RNA–Protein interactions for RNA: ENST00000440421.2

LTBR-202, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 729 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-202ENST00000440421 CDC42BPBQ9Y5S2 1711 aa21.92■■□□□ 1.1
LTBR-202ENST00000440421 PREX2Q70Z35 1606 aa21.91■■□□□ 1.1
LTBR-202ENST00000440421 MTUS2Q5JR59 1369 aa21.9■■□□□ 1.1
LTBR-202ENST00000440421 POGZQ7Z3K3 1410 aa21.89■■□□□ 1.09
LTBR-202ENST00000440421 CDC42BPAQ5VT25 1732 aa21.88■■□□□ 1.09
LTBR-202ENST00000440421 ZMYM4Q5VZL5 1548 aa21.87■■□□□ 1.09
LTBR-202ENST00000440421 VPS8Q8N3P4 1428 aa21.86■■□□□ 1.09
LTBR-202ENST00000440421 ARHGEF40Q8TER5 1519 aa21.85■■□□□ 1.09
LTBR-202ENST00000440421 ZFYVE16Q7Z3T8 1539 aa21.84■■□□□ 1.09
LTBR-202ENST00000440421 YEATS2Q9ULM3 1422 aa21.83■■□□□ 1.09
LTBR-202ENST00000440421 EHBP1L1Q8N3D4 1523 aa21.83■■□□□ 1.09
LTBR-202ENST00000440421 ARID4BQ4LE39 1312 aaPredicted RBP21.82■■□□□ 1.08
LTBR-202ENST00000440421 GPATCH8Q9UKJ3 1502 aaKnown RBP21.82■■□□□ 1.08
LTBR-202ENST00000440421 ZNF777Q9ULD5 760 aaPredicted RBP21.82■■□□□ 1.08
LTBR-202ENST00000440421 AFAP1Q8N556 730 aa21.81■■□□□ 1.08
LTBR-202ENST00000440421 CCNB3Q8WWL7 1395 aa21.81■■□□□ 1.08
LTBR-202ENST00000440421 ZNF518AQ6AHZ1 1483 aa21.8■■□□□ 1.08
LTBR-202ENST00000440421 MAGI2Q86UL8 1455 aa21.8■■□□□ 1.08
LTBR-202ENST00000440421 ABCC1P33527 1531 aa21.8■■□□□ 1.08
LTBR-202ENST00000440421 ARHGEF12Q9NZN5 1544 aa21.79■■□□□ 1.08
LTBR-202ENST00000440421 TIAM1Q13009 1591 aa21.78■■□□□ 1.08
LTBR-202ENST00000440421 ITSN2Q9NZM3 1697 aa21.77■■□□□ 1.08
LTBR-202ENST00000440421 CFDP1Q9UEE9 299 aaPredicted RBP21.77■■□□□ 1.08
LTBR-202ENST00000440421 MYT1LQ9UL68 1186 aa21.77■■□□□ 1.08
LTBR-202ENST00000440421 SAMD9LQ8IVG5 1584 aa21.76■■□□□ 1.07
LTBR-202ENST00000440421 TRAPPC8Q9Y2L5 1435 aa21.76■■□□□ 1.07
LTBR-202ENST00000440421 KDM5CP41229 1560 aa21.75■■□□□ 1.07
LTBR-202ENST00000440421 BCORL1Q5H9F3 1711 aa21.74■■□□□ 1.07
LTBR-202ENST00000440421 SIGLEC1Q9BZZ2 1709 aa21.73■■□□□ 1.07
LTBR-202ENST00000440421 ADAMTSL3P82987 1691 aa21.72■■□□□ 1.07
LTBR-202ENST00000440421 SYCP2Q9BX26 1530 aa21.72■■□□□ 1.07
LTBR-202ENST00000440421 HECW2Q9P2P5 1572 aa21.72■■□□□ 1.07
LTBR-202ENST00000440421 SUPT6HQ7KZ85 1726 aaKnown RBP21.72■■□□□ 1.07
LTBR-202ENST00000440421 ATP10AO60312 1499 aa21.71■■□□□ 1.07
LTBR-202ENST00000440421 HNRNPMP52272 730 aaKnown RBP eCLIP21.71■■□□□ 1.07
LTBR-202ENST00000440421 NCOA2Q15596 1464 aa21.71■■□□□ 1.07
LTBR-202ENST00000440421 C9orf84Q5VXU9 1444 aa21.69■■□□□ 1.06
LTBR-202ENST00000440421 LRRC9Q6ZRR7 1453 aa21.69■■□□□ 1.06
LTBR-202ENST00000440421 MLH3Q9UHC1 1453 aa21.68■■□□□ 1.06
LTBR-202ENST00000440421 MADDQ8WXG6 1647 aa21.68■■□□□ 1.06
LTBR-202ENST00000440421 PLEKHH2Q8IVE3 1493 aa21.67■■□□□ 1.06
LTBR-202ENST00000440421 ZNF644Q9H582 1327 aaPredicted RBP21.67■■□□□ 1.06
LTBR-202ENST00000440421 MLECQ14165 292 aa21.67■■□□□ 1.06
LTBR-202ENST00000440421 KANK4Q5T7N3 995 aaPredicted RBP21.67■■□□□ 1.06
LTBR-202ENST00000440421 ABCA6Q8N139 1617 aa21.66■■□□□ 1.06
LTBR-202ENST00000440421 DIP2CQ9Y2E4 1556 aa21.66■■□□□ 1.06
LTBR-202ENST00000440421 MAP3K1Q13233 1512 aa21.66■■□□□ 1.06
LTBR-202ENST00000440421 KIAA1107Q9UPP5 1409 aa21.65■■□□□ 1.06
LTBR-202ENST00000440421 PTPRMP28827 1452 aa21.64■■□□□ 1.05
LTBR-202ENST00000440421 KIDINS220Q9ULH0 1771 aa21.64■■□□□ 1.05
LTBR-202ENST00000440421 APLP2Q06481 763 aa21.63■■□□□ 1.05
LTBR-202ENST00000440421 SPAG9O60271 1321 aaKnown RBP21.62■■□□□ 1.05
LTBR-202ENST00000440421 RIMS1Q86UR5 1692 aaKnown RBP21.62■■□□□ 1.05
LTBR-202ENST00000440421 CAMSAP2Q08AD1 1489 aa21.58■■□□□ 1.04
LTBR-202ENST00000440421 REREQ9P2R6 1566 aa21.57■■□□□ 1.04
LTBR-202ENST00000440421 ATP7AQ04656 1500 aa21.57■■□□□ 1.04
LTBR-202ENST00000440421 PLPPR3Q6T4P5 718 aa21.57■■□□□ 1.04
LTBR-202ENST00000440421 MBD5Q9P267 1494 aa21.57■■□□□ 1.04
LTBR-202ENST00000440421 FER1L4A9Z1Z3 1794 aa21.56■■□□□ 1.04
LTBR-202ENST00000440421 INO80Q9ULG1 1556 aaPredicted RBP21.56■■□□□ 1.04
LTBR-202ENST00000440421 AGLP35573 1532 aa21.52■■□□□ 1.04
LTBR-202ENST00000440421 MYOM3Q5VTT5 1437 aa21.51■■□□□ 1.03
LTBR-202ENST00000440421 CCDC141Q6ZP82 1450 aa21.5■■□□□ 1.03
LTBR-202ENST00000440421 A2MP01023 1474 aa21.47■■□□□ 1.03
LTBR-202ENST00000440421 MIA2Q96PC5 1412 aa21.46■■□□□ 1.03
LTBR-202ENST00000440421 ARHGEF5Q12774 1597 aa21.45■■□□□ 1.02
LTBR-202ENST00000440421 RSPH4AQ5TD94 716 aa21.45■■□□□ 1.02
LTBR-202ENST00000440421 RTEL1-TNFRSF6BF6WH68 1400 aa21.45■■□□□ 1.02
LTBR-202ENST00000440421 ADGBQ8N7X0 1667 aa21.44■■□□□ 1.02
LTBR-202ENST00000440421 CEBPAP49715 358 aaPredicted RBP21.44■■□□□ 1.02
LTBR-202ENST00000440421 PLXNC1O60486 1568 aa21.44■■□□□ 1.02
LTBR-202ENST00000440421 ESF1Q9H501 851 aaKnown RBP21.43■■□□□ 1.02
LTBR-202ENST00000440421 TSPY4P0CV99 314 aa21.41■■□□□ 1.02
LTBR-202ENST00000440421 TSPY10P0CW01 314 aa21.41■■□□□ 1.02
LTBR-202ENST00000440421 PTPN23Q9H3S7 1636 aa21.38■■□□□ 1.01
LTBR-202ENST00000440421 GGT6Q6P531 493 aa21.38■■□□□ 1.01
LTBR-202ENST00000440421 LMTK3Q96Q04 1460 aa21.38■■□□□ 1.01
LTBR-202ENST00000440421 FGD6Q6ZV73 1430 aa21.37■■□□□ 1.01
LTBR-202ENST00000440421 DHX29Q7Z478 1369 aaKnown RBP21.36■■□□□ 1.01
LTBR-202ENST00000440421 C3P01024 1663 aa21.36■■□□□ 1.01
LTBR-202ENST00000440421 CNTLNQ9NXG0 1405 aa21.35■■□□□ 1.01
LTBR-202ENST00000440421 MAST1Q9Y2H9 1570 aa21.34■■□□□ 1.01
LTBR-202ENST00000440421 CLTCQ00610 1675 aaKnown RBP21.32■■□□□ 1
LTBR-202ENST00000440421 KIF3BO15066 747 aa21.32■■□□□ 1
LTBR-202ENST00000440421 HSPA2P54652 639 aa21.32■■□□□ 1
LTBR-202ENST00000440421 TCOF1Q13428 1488 aaKnown RBP21.31■■□□□ 1
LTBR-202ENST00000440421 ABCC5O15440 1437 aa21.29■■□□□ 1
LTBR-202ENST00000440421 MROH2AA6NES4 1674 aa21.29■■□□□ 1
LTBR-202ENST00000440421 PREX1Q8TCU6 1659 aa21.29■■□□□ 1
LTBR-202ENST00000440421 CROCC2H7BZ55 1655 aa21.28■■□□□ 1
LTBR-202ENST00000440421 ZMYM3Q14202 1370 aa21.28■■□□□ 1
LTBR-202ENST00000440421 PPARGC1BQ86YN6 1023 aaKnown RBP21.28■■□□□ 1
LTBR-202ENST00000440421 DNMT1P26358 1616 aaKnown RBP21.27■■□□□ 1
LTBR-202ENST00000440421 DAPK1P53355 1430 aa21.27■■□□□ 1
LTBR-202ENST00000440421 FAM50AQ14320 339 aaKnown RBP21.26■□□□□ 0.99
LTBR-202ENST00000440421 PPP6R1Q9UPN7 881 aa21.25■□□□□ 0.99
LTBR-202ENST00000440421 SHANK2Q9UPX8 1470 aa21.25■□□□□ 0.99
LTBR-202ENST00000440421 UHRF1BP1Q6BDS2 1440 aa21.24■□□□□ 0.99
LTBR-202ENST00000440421 RRP7BPQ9NSQ0 103 aa21.22■□□□□ 0.99
LTBR-202ENST00000440421 CHIC2Q9UKJ5 165 aa21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms