RNA–Protein interactions for RNA: ENST00000440083.6

TNFRSF1A-204, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,034 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-204ENST00000440083 GPATCH8Q9UKJ3 1502 aaKnown RBP22.55■■□□□ 1.2
TNFRSF1A-204ENST00000440083 NCOA2Q15596 1464 aa22.54■■□□□ 1.2
TNFRSF1A-204ENST00000440083 SUPT6HQ7KZ85 1726 aaKnown RBP22.54■■□□□ 1.2
TNFRSF1A-204ENST00000440083 APLP2Q06481 763 aa22.53■■□□□ 1.2
TNFRSF1A-204ENST00000440083 CCNB3Q8WWL7 1395 aa22.52■■□□□ 1.2
TNFRSF1A-204ENST00000440083 TRIM26Q12899 539 aaPredicted RBP22.52■■□□□ 1.2
TNFRSF1A-204ENST00000440083 PHLDB1Q86UU1 1377 aa22.51■■□□□ 1.19
TNFRSF1A-204ENST00000440083 FRMPD1Q5SYB0 1578 aa22.51■■□□□ 1.19
TNFRSF1A-204ENST00000440083 EFCAB2Q5VUJ9 269 aa22.51■■□□□ 1.19
TNFRSF1A-204ENST00000440083 PCGF6Q9BYE7 350 aa22.51■■□□□ 1.19
TNFRSF1A-204ENST00000440083 ADGRL1O94910 1474 aa22.51■■□□□ 1.19
TNFRSF1A-204ENST00000440083 RAPGEF3O95398 923 aa22.5■■□□□ 1.19
TNFRSF1A-204ENST00000440083 SCAPERQ9BY12 1400 aa22.47■■□□□ 1.19
TNFRSF1A-204ENST00000440083 DENND4BO75064 1496 aaPredicted RBP22.47■■□□□ 1.19
TNFRSF1A-204ENST00000440083 RICTORQ6R327 1708 aa22.46■■□□□ 1.19
TNFRSF1A-204ENST00000440083 SAMD9LQ8IVG5 1584 aa22.46■■□□□ 1.19
TNFRSF1A-204ENST00000440083 ITSN2Q9NZM3 1697 aa22.46■■□□□ 1.19
TNFRSF1A-204ENST00000440083 ZNF777Q9ULD5 760 aaPredicted RBP22.45■■□□□ 1.18
TNFRSF1A-204ENST00000440083 ABCC1P33527 1531 aa22.45■■□□□ 1.18
TNFRSF1A-204ENST00000440083 ARHGEF12Q9NZN5 1544 aa22.43■■□□□ 1.18
TNFRSF1A-204ENST00000440083 POGZQ7Z3K3 1410 aa22.43■■□□□ 1.18
TNFRSF1A-204ENST00000440083 CFDP1Q9UEE9 299 aaPredicted RBP22.43■■□□□ 1.18
TNFRSF1A-204ENST00000440083 ZNF644Q9H582 1327 aaPredicted RBP22.4■■□□□ 1.18
TNFRSF1A-204ENST00000440083 SYCP2Q9BX26 1530 aa22.4■■□□□ 1.18
TNFRSF1A-204ENST00000440083 PPARGC1BQ86YN6 1023 aaKnown RBP22.38■■□□□ 1.17
TNFRSF1A-204ENST00000440083 TRAPPC8Q9Y2L5 1435 aa22.38■■□□□ 1.17
TNFRSF1A-204ENST00000440083 ZMYM4Q5VZL5 1548 aa22.36■■□□□ 1.17
TNFRSF1A-204ENST00000440083 MYOM3Q5VTT5 1437 aa22.35■■□□□ 1.17
TNFRSF1A-204ENST00000440083 CAMSAP2Q08AD1 1489 aa22.34■■□□□ 1.17
TNFRSF1A-204ENST00000440083 AFAP1Q8N556 730 aa22.34■■□□□ 1.17
TNFRSF1A-204ENST00000440083 HNRNPMP52272 730 aaKnown RBP eCLIP22.33■■□□□ 1.17
TNFRSF1A-204ENST00000440083 ZNF518AQ6AHZ1 1483 aa22.33■■□□□ 1.16
TNFRSF1A-204ENST00000440083 KDM5CP41229 1560 aa22.33■■□□□ 1.16
TNFRSF1A-204ENST00000440083 YEATS2Q9ULM3 1422 aa22.32■■□□□ 1.16
TNFRSF1A-204ENST00000440083 ARHGEF40Q8TER5 1519 aa22.32■■□□□ 1.16
TNFRSF1A-204ENST00000440083 PLEKHH2Q8IVE3 1493 aa22.32■■□□□ 1.16
TNFRSF1A-204ENST00000440083 KIAA1107Q9UPP5 1409 aa22.31■■□□□ 1.16
TNFRSF1A-204ENST00000440083 ZFYVE16Q7Z3T8 1539 aa22.3■■□□□ 1.16
TNFRSF1A-204ENST00000440083 MBD5Q9P267 1494 aa22.28■■□□□ 1.16
TNFRSF1A-204ENST00000440083 HECW2Q9P2P5 1572 aa22.28■■□□□ 1.16
TNFRSF1A-204ENST00000440083 MIA2Q96PC5 1412 aa22.26■■□□□ 1.15
TNFRSF1A-204ENST00000440083 FGD6Q6ZV73 1430 aa22.25■■□□□ 1.15
TNFRSF1A-204ENST00000440083 MAGI2Q86UL8 1455 aa22.25■■□□□ 1.15
TNFRSF1A-204ENST00000440083 PTPN23Q9H3S7 1636 aa22.24■■□□□ 1.15
TNFRSF1A-204ENST00000440083 SIGLEC1Q9BZZ2 1709 aa22.23■■□□□ 1.15
TNFRSF1A-204ENST00000440083 ABCA6Q8N139 1617 aa22.23■■□□□ 1.15
TNFRSF1A-204ENST00000440083 KIDINS220Q9ULH0 1771 aa22.22■■□□□ 1.15
TNFRSF1A-204ENST00000440083 MLH3Q9UHC1 1453 aa22.22■■□□□ 1.15
TNFRSF1A-204ENST00000440083 DIP2CQ9Y2E4 1556 aa22.22■■□□□ 1.15
TNFRSF1A-204ENST00000440083 MYT1LQ9UL68 1186 aa22.22■■□□□ 1.15
TNFRSF1A-204ENST00000440083 CCDC141Q6ZP82 1450 aa22.21■■□□□ 1.15
TNFRSF1A-204ENST00000440083 INO80Q9ULG1 1556 aaPredicted RBP22.21■■□□□ 1.15
TNFRSF1A-204ENST00000440083 SPAG9O60271 1321 aaKnown RBP22.2■■□□□ 1.14
TNFRSF1A-204ENST00000440083 ARHGEF5Q12774 1597 aa22.2■■□□□ 1.14
TNFRSF1A-204ENST00000440083 ATP7AQ04656 1500 aa22.19■■□□□ 1.14
TNFRSF1A-204ENST00000440083 TCOF1Q13428 1488 aaKnown RBP22.18■■□□□ 1.14
TNFRSF1A-204ENST00000440083 AEBP2Q6ZN18 517 aaPredicted RBP22.18■■□□□ 1.14
TNFRSF1A-204ENST00000440083 ATP10AO60312 1499 aa22.16■■□□□ 1.14
TNFRSF1A-204ENST00000440083 C9orf84Q5VXU9 1444 aa22.15■■□□□ 1.14
TNFRSF1A-204ENST00000440083 KDM4FA0A1W2PPD8 638 aa22.13■■□□□ 1.13
TNFRSF1A-204ENST00000440083 ARID4BQ4LE39 1312 aaPredicted RBP22.12■■□□□ 1.13
TNFRSF1A-204ENST00000440083 FAM50AQ14320 339 aaKnown RBP22.11■■□□□ 1.13
TNFRSF1A-204ENST00000440083 ABCC5O15440 1437 aa22.11■■□□□ 1.13
TNFRSF1A-204ENST00000440083 CROCC2H7BZ55 1655 aa22.11■■□□□ 1.13
TNFRSF1A-204ENST00000440083 DNMT1P26358 1616 aaKnown RBP22.09■■□□□ 1.13
TNFRSF1A-204ENST00000440083 DAPK1P53355 1430 aa22.09■■□□□ 1.13
TNFRSF1A-204ENST00000440083 REREQ9P2R6 1566 aa22.08■■□□□ 1.13
TNFRSF1A-204ENST00000440083 RSPH4AQ5TD94 716 aa22.08■■□□□ 1.13
TNFRSF1A-204ENST00000440083 BCORL1Q5H9F3 1711 aa22.08■■□□□ 1.12
TNFRSF1A-204ENST00000440083 MAST1Q9Y2H9 1570 aa22.08■■□□□ 1.12
TNFRSF1A-204ENST00000440083 ADGBQ8N7X0 1667 aa22.07■■□□□ 1.12
TNFRSF1A-204ENST00000440083 RTEL1-TNFRSF6BF6WH68 1400 aa22.07■■□□□ 1.12
TNFRSF1A-204ENST00000440083 A2MP01023 1474 aa22.05■■□□□ 1.12
TNFRSF1A-204ENST00000440083 TSPY4P0CV99 314 aa22.05■■□□□ 1.12
TNFRSF1A-204ENST00000440083 TSPY10P0CW01 314 aa22.05■■□□□ 1.12
TNFRSF1A-204ENST00000440083 MLECQ14165 292 aa22.05■■□□□ 1.12
TNFRSF1A-204ENST00000440083 PLXNC1O60486 1568 aa22.04■■□□□ 1.12
TNFRSF1A-204ENST00000440083 SHANK2Q9UPX8 1470 aa22.04■■□□□ 1.12
TNFRSF1A-204ENST00000440083 ADAMTSL3P82987 1691 aa22.04■■□□□ 1.12
TNFRSF1A-204ENST00000440083 MADDQ8WXG6 1647 aa22.02■■□□□ 1.12
TNFRSF1A-204ENST00000440083 AGLP35573 1532 aa22.01■■□□□ 1.11
TNFRSF1A-204ENST00000440083 RRBP1Q9P2E9 1410 aaKnown RBP22■■□□□ 1.11
TNFRSF1A-204ENST00000440083 CHIC2Q9UKJ5 165 aa22■■□□□ 1.11
TNFRSF1A-204ENST00000440083 PTPRKQ15262 1439 aa21.99■■□□□ 1.11
TNFRSF1A-204ENST00000440083 HRCP23327 699 aa21.97■■□□□ 1.11
TNFRSF1A-204ENST00000440083 DHX29Q7Z478 1369 aaKnown RBP21.97■■□□□ 1.11
TNFRSF1A-204ENST00000440083 RIMS1Q86UR5 1692 aaKnown RBP21.96■■□□□ 1.11
TNFRSF1A-204ENST00000440083 ITGAEP38570 1179 aa21.95■■□□□ 1.1
TNFRSF1A-204ENST00000440083 KIF15Q9NS87 1388 aa21.95■■□□□ 1.1
TNFRSF1A-204ENST00000440083 FER1L4A9Z1Z3 1794 aa21.94■■□□□ 1.1
TNFRSF1A-204ENST00000440083 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.93■■□□□ 1.1
TNFRSF1A-204ENST00000440083 RRP7BPQ9NSQ0 103 aa21.93■■□□□ 1.1
TNFRSF1A-204ENST00000440083 ADGRL2O95490 1459 aa21.91■■□□□ 1.1
TNFRSF1A-204ENST00000440083 DUOX2Q9NRD8 1548 aa21.9■■□□□ 1.1
TNFRSF1A-204ENST00000440083 NCOA1Q15788 1441 aa21.9■■□□□ 1.1
TNFRSF1A-204ENST00000440083 ANKRD30AQ9BXX3 1397 aa21.9■■□□□ 1.1
TNFRSF1A-204ENST00000440083 PTPRMP28827 1452 aa21.9■■□□□ 1.1
TNFRSF1A-204ENST00000440083 KIF3BO15066 747 aa21.88■■□□□ 1.09
TNFRSF1A-204ENST00000440083 GGT6Q6P531 493 aa21.87■■□□□ 1.09
TNFRSF1A-204ENST00000440083 PLPPR3Q6T4P5 718 aa21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms