RNA–Protein interactions for RNA: ENST00000440571.5

CNOT3-203, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 5

Gene CNOT3, Length 1,125 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-203ENST00000440571 DENND4BO75064 1496 aaPredicted RBP35.29■■■■□ 3.24
CNOT3-203ENST00000440571 LRRC9Q6ZRR7 1453 aa35.28■■■■□ 3.24
CNOT3-203ENST00000440571 CFAP74Q9C0B2 1584 aa35.27■■■■□ 3.24
CNOT3-203ENST00000440571 SCAPERQ9BY12 1400 aa35.27■■■■□ 3.24
CNOT3-203ENST00000440571 ZNF777Q9ULD5 760 aaPredicted RBP35.27■■■■□ 3.24
CNOT3-203ENST00000440571 GPATCH8Q9UKJ3 1502 aaKnown RBP35.27■■■■□ 3.24
CNOT3-203ENST00000440571 MYO5CQ9NQX4 1742 aa35.26■■■■□ 3.24
CNOT3-203ENST00000440571 ADGRL1O94910 1474 aa35.24■■■■□ 3.23
CNOT3-203ENST00000440571 NCOA2Q15596 1464 aa35.18■■■■□ 3.22
CNOT3-203ENST00000440571 PREX2Q70Z35 1606 aa35.14■■■■□ 3.22
CNOT3-203ENST00000440571 AFAP1Q8N556 730 aa35.14■■■■□ 3.22
CNOT3-203ENST00000440571 CDC42BPBQ9Y5S2 1711 aa35.13■■■■□ 3.21
CNOT3-203ENST00000440571 CDC42BPAQ5VT25 1732 aa35.1■■■■□ 3.21
CNOT3-203ENST00000440571 SUPT6HQ7KZ85 1726 aaKnown RBP35.1■■■■□ 3.21
CNOT3-203ENST00000440571 POGZQ7Z3K3 1410 aa35.1■■■■□ 3.21
CNOT3-203ENST00000440571 HNRNPMP52272 730 aaKnown RBP eCLIP35.1■■■■□ 3.21
CNOT3-203ENST00000440571 MYT1LQ9UL68 1186 aa35.08■■■■□ 3.21
CNOT3-203ENST00000440571 ZNF644Q9H582 1327 aaPredicted RBP35.06■■■■□ 3.2
CNOT3-203ENST00000440571 FRMPD1Q5SYB0 1578 aa35.04■■■■□ 3.2
CNOT3-203ENST00000440571 ZNF518AQ6AHZ1 1483 aa35.03■■■■□ 3.2
CNOT3-203ENST00000440571 ARHGEF12Q9NZN5 1544 aa35.02■■■■□ 3.2
CNOT3-203ENST00000440571 KIAA1107Q9UPP5 1409 aa35.01■■■■□ 3.2
CNOT3-203ENST00000440571 TRAPPC8Q9Y2L5 1435 aa35.01■■■■□ 3.2
CNOT3-203ENST00000440571 PLEKHH2Q8IVE3 1493 aa35.01■■■■□ 3.19
CNOT3-203ENST00000440571 RICTORQ6R327 1708 aa35■■■■□ 3.19
CNOT3-203ENST00000440571 ABCC1P33527 1531 aa34.99■■■■□ 3.19
CNOT3-203ENST00000440571 MAGI2Q86UL8 1455 aa34.98■■■■□ 3.19
CNOT3-203ENST00000440571 SAMD9LQ8IVG5 1584 aa34.97■■■■□ 3.19
CNOT3-203ENST00000440571 ZMYM4Q5VZL5 1548 aa34.94■■■■□ 3.18
CNOT3-203ENST00000440571 ITSN2Q9NZM3 1697 aa34.94■■■■□ 3.18
CNOT3-203ENST00000440571 MYOM3Q5VTT5 1437 aa34.92■■■■□ 3.18
CNOT3-203ENST00000440571 YEATS2Q9ULM3 1422 aa34.92■■■■□ 3.18
CNOT3-203ENST00000440571 ARID4BQ4LE39 1312 aaPredicted RBP34.92■■■■□ 3.18
CNOT3-203ENST00000440571 SPAG9O60271 1321 aaKnown RBP34.91■■■■□ 3.18
CNOT3-203ENST00000440571 RSPH4AQ5TD94 716 aa34.91■■■■□ 3.18
CNOT3-203ENST00000440571 SYCP2Q9BX26 1530 aa34.91■■■■□ 3.18
CNOT3-203ENST00000440571 KDM4FA0A1W2PPD8 638 aa34.9■■■■□ 3.18
CNOT3-203ENST00000440571 PPARGC1BQ86YN6 1023 aaKnown RBP34.89■■■■□ 3.18
CNOT3-203ENST00000440571 ZFYVE16Q7Z3T8 1539 aa34.89■■■■□ 3.18
CNOT3-203ENST00000440571 MIA2Q96PC5 1412 aa34.89■■■■□ 3.18
CNOT3-203ENST00000440571 MLH3Q9UHC1 1453 aa34.86■■■■□ 3.17
CNOT3-203ENST00000440571 KDM5CP41229 1560 aa34.85■■■■□ 3.17
CNOT3-203ENST00000440571 MBD5Q9P267 1494 aa34.84■■■■□ 3.17
CNOT3-203ENST00000440571 AEBP2Q6ZN18 517 aaPredicted RBP34.84■■■■□ 3.17
CNOT3-203ENST00000440571 CAMSAP2Q08AD1 1489 aa34.84■■■■□ 3.17
CNOT3-203ENST00000440571 ATP10AO60312 1499 aa34.83■■■■□ 3.17
CNOT3-203ENST00000440571 ARHGEF40Q8TER5 1519 aa34.81■■■■□ 3.16
CNOT3-203ENST00000440571 TSPY4P0CV99 314 aa34.8■■■■□ 3.16
CNOT3-203ENST00000440571 TSPY10P0CW01 314 aa34.8■■■■□ 3.16
CNOT3-203ENST00000440571 HECW2Q9P2P5 1572 aa34.75■■■■□ 3.15
CNOT3-203ENST00000440571 C9orf84Q5VXU9 1444 aa34.74■■■■□ 3.15
CNOT3-203ENST00000440571 FGD6Q6ZV73 1430 aa34.73■■■■□ 3.15
CNOT3-203ENST00000440571 CCDC141Q6ZP82 1450 aa34.71■■■■□ 3.15
CNOT3-203ENST00000440571 MLECQ14165 292 aa34.7■■■■□ 3.15
CNOT3-203ENST00000440571 RTEL1-TNFRSF6BF6WH68 1400 aa34.68■■■■□ 3.14
CNOT3-203ENST00000440571 FAM50AQ14320 339 aaKnown RBP34.67■■■■□ 3.14
CNOT3-203ENST00000440571 DIP2CQ9Y2E4 1556 aa34.64■■■■□ 3.14
CNOT3-203ENST00000440571 ATP7AQ04656 1500 aa34.64■■■■□ 3.14
CNOT3-203ENST00000440571 KIDINS220Q9ULH0 1771 aa34.64■■■■□ 3.14
CNOT3-203ENST00000440571 ARHGEF5Q12774 1597 aa34.63■■■■□ 3.13
CNOT3-203ENST00000440571 PTPN23Q9H3S7 1636 aa34.62■■■■□ 3.13
CNOT3-203ENST00000440571 TCOF1Q13428 1488 aaKnown RBP34.6■■■■□ 3.13
CNOT3-203ENST00000440571 ABCA6Q8N139 1617 aa34.6■■■■□ 3.13
CNOT3-203ENST00000440571 INO80Q9ULG1 1556 aaPredicted RBP34.56■■■■□ 3.12
CNOT3-203ENST00000440571 ABCC5O15440 1437 aa34.55■■■■□ 3.12
CNOT3-203ENST00000440571 A2MP01023 1474 aa34.55■■■■□ 3.12
CNOT3-203ENST00000440571 REREQ9P2R6 1566 aa34.54■■■■□ 3.12
CNOT3-203ENST00000440571 DHX29Q7Z478 1369 aaKnown RBP34.52■■■■□ 3.12
CNOT3-203ENST00000440571 BCORL1Q5H9F3 1711 aa34.5■■■■□ 3.11
CNOT3-203ENST00000440571 DAPK1P53355 1430 aa34.5■■■■□ 3.11
CNOT3-203ENST00000440571 CHIC2Q9UKJ5 165 aa34.5■■■■□ 3.11
CNOT3-203ENST00000440571 AGLP35573 1532 aa34.5■■■■□ 3.11
CNOT3-203ENST00000440571 SIGLEC1Q9BZZ2 1709 aa34.5■■■■□ 3.11
CNOT3-203ENST00000440571 ESF1Q9H501 851 aaKnown RBP34.47■■■■□ 3.11
CNOT3-203ENST00000440571 ADAMTSL3P82987 1691 aa34.46■■■■□ 3.11
CNOT3-203ENST00000440571 GGT6Q6P531 493 aa34.45■■■■□ 3.11
CNOT3-203ENST00000440571 RRP7BPQ9NSQ0 103 aa34.45■■■■□ 3.11
CNOT3-203ENST00000440571 KIF3BO15066 747 aa34.43■■■■□ 3.1
CNOT3-203ENST00000440571 MAST1Q9Y2H9 1570 aa34.42■■■■□ 3.1
CNOT3-203ENST00000440571 SHANK2Q9UPX8 1470 aa34.39■■■■□ 3.1
CNOT3-203ENST00000440571 PLPPR3Q6T4P5 718 aa34.39■■■■□ 3.1
CNOT3-203ENST00000440571 PTPRMP28827 1452 aa34.39■■■■□ 3.1
CNOT3-203ENST00000440571 ITGAEP38570 1179 aa34.38■■■■□ 3.09
CNOT3-203ENST00000440571 DNMT1P26358 1616 aaKnown RBP34.37■■■■□ 3.09
CNOT3-203ENST00000440571 ANKRD30AQ9BXX3 1397 aa34.37■■■■□ 3.09
CNOT3-203ENST00000440571 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP34.37■■■■□ 3.09
CNOT3-203ENST00000440571 ADGBQ8N7X0 1667 aa34.37■■■■□ 3.09
CNOT3-203ENST00000440571 MADDQ8WXG6 1647 aa34.37■■■■□ 3.09
CNOT3-203ENST00000440571 PPP6R1Q9UPN7 881 aa34.36■■■■□ 3.09
CNOT3-203ENST00000440571 PLXNC1O60486 1568 aa34.36■■■■□ 3.09
CNOT3-203ENST00000440571 KIF15Q9NS87 1388 aa34.35■■■■□ 3.09
CNOT3-203ENST00000440571 RRBP1Q9P2E9 1410 aaKnown RBP34.3■■■■□ 3.08
CNOT3-203ENST00000440571 NCOA1Q15788 1441 aa34.3■■■■□ 3.08
CNOT3-203ENST00000440571 CEBPAP49715 358 aaPredicted RBP34.29■■■■□ 3.08
CNOT3-203ENST00000440571 PTPRKQ15262 1439 aa34.27■■■■□ 3.08
CNOT3-203ENST00000440571 RIMS1Q86UR5 1692 aaKnown RBP34.25■■■■□ 3.07
CNOT3-203ENST00000440571 DUOX2Q9NRD8 1548 aa34.25■■■■□ 3.07
CNOT3-203ENST00000440571 CNTLNQ9NXG0 1405 aa34.25■■■■□ 3.07
CNOT3-203ENST00000440571 CROCC2H7BZ55 1655 aa34.24■■■■□ 3.07
CNOT3-203ENST00000440571 WASHC2CQ9Y4E1 1318 aa34.22■■■■□ 3.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms