RNA–Protein interactions for RNA: ENST00000441080.2

PFDN4-202, Transcript of prefoldin subunit 4, humanhuman

TSL 5

Gene PFDN4, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-202ENST00000441080 LARP6Q9BRS8 491 aaKnown RBP11.7□□□□□ -0.54
PFDN4-202ENST00000441080 P3H3Q8IVL6 736 aa11.69□□□□□ -0.54
PFDN4-202ENST00000441080 TMEM121BQ9BXQ6 578 aaPredicted RBP11.69□□□□□ -0.54
PFDN4-202ENST00000441080 MFSD10Q14728 455 aa11.66□□□□□ -0.54
PFDN4-202ENST00000441080 DDX27Q96GQ7 796 aaKnown RBP11.66□□□□□ -0.54
PFDN4-202ENST00000441080 NBR1Q14596 966 aa11.64□□□□□ -0.55
PFDN4-202ENST00000441080 TMC2Q8TDI7 906 aa11.64□□□□□ -0.55
PFDN4-202ENST00000441080 KCNV2Q8TDN2 545 aa11.64□□□□□ -0.55
PFDN4-202ENST00000441080 GPHNQ9NQX3 736 aaPredicted RBP11.64□□□□□ -0.55
PFDN4-202ENST00000441080 E2F4Q16254 413 aa11.63□□□□□ -0.55
PFDN4-202ENST00000441080 PPP1R15BQ5SWA1 713 aa11.6□□□□□ -0.55
PFDN4-202ENST00000441080 C3orf67Q6ZVT6 689 aa11.6□□□□□ -0.55
PFDN4-202ENST00000441080 C2orf72A6NCS6 295 aa11.58□□□□□ -0.56
PFDN4-202ENST00000441080 DSG2Q14126 1118 aa11.57□□□□□ -0.56
PFDN4-202ENST00000441080 KIF3CO14782 793 aa11.56□□□□□ -0.56
PFDN4-202ENST00000441080 FOXK1P85037 733 aa11.55□□□□□ -0.56
PFDN4-202ENST00000441080 TMEM92Q6UXU6 159 aa11.55□□□□□ -0.56
PFDN4-202ENST00000441080 CAMK2BQ13554 666 aa11.53□□□□□ -0.56
PFDN4-202ENST00000441080 ARHGEF1Q92888 912 aaKnown RBP11.53□□□□□ -0.56
PFDN4-202ENST00000441080 PLPP6Q8IY26 295 aa11.52□□□□□ -0.57
PFDN4-202ENST00000441080 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.51□□□□□ -0.57
PFDN4-202ENST00000441080 ARIH1Q9Y4X5 557 aaPredicted RBP11.47□□□□□ -0.57
PFDN4-202ENST00000441080 POTEB2H3BUK9 544 aa11.46□□□□□ -0.57
PFDN4-202ENST00000441080 EMILIN3Q9NT22 766 aa11.45□□□□□ -0.58
PFDN4-202ENST00000441080 POTEJP0CG39 1038 aa11.44□□□□□ -0.58
PFDN4-202ENST00000441080 DPYSL4O14531 572 aa11.42□□□□□ -0.58
PFDN4-202ENST00000441080 SCUBE2Q9NQ36 999 aa11.41□□□□□ -0.58
PFDN4-202ENST00000441080 MAMSTRQ6ZN01 415 aa11.4□□□□□ -0.58
PFDN4-202ENST00000441080 SEMA3EO15041 775 aa11.39□□□□□ -0.59
PFDN4-202ENST00000441080 UPF1Q92900 1129 aaKnown RBP eCLIP11.39□□□□□ -0.59
PFDN4-202ENST00000441080 TULP1O00294 542 aaPredicted RBP11.36□□□□□ -0.59
PFDN4-202ENST00000441080 MAP3K9P80192 1104 aa11.36□□□□□ -0.59
PFDN4-202ENST00000441080 SLAIN1Q8ND83 568 aa11.36□□□□□ -0.59
PFDN4-202ENST00000441080 OXER1Q8TDS5 423 aa11.36□□□□□ -0.59
PFDN4-202ENST00000441080 TESPA1A2RU30 521 aaPredicted RBP11.35□□□□□ -0.59
PFDN4-202ENST00000441080 SPDYE16A6NNV3 312 aaPredicted RBP11.35□□□□□ -0.59
PFDN4-202ENST00000441080 PDIA6Q15084 440 aa11.34□□□□□ -0.59
PFDN4-202ENST00000441080 SLC34A2O95436 690 aa11.32□□□□□ -0.6
PFDN4-202ENST00000441080 TPRNQ4KMQ1 711 aa11.32□□□□□ -0.6
PFDN4-202ENST00000441080 TBC1D12O60347 775 aa11.3□□□□□ -0.6
PFDN4-202ENST00000441080 SMYD5Q6GMV2 418 aa11.3□□□□□ -0.6
PFDN4-202ENST00000441080 PTCD2Q8WV60 388 aaKnown RBP11.3□□□□□ -0.6
PFDN4-202ENST00000441080 LMOD2Q6P5Q4 547 aa11.29□□□□□ -0.6
PFDN4-202ENST00000441080 LHX8Q68G74 356 aa11.28□□□□□ -0.6
PFDN4-202ENST00000441080 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.28□□□□□ -0.6
PFDN4-202ENST00000441080 ZNF316A6NFI3 1004 aaPredicted RBP11.27□□□□□ -0.61
PFDN4-202ENST00000441080 PRKCSHP14314 528 aaPredicted RBP11.27□□□□□ -0.61
PFDN4-202ENST00000441080 MLLT3P42568 568 aaPredicted RBP11.27□□□□□ -0.61
PFDN4-202ENST00000441080 EVI5O60447 810 aa11.26□□□□□ -0.61
PFDN4-202ENST00000441080 DOK7Q18PE1 504 aa11.26□□□□□ -0.61
PFDN4-202ENST00000441080 PCDHGA4Q9Y5G9 962 aa11.25□□□□□ -0.61
PFDN4-202ENST00000441080 RIMBP2O15034 1052 aa11.23□□□□□ -0.61
PFDN4-202ENST00000441080 OTUD5Q96G74 571 aa11.23□□□□□ -0.61
PFDN4-202ENST00000441080 HOXB3P14651 431 aaPredicted RBP11.22□□□□□ -0.61
PFDN4-202ENST00000441080 GRXCR2A6NFK2 248 aa11.21□□□□□ -0.61
PFDN4-202ENST00000441080 PTGER2P43116 358 aa11.19□□□□□ -0.62
PFDN4-202ENST00000441080 ZNF710Q8N1W2 664 aa11.19□□□□□ -0.62
PFDN4-202ENST00000441080 DDX12PQ92771 950 aa11.19□□□□□ -0.62
PFDN4-202ENST00000441080 SNPHO15079 494 aa11.18□□□□□ -0.62
PFDN4-202ENST00000441080 ANO8Q9HCE9 1232 aaPredicted RBP11.17□□□□□ -0.62
PFDN4-202ENST00000441080 ZSWIM6Q9HCJ5 1215 aa11.17□□□□□ -0.62
PFDN4-202ENST00000441080 ARSIQ5FYB1 569 aa11.16□□□□□ -0.62
PFDN4-202ENST00000441080 RBM26Q5T8P6 1007 aaKnown RBP11.16□□□□□ -0.62
PFDN4-202ENST00000441080 NUDT7P0C024 238 aa11.14□□□□□ -0.63
PFDN4-202ENST00000441080 KHSRPQ92945 711 aaKnown RBP eCLIP11.14□□□□□ -0.63
PFDN4-202ENST00000441080 GPR153Q6NV75 609 aa11.13□□□□□ -0.63
PFDN4-202ENST00000441080 KDM4FA0A1W2PPD8 638 aa11.12□□□□□ -0.63
PFDN4-202ENST00000441080 OSBPP22059 807 aa11.12□□□□□ -0.63
PFDN4-202ENST00000441080 GPIHBP1Q8IV16 184 aa11.12□□□□□ -0.63
PFDN4-202ENST00000441080 ZC3H15Q8WU90 426 aaKnown RBP11.12□□□□□ -0.63
PFDN4-202ENST00000441080 PHF14O94880 888 aa11.1□□□□□ -0.63
PFDN4-202ENST00000441080 EPAS1Q99814 870 aa11.09□□□□□ -0.63
PFDN4-202ENST00000441080 JPH4Q96JJ6 628 aa11.08□□□□□ -0.64
PFDN4-202ENST00000441080 NUTM2FA1L443 756 aa11.07□□□□□ -0.64
PFDN4-202ENST00000441080 PCDHGA10Q9Y5H3 936 aa11.07□□□□□ -0.64
PFDN4-202ENST00000441080 HOXB1P14653 301 aaPredicted RBP11.06□□□□□ -0.64
PFDN4-202ENST00000441080 TYW1BQ6NUM6 668 aa11.06□□□□□ -0.64
PFDN4-202ENST00000441080 PRIM1P49642 420 aaKnown RBP11.05□□□□□ -0.64
PFDN4-202ENST00000441080 FOSBP53539 338 aa11.05□□□□□ -0.64
PFDN4-202ENST00000441080 ZNF454Q8N9F8 522 aa11.05□□□□□ -0.64
PFDN4-202ENST00000441080 EN1Q05925 392 aaPredicted RBP11.04□□□□□ -0.64
PFDN4-202ENST00000441080 LHX6Q9UPM6 363 aa11.04□□□□□ -0.64
PFDN4-202ENST00000441080 MAP3K7O43318 606 aa11.03□□□□□ -0.64
PFDN4-202ENST00000441080 FBXW7Q969H0 707 aa11.03□□□□□ -0.64
PFDN4-202ENST00000441080 RBM33Q96EV2 1170 aaKnown RBP11.03□□□□□ -0.64
PFDN4-202ENST00000441080 ZMYND10O75800 440 aa11.02□□□□□ -0.65
PFDN4-202ENST00000441080 ZDHHC16Q969W1 377 aa11.01□□□□□ -0.65
PFDN4-202ENST00000441080 GPR37O15354 613 aa11□□□□□ -0.65
PFDN4-202ENST00000441080 PSDA5PKW4 1024 aaPredicted RBP10.99□□□□□ -0.65
PFDN4-202ENST00000441080 FCHSD2O94868 740 aa10.99□□□□□ -0.65
PFDN4-202ENST00000441080 PPP4R3BQ5MIZ7 849 aa10.98□□□□□ -0.65
PFDN4-202ENST00000441080 BARGINQ6ZT62 677 aa10.98□□□□□ -0.65
PFDN4-202ENST00000441080 CDHR5Q9HBB8 845 aa10.98□□□□□ -0.65
PFDN4-202ENST00000441080 TSR1Q2NL82 804 aaKnown RBP10.97□□□□□ -0.65
PFDN4-202ENST00000441080 ST18O60284 1047 aa10.96□□□□□ -0.65
PFDN4-202ENST00000441080 PTGDRQ13258 359 aa10.96□□□□□ -0.65
PFDN4-202ENST00000441080 HIC1Q14526 733 aa10.96□□□□□ -0.65
PFDN4-202ENST00000441080 ADAM33Q9BZ11 813 aa10.96□□□□□ -0.65
PFDN4-202ENST00000441080 SLC24A3Q9HC58 644 aa10.96□□□□□ -0.65
PFDN4-202ENST00000441080 KRI1Q8N9T8 703 aaKnown RBP10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms