RNA–Protein interactions for RNA: ENST00000440053.1

VIL1-204, Transcript of villin 1, humanhuman

TSL 1 (best) BASIC

Gene VIL1, Length 1,454 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIL1-204ENST00000440053 ARHGAP5Q13017 1502 aa33.28■■■□□ 2.92
VIL1-204ENST00000440053 YEATS2Q9ULM3 1422 aa33.26■■■□□ 2.91
VIL1-204ENST00000440053 POGZQ7Z3K3 1410 aa33.24■■■□□ 2.91
VIL1-204ENST00000440053 AFAP1Q8N556 730 aa33.24■■■□□ 2.91
VIL1-204ENST00000440053 ZMYM4Q5VZL5 1548 aa33.2■■■□□ 2.91
VIL1-204ENST00000440053 CDC42BPBQ9Y5S2 1711 aa33.2■■■□□ 2.9
VIL1-204ENST00000440053 ARHGEF40Q8TER5 1519 aa33.19■■■□□ 2.9
VIL1-204ENST00000440053 ZFYVE16Q7Z3T8 1539 aa33.16■■■□□ 2.9
VIL1-204ENST00000440053 MAGI2Q86UL8 1455 aa33.15■■■□□ 2.9
VIL1-204ENST00000440053 ZNF777Q9ULD5 760 aaPredicted RBP33.14■■■□□ 2.9
VIL1-204ENST00000440053 MTUS2Q5JR59 1369 aa33.13■■■□□ 2.89
VIL1-204ENST00000440053 PREX2Q70Z35 1606 aa33.12■■■□□ 2.89
VIL1-204ENST00000440053 ARHGEF12Q9NZN5 1544 aa33.11■■■□□ 2.89
VIL1-204ENST00000440053 ADAMTSL3P82987 1691 aa33.11■■■□□ 2.89
VIL1-204ENST00000440053 MYT1LQ9UL68 1186 aa33.1■■■□□ 2.89
VIL1-204ENST00000440053 GPATCH8Q9UKJ3 1502 aaKnown RBP33.09■■■□□ 2.89
VIL1-204ENST00000440053 MLECQ14165 292 aa33.09■■■□□ 2.89
VIL1-204ENST00000440053 BCORL1Q5H9F3 1711 aa33.09■■■□□ 2.89
VIL1-204ENST00000440053 CDC42BPAQ5VT25 1732 aa33.09■■■□□ 2.89
VIL1-204ENST00000440053 SIGLEC1Q9BZZ2 1709 aa33.09■■■□□ 2.89
VIL1-204ENST00000440053 TRAPPC8Q9Y2L5 1435 aa33.09■■■□□ 2.89
VIL1-204ENST00000440053 ZNF518AQ6AHZ1 1483 aa33.08■■■□□ 2.89
VIL1-204ENST00000440053 ATP10AO60312 1499 aa33.04■■■□□ 2.88
VIL1-204ENST00000440053 PTPRMP28827 1452 aa33.04■■■□□ 2.88
VIL1-204ENST00000440053 CCNB3Q8WWL7 1395 aa33.03■■■□□ 2.88
VIL1-204ENST00000440053 HNRNPMP52272 730 aaKnown RBP eCLIP33.03■■■□□ 2.88
VIL1-204ENST00000440053 CFDP1Q9UEE9 299 aaPredicted RBP33.03■■■□□ 2.88
VIL1-204ENST00000440053 ABCC1P33527 1531 aa33.02■■■□□ 2.88
VIL1-204ENST00000440053 MADDQ8WXG6 1647 aa33.01■■■□□ 2.87
VIL1-204ENST00000440053 KDM5CP41229 1560 aa33.01■■■□□ 2.87
VIL1-204ENST00000440053 PLPPR3Q6T4P5 718 aa32.97■■■□□ 2.87
VIL1-204ENST00000440053 SAMD9LQ8IVG5 1584 aa32.97■■■□□ 2.87
VIL1-204ENST00000440053 C9orf84Q5VXU9 1444 aa32.96■■■□□ 2.87
VIL1-204ENST00000440053 VPS8Q8N3P4 1428 aa32.96■■■□□ 2.87
VIL1-204ENST00000440053 ZNF644Q9H582 1327 aaPredicted RBP32.95■■■□□ 2.86
VIL1-204ENST00000440053 ITSN2Q9NZM3 1697 aa32.95■■■□□ 2.86
VIL1-204ENST00000440053 HECW2Q9P2P5 1572 aa32.94■■■□□ 2.86
VIL1-204ENST00000440053 EHBP1L1Q8N3D4 1523 aa32.93■■■□□ 2.86
VIL1-204ENST00000440053 MLH3Q9UHC1 1453 aa32.93■■■□□ 2.86
VIL1-204ENST00000440053 SYCP2Q9BX26 1530 aa32.9■■■□□ 2.86
VIL1-204ENST00000440053 RIMS1Q86UR5 1692 aaKnown RBP32.9■■■□□ 2.86
VIL1-204ENST00000440053 DIP2CQ9Y2E4 1556 aa32.89■■■□□ 2.86
VIL1-204ENST00000440053 TIAM1Q13009 1591 aa32.88■■■□□ 2.85
VIL1-204ENST00000440053 ABCA6Q8N139 1617 aa32.86■■■□□ 2.85
VIL1-204ENST00000440053 KANK4Q5T7N3 995 aaPredicted RBP32.85■■■□□ 2.85
VIL1-204ENST00000440053 KIAA1107Q9UPP5 1409 aa32.84■■■□□ 2.85
VIL1-204ENST00000440053 SPAG9O60271 1321 aaKnown RBP32.84■■■□□ 2.85
VIL1-204ENST00000440053 NCOA2Q15596 1464 aa32.83■■■□□ 2.85
VIL1-204ENST00000440053 KIDINS220Q9ULH0 1771 aa32.82■■■□□ 2.84
VIL1-204ENST00000440053 PLEKHH2Q8IVE3 1493 aa32.79■■■□□ 2.84
VIL1-204ENST00000440053 LRRC9Q6ZRR7 1453 aa32.78■■■□□ 2.84
VIL1-204ENST00000440053 CEBPAP49715 358 aaPredicted RBP32.78■■■□□ 2.84
VIL1-204ENST00000440053 SUPT6HQ7KZ85 1726 aaKnown RBP32.75■■■□□ 2.83
VIL1-204ENST00000440053 REREQ9P2R6 1566 aa32.74■■■□□ 2.83
VIL1-204ENST00000440053 FER1L4A9Z1Z3 1794 aa32.74■■■□□ 2.83
VIL1-204ENST00000440053 MBD5Q9P267 1494 aa32.73■■■□□ 2.83
VIL1-204ENST00000440053 AGLP35573 1532 aa32.68■■■□□ 2.82
VIL1-204ENST00000440053 ATP7AQ04656 1500 aa32.68■■■□□ 2.82
VIL1-204ENST00000440053 LMTK3Q96Q04 1460 aa32.66■■■□□ 2.82
VIL1-204ENST00000440053 MAP3K1Q13233 1512 aa32.66■■■□□ 2.82
VIL1-204ENST00000440053 HSPA2P54652 639 aa32.64■■■□□ 2.82
VIL1-204ENST00000440053 CAMSAP2Q08AD1 1489 aa32.64■■■□□ 2.82
VIL1-204ENST00000440053 INO80Q9ULG1 1556 aaPredicted RBP32.63■■■□□ 2.81
VIL1-204ENST00000440053 APLP2Q06481 763 aa32.61■■■□□ 2.81
VIL1-204ENST00000440053 ESF1Q9H501 851 aaKnown RBP32.61■■■□□ 2.81
VIL1-204ENST00000440053 A2MP01023 1474 aa32.59■■■□□ 2.81
VIL1-204ENST00000440053 GGT6Q6P531 493 aa32.55■■■□□ 2.8
VIL1-204ENST00000440053 RSPH4AQ5TD94 716 aa32.54■■■□□ 2.8
VIL1-204ENST00000440053 CCDC141Q6ZP82 1450 aa32.54■■■□□ 2.8
VIL1-204ENST00000440053 RTEL1-TNFRSF6BF6WH68 1400 aa32.54■■■□□ 2.8
VIL1-204ENST00000440053 PLXNC1O60486 1568 aa32.51■■■□□ 2.79
VIL1-204ENST00000440053 MYOM3Q5VTT5 1437 aa32.5■■■□□ 2.79
VIL1-204ENST00000440053 TSPY4P0CV99 314 aa32.48■■■□□ 2.79
VIL1-204ENST00000440053 TSPY10P0CW01 314 aa32.48■■■□□ 2.79
VIL1-204ENST00000440053 DHX29Q7Z478 1369 aaKnown RBP32.48■■■□□ 2.79
VIL1-204ENST00000440053 C3P01024 1663 aa32.46■■■□□ 2.79
VIL1-204ENST00000440053 ADGBQ8N7X0 1667 aa32.45■■■□□ 2.78
VIL1-204ENST00000440053 ZMYM3Q14202 1370 aa32.44■■■□□ 2.78
VIL1-204ENST00000440053 MIA2Q96PC5 1412 aa32.44■■■□□ 2.78
VIL1-204ENST00000440053 ARHGEF5Q12774 1597 aa32.43■■■□□ 2.78
VIL1-204ENST00000440053 CNTLNQ9NXG0 1405 aa32.43■■■□□ 2.78
VIL1-204ENST00000440053 KIF3BO15066 747 aa32.42■■■□□ 2.78
VIL1-204ENST00000440053 PREX1Q8TCU6 1659 aa32.37■■■□□ 2.77
VIL1-204ENST00000440053 UHRF1BP1Q6BDS2 1440 aa32.36■■■□□ 2.77
VIL1-204ENST00000440053 CLTCQ00610 1675 aaKnown RBP32.35■■■□□ 2.77
VIL1-204ENST00000440053 ILDR1Q86SU0 546 aaPredicted RBP32.34■■■□□ 2.77
VIL1-204ENST00000440053 PPP6R1Q9UPN7 881 aa32.33■■■□□ 2.77
VIL1-204ENST00000440053 SETD1BQ9UPS6 1966 aaKnown RBP32.31■■■□□ 2.76
VIL1-204ENST00000440053 MROH2AA6NES4 1674 aa32.29■■■□□ 2.76
VIL1-204ENST00000440053 PTPN23Q9H3S7 1636 aa32.27■■■□□ 2.76
VIL1-204ENST00000440053 FGD6Q6ZV73 1430 aa32.27■■■□□ 2.76
VIL1-204ENST00000440053 ABCC5O15440 1437 aa32.26■■■□□ 2.75
VIL1-204ENST00000440053 MAST1Q9Y2H9 1570 aa32.26■■■□□ 2.75
VIL1-204ENST00000440053 NPATQ14207 1427 aa32.24■■■□□ 2.75
VIL1-204ENST00000440053 PTPRKQ15262 1439 aa32.24■■■□□ 2.75
VIL1-204ENST00000440053 WASHC2CQ9Y4E1 1318 aa32.23■■■□□ 2.75
VIL1-204ENST00000440053 RRP7BPQ9NSQ0 103 aa32.22■■■□□ 2.75
VIL1-204ENST00000440053 FBXO31Q5XUX0 539 aaPredicted RBP32.21■■■□□ 2.75
VIL1-204ENST00000440053 CHIC2Q9UKJ5 165 aa32.2■■■□□ 2.75
VIL1-204ENST00000440053 PPARGC1BQ86YN6 1023 aaKnown RBP32.19■■■□□ 2.74
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms