RNA–Protein interactions for RNA: ENST00000440571.5

CNOT3-203, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 5

Gene CNOT3, Length 1,125 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-203ENST00000440571 NISCHQ9Y2I1 1504 aa54.12■■■■■ 6.25
CNOT3-203ENST00000440571 CCDC180Q9P1Z9 1646 aa47.85■■■■■ 5.25
CNOT3-203ENST00000440571 ABCC9O60706 1549 aa46.95■■■■■ 5.11
CNOT3-203ENST00000440571 DCAF8L2P0C7V8 631 aa45.5■■■■■ 4.87
CNOT3-203ENST00000440571 RB1CC1Q8TDY2 1594 aa45.12■■■■■ 4.81
CNOT3-203ENST00000440571 NACADO15069 1562 aa45.11■■■■■ 4.81
CNOT3-203ENST00000440571 ZCCHC6Q5VYS8 1495 aaKnown RBP45.05■■■■■ 4.8
CNOT3-203ENST00000440571 MYO15BQ96JP2 1530 aa44.87■■■■■ 4.77
CNOT3-203ENST00000440571 DCAF1Q9Y4B6 1507 aa44.73■■■■■ 4.75
CNOT3-203ENST00000440571 PABPN1Q86U42 306 aaKnown RBP eCLIP44.06■■■■■ 4.64
CNOT3-203ENST00000440571 UNC13AQ9UPW8 1703 aa43.87■■■■■ 4.61
CNOT3-203ENST00000440571 SCRIBQ14160 1630 aa43.8■■■■■ 4.6
CNOT3-203ENST00000440571 BICRAQ9NZM4 1560 aa43.7■■■■■ 4.59
CNOT3-203ENST00000440571 SHROOM4Q9ULL8 1493 aa43.26■■■■■ 4.52
CNOT3-203ENST00000440571 DNAJC5BQ9UF47 199 aa43.1■■■■■ 4.49
CNOT3-203ENST00000440571 EIF4G1Q04637 1599 aaKnown RBP42.57■■■■■ 4.41
CNOT3-203ENST00000440571 CC2D2AQ9P2K1 1620 aa42.36■■■■■ 4.37
CNOT3-203ENST00000440571 CECR2Q9BXF3 1484 aa42.19■■■■■ 4.34
CNOT3-203ENST00000440571 BAZ1AQ9NRL2 1556 aaPredicted RBP41.91■■■■■ 4.3
CNOT3-203ENST00000440571 SMARCA4P51532 1647 aa41.87■■■■■ 4.29
CNOT3-203ENST00000440571 ATAD2BQ9ULI0 1458 aa41.74■■■■■ 4.27
CNOT3-203ENST00000440571 NCAPD3P42695 1498 aa41.72■■■■■ 4.27
CNOT3-203ENST00000440571 MROH2BQ7Z745 1585 aa41.71■■■■■ 4.27
CNOT3-203ENST00000440571 SMARCA2P51531 1590 aa41.63■■■■■ 4.26
CNOT3-203ENST00000440571 PEG3Q9GZU2 1588 aa41.45■■■■■ 4.23
CNOT3-203ENST00000440571 BAZ1BQ9UIG0 1483 aaKnown RBP41.39■■■■■ 4.22
CNOT3-203ENST00000440571 HMGXB3Q12766 1538 aa41.39■■■■■ 4.22
CNOT3-203ENST00000440571 RSF1Q96T23 1441 aaPredicted RBP41.35■■■■■ 4.21
CNOT3-203ENST00000440571 WIZO95785 1651 aa41.2■■■■■ 4.19
CNOT3-203ENST00000440571 TOP2AP11388 1531 aaKnown RBP40.79■■■■■ 4.12
CNOT3-203ENST00000440571 NESP48681 1621 aa40.64■■■■■ 4.1
CNOT3-203ENST00000440571 SUPT5HO00267 1087 aaKnown RBP40.61■■■■■ 4.09
CNOT3-203ENST00000440571 CADPSQ9ULU8 1353 aa40.57■■■■■ 4.08
CNOT3-203ENST00000440571 LAMC3Q9Y6N6 1575 aa40.48■■■■■ 4.07
CNOT3-203ENST00000440571 ERCC6Q03468 1493 aa40.48■■■■■ 4.07
CNOT3-203ENST00000440571 CCDC88BA6NC98 1476 aa40.43■■■■■ 4.06
CNOT3-203ENST00000440571 PDS5BQ9NTI5 1447 aa40.37■■■■■ 4.05
CNOT3-203ENST00000440571 CFTRP13569 1480 aa40.27■■■■■ 4.04
CNOT3-203ENST00000440571 FANCD2Q9BXW9 1451 aa40.03■■■■■ 4
CNOT3-203ENST00000440571 KIF21AQ7Z4S6 1674 aa39.97■■■■□ 3.99
CNOT3-203ENST00000440571 CEP164Q9UPV0 1460 aa39.94■■■■□ 3.98
CNOT3-203ENST00000440571 CUX2O14529 1486 aa39.94■■■■□ 3.98
CNOT3-203ENST00000440571 MRC2Q9UBG0 1479 aa39.85■■■■□ 3.97
CNOT3-203ENST00000440571 THOC2Q8NI27 1593 aaKnown RBP39.83■■■■□ 3.97
CNOT3-203ENST00000440571 PRDM2Q13029 1718 aa39.65■■■■□ 3.94
CNOT3-203ENST00000440571 WDR62O43379 1518 aa39.64■■■■□ 3.94
CNOT3-203ENST00000440571 URB2Q14146 1524 aaKnown RBP39.58■■■■□ 3.93
CNOT3-203ENST00000440571 ABCC8Q09428 1581 aa39.42■■■■□ 3.9
CNOT3-203ENST00000440571 TOPBP1Q92547 1522 aa39.37■■■■□ 3.89
CNOT3-203ENST00000440571 DNMBPQ6XZF7 1577 aa39.28■■■■□ 3.88
CNOT3-203ENST00000440571 IFT140Q96RY7 1462 aa39.12■■■■□ 3.85
CNOT3-203ENST00000440571 CUX1P39880 1505 aa39.11■■■■□ 3.85
CNOT3-203ENST00000440571 POLA1P09884 1462 aaPredicted RBP39.05■■■■□ 3.84
CNOT3-203ENST00000440571 SOGA1O94964 1423 aa39.02■■■■□ 3.84
CNOT3-203ENST00000440571 WRNQ14191 1432 aaPredicted RBP eCLIP38.99■■■■□ 3.83
CNOT3-203ENST00000440571 FGD5Q6ZNL6 1462 aa38.98■■■■□ 3.83
CNOT3-203ENST00000440571 RAD54L2Q9Y4B4 1467 aa38.94■■■■□ 3.82
CNOT3-203ENST00000440571 ZNF608Q9ULD9 1512 aaPredicted RBP38.93■■■■□ 3.82
CNOT3-203ENST00000440571 TARBP1Q13395 1621 aaKnown RBP38.84■■■■□ 3.81
CNOT3-203ENST00000440571 AQRO60306 1485 aaKnown RBP eCLIP38.79■■■■□ 3.86e-9■■■■□ 22.9
CNOT3-203ENST00000440571 TDRD9Q8NDG6 1382 aaKnown RBP38.79■■■■□ 3.8
CNOT3-203ENST00000440571 TOP2BQ02880 1626 aa38.76■■■■□ 3.8
CNOT3-203ENST00000440571 SYNJ1O43426 1573 aa38.75■■■■□ 3.79
CNOT3-203ENST00000440571 DNAJC5Q9H3Z4 198 aa38.74■■■■□ 3.79
CNOT3-203ENST00000440571 BIVM-ERCC5R4GMW8 1640 aa38.68■■■■□ 3.78
CNOT3-203ENST00000440571 EIF4G3O43432 1585 aaKnown RBP38.64■■■■□ 3.78
CNOT3-203ENST00000440571 ABCA10Q8WWZ4 1543 aa38.61■■■■□ 3.77
CNOT3-203ENST00000440571 OSCARQ8IYS5 282 aa38.53■■■■□ 3.76
CNOT3-203ENST00000440571 WDR97A6NE52 1622 aa38.52■■■■□ 3.76
CNOT3-203ENST00000440571 GAPVD1Q14C86 1478 aa38.5■■■■□ 3.75
CNOT3-203ENST00000440571 GRIN2BQ13224 1484 aa38.47■■■■□ 3.75
CNOT3-203ENST00000440571 FBLN2P98095 1184 aa38.45■■■■□ 3.75
CNOT3-203ENST00000440571 SNAPC4Q5SXM2 1469 aa38.36■■■■□ 3.73
CNOT3-203ENST00000440571 CHMP7Q8WUX9 453 aaPredicted RBP38.35■■■■□ 3.73
CNOT3-203ENST00000440571 TRIM41Q8WV44 630 aa38.35■■■■□ 3.73
CNOT3-203ENST00000440571 ABCA5Q8WWZ7 1642 aa38.31■■■■□ 3.72
CNOT3-203ENST00000440571 MAGI1Q96QZ7 1491 aaPredicted RBP38.3■■■■□ 3.72
CNOT3-203ENST00000440571 KIF27Q86VH2 1401 aa38.2■■■■□ 3.71
CNOT3-203ENST00000440571 SYNJ2O15056 1496 aa38.17■■■■□ 3.7
CNOT3-203ENST00000440571 PBRM1Q86U86 1689 aa38.17■■■■□ 3.7
CNOT3-203ENST00000440571 ERICH3Q5RHP9 1530 aa38.12■■■■□ 3.69
CNOT3-203ENST00000440571 IGF1RP08069 1367 aa38.07■■■■□ 3.69
CNOT3-203ENST00000440571 FHAD1B1AJZ9 1412 aa38.07■■■■□ 3.69
CNOT3-203ENST00000440571 CHD1O14646 1710 aa38.07■■■■□ 3.68
CNOT3-203ENST00000440571 ADAMTS12P58397 1594 aa37.96■■■■□ 3.67
CNOT3-203ENST00000440571 GRIN2AQ12879 1464 aa37.93■■■■□ 3.66
CNOT3-203ENST00000440571 CHIC1Q5VXU3 224 aa37.93■■■■□ 3.66
CNOT3-203ENST00000440571 CARMIL1Q5VZK9 1371 aa37.86■■■■□ 3.65
CNOT3-203ENST00000440571 RUSC2Q8N2Y8 1516 aa37.86■■■■□ 3.65
CNOT3-203ENST00000440571 NUP160Q12769 1436 aa37.77■■■■□ 3.64
CNOT3-203ENST00000440571 CLASP1Q7Z460 1538 aa37.76■■■■□ 3.63
CNOT3-203ENST00000440571 CUL7Q14999 1698 aa37.72■■■■□ 3.63
CNOT3-203ENST00000440571 ARHGEF11O15085 1522 aa37.67■■■■□ 3.62
CNOT3-203ENST00000440571 CEP170Q5SW79 1584 aa37.67■■■■□ 3.62
CNOT3-203ENST00000440571 CSRNP3Q8WYN3 585 aa37.62■■■■□ 3.61
CNOT3-203ENST00000440571 RIMBP3CA6NJZ7 1639 aa37.6■■■■□ 3.61
CNOT3-203ENST00000440571 RIMBP3BA6NNM3 1639 aa37.6■■■■□ 3.61
CNOT3-203ENST00000440571 RIMBP3Q9UFD9 1639 aa37.6■■■■□ 3.61
CNOT3-203ENST00000440571 JPH4Q96JJ6 628 aa37.58■■■■□ 3.61
CNOT3-203ENST00000440571 RAPGEF2Q9Y4G8 1499 aa37.58■■■■□ 3.61
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms