000443563 MAST1Q9Y2H9 1570 aa16.68■□□□□ 0.26
HDAC6-211ENST00000443563 AEBP2Q6ZN18 517 aaPredicted RBP16.68■□□□□ 0.26
HDAC6-211ENST00000443563 CROCC2H7BZ55 1655 aa16.68■□□□□ 0.26
HDAC6-211ENST00000443563 SIGLEC1Q9BZZ2 1709 aa16.67■□□□□ 0.26
HDAC6-211ENST00000443563 AGLP35573 1532 aa16.67■□□□□ 0.26
HDAC6-211ENST00000443563 ADAMTSL3P82987 1691 aa16.67■□□□□ 0.26
HDAC6-211ENST00000443563 DNMT1P26358 1616 aaKnown RBP16.67■□□□□ 0.26
HDAC6-211ENST00000443563 PPARGC1BQ86YN6 1023 aaKnown RBP16.65■□□□□ 0.26
HDAC6-211ENST00000443563 A2MP01023 1474 aa16.65■□□□□ 0.26
HDAC6-211ENST00000443563 SHANK2Q9UPX8 1470 aa16.65■□□□□ 0.26
HDAC6-211ENST00000443563 PLXNC1O60486 1568 aa16.64■□□□□ 0.25
HDAC6-211ENST00000443563 FAM50AQ14320 339 aaKnown RBP16.63■□□□□ 0.25
HDAC6-211ENST00000443563 DAPK1P53355 1430 aa16.62■□□□□ 0.25
HDAC6-211ENST00000443563 FER1L4A9Z1Z3 1794 aa16.62■□□□□ 0.25
HDAC6-211ENST00000443563 MADDQ8WXG6 1647 aa16.62■□□□□ 0.25
HDAC6-211ENST00000443563 ABCC5O15440 1437 aa16.62■□□□□ 0.25
HDAC6-211ENST00000443563 DHX29Q7Z478 1369 aaKnown RBP16.61■□□□□ 0.25
HDAC6-211ENST00000443563 MLECQ14165 292 aa16.6■□□□□ 0.25
HDAC6-211ENST00000443563 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.6■□□□□ 0.25
HDAC6-211ENST00000443563 RIMS1Q86UR5 1692 aaKnown RBP16.59■□□□□ 0.25
HDAC6-211ENST00000443563 DUOX2Q9NRD8 1548 aa16.56■□□□□ 0.24
HDAC6-211ENST00000443563 ESF1Q9H501 851 aaKnown RBP16.56■□□□□ 0.24
HDAC6-211ENST00000443563 EIF2AK4Q9P2K8 1649 aaKnown RBP16.56■□□□□ 0.24
HDAC6-211ENST00000443563 PTPRMP28827 1452 aa16.55■□□□□ 0.24
HDAC6-211ENST00000443563 ANKRD30AQ9BXX3 1397 aa16.55■□□□□ 0.24
HDAC6-211ENST00000443563 RRBP1Q9P2E9 1410 aaKnown RBP16.54■□□□□ 0.24
HDAC6-211ENST00000443563 ADGRL2O95490 1459 aa16.54■□□□□ 0.24
HDAC6-211ENST00000443563 KIF15Q9NS87 1388 aa16.53■□□□□ 0.24
HDAC6-211ENST00000443563 PPP6R1Q9UPN7 881 aa16.53■□□□□ 0.24
HDAC6-211ENST00000443563 CNTLNQ9NXG0 1405 aa16.53■□□□□ 0.24
HDAC6-211ENST00000443563 CHIC2Q9UKJ5 165 aa16.52■□□□□ 0.24
HDAC6-211ENST00000443563 MROH2AA6NES4 1674 aa16.51■□□□□ 0.23
HDAC6-211ENST00000443563 KIF3BO15066 747 aa16.51■□□□□ 0.23
HDAC6-211ENST00000443563 RRP7BPQ9NSQ0 103 aa16.51■□□□□ 0.23
HDAC6-211ENST00000443563 NCOA1Q15788 1441 aa16.51■□□□□ 0.23
HDAC6-211ENST00000443563 ERBINQ96RT1 1412 aa16.51■□□□□ 0.23
HDAC6-211ENST00000443563 FAM135AQ9P2D6 1515 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms