RNA–Protein interactions for RNA: ENST00000439526.6

FMR1-207, Transcript of fragile X mental retardation 1, humanhuman

TSL 1 (best) BASIC

Gene FMR1, Length 3,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FMR1-207ENST00000439526 PKD2Q13563 968 aa26.62■■□□□ 1.85
FMR1-207ENST00000439526 PTPN23Q9H3S7 1636 aa26.61■■□□□ 1.85
FMR1-207ENST00000439526 HFM1A2PYH4 1435 aa26.61■■□□□ 1.85
FMR1-207ENST00000439526 NUP160Q12769 1436 aa26.6■■□□□ 1.85
FMR1-207ENST00000439526 RGL3Q3MIN7 710 aa26.59■■□□□ 1.85
FMR1-207ENST00000439526 L3MBTL2Q969R5 705 aa26.58■■□□□ 1.85
FMR1-207ENST00000439526 UACAQ9BZF9 1416 aa26.57■■□□□ 1.84
FMR1-207ENST00000439526 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.56■■□□□ 1.84
FMR1-207ENST00000439526 SCAF1Q9H7N4 1312 aaKnown RBP26.56■■□□□ 1.84
FMR1-207ENST00000439526 RAPGEF6Q8TEU7 1601 aa26.56■■□□□ 1.84
FMR1-207ENST00000439526 ARHGEF11O15085 1522 aa26.55■■□□□ 1.84
FMR1-207ENST00000439526 NUP155O75694 1391 aa26.53■■□□□ 1.84
FMR1-207ENST00000439526 MAPKBP1O60336 1514 aa26.53■■□□□ 1.84
FMR1-207ENST00000439526 MIA2Q96PC5 1412 aa26.53■■□□□ 1.84
FMR1-207ENST00000439526 ANP32CO43423 234 aa26.52■■□□□ 1.84
FMR1-207ENST00000439526 ANKRD30AQ9BXX3 1397 aa26.52■■□□□ 1.84
FMR1-207ENST00000439526 ATP10BO94823 1461 aa26.5■■□□□ 1.83
FMR1-207ENST00000439526 DAPK1P53355 1430 aa26.5■■□□□ 1.83
FMR1-207ENST00000439526 OSCARQ8IYS5 282 aa26.49■■□□□ 1.83
FMR1-207ENST00000439526 ABCC5O15440 1437 aa26.48■■□□□ 1.83
FMR1-207ENST00000439526 LRRIQ1Q96JM4 1722 aa26.46■■□□□ 1.83
FMR1-207ENST00000439526 EIF4G2P78344 907 aaKnown RBP eCLIP26.45■■□□□ 1.82
FMR1-207ENST00000439526 TIMELESSQ9UNS1 1208 aa26.45■■□□□ 1.82
FMR1-207ENST00000439526 EFCAB2Q5VUJ9 269 aa26.43■■□□□ 1.82
FMR1-207ENST00000439526 HSPA5P11021 654 aaKnown RBP26.42■■□□□ 1.82
FMR1-207ENST00000439526 GPATCH8Q9UKJ3 1502 aaKnown RBP26.41■■□□□ 1.82
FMR1-207ENST00000439526 SENP3Q9H4L4 574 aaPredicted RBP26.4■■□□□ 1.82
FMR1-207ENST00000439526 CAMSAP2Q08AD1 1489 aa26.4■■□□□ 1.82
FMR1-207ENST00000439526 AFAP1Q8N556 730 aa26.38■■□□□ 1.81
FMR1-207ENST00000439526 DCAF11Q8TEB1 546 aa26.36■■□□□ 1.81
FMR1-207ENST00000439526 KIF15Q9NS87 1388 aa26.35■■□□□ 1.81
FMR1-207ENST00000439526 CYB5RLQ6IPT4 315 aa26.35■■□□□ 1.81
FMR1-207ENST00000439526 ANKRD50Q9ULJ7 1429 aa26.35■■□□□ 1.81
FMR1-207ENST00000439526 KIF14Q15058 1648 aa26.33■■□□□ 1.81
FMR1-207ENST00000439526 CHGAP10645 457 aaKnown RBP26.32■■□□□ 1.8
FMR1-207ENST00000439526 ERCC6L2Q5T890 1561 aa26.3■■□□□ 1.8
FMR1-207ENST00000439526 ARHGAP5Q13017 1502 aa26.3■■□□□ 1.8
FMR1-207ENST00000439526 C9orf84Q5VXU9 1444 aa26.3■■□□□ 1.8
FMR1-207ENST00000439526 CHD1O14646 1710 aa26.27■■□□□ 1.8
FMR1-207ENST00000439526 NCOA1Q15788 1441 aa26.27■■□□□ 1.8
FMR1-207ENST00000439526 SENP3-EIF4A1A0A087X0R7 540 aa26.27■■□□□ 1.8
FMR1-207ENST00000439526 TCOF1Q13428 1488 aaKnown RBP26.26■■□□□ 1.79
FMR1-207ENST00000439526 SPAG9O60271 1321 aaKnown RBP26.26■■□□□ 1.79
FMR1-207ENST00000439526 NBPF8Q3BBV2 869 aa26.25■■□□□ 1.79
FMR1-207ENST00000439526 CARD11Q9BXL7 1154 aa26.24■■□□□ 1.79
FMR1-207ENST00000439526 AKNAQ7Z591 1439 aa26.24■■□□□ 1.79
FMR1-207ENST00000439526 KDM6BO15054 1643 aa26.21■■□□□ 1.79
FMR1-207ENST00000439526 KIF3BO15066 747 aa26.21■■□□□ 1.79
FMR1-207ENST00000439526 ROCK1Q13464 1354 aa26.2■■□□□ 1.78
FMR1-207ENST00000439526 RSPH4AQ5TD94 716 aa26.19■■□□□ 1.78
FMR1-207ENST00000439526 GGT6Q6P531 493 aa26.17■■□□□ 1.78
FMR1-207ENST00000439526 FAM9BQ8IZU0 186 aa26.16■■□□□ 1.78
FMR1-207ENST00000439526 BCANQ96GW7 911 aa26.15■■□□□ 1.78
FMR1-207ENST00000439526 ABCA8O94911 1581 aa26.13■■□□□ 1.77
FMR1-207ENST00000439526 ANKRD30BQ9BXX2 1392 aa26.12■■□□□ 1.77
FMR1-207ENST00000439526 HNRNPUQ00839 825 aaKnown RBP eCLIP26.09■■□□□ 1.77
FMR1-207ENST00000439526 WASHC2AQ641Q2 1341 aa26.04■■□□□ 1.76
FMR1-207ENST00000439526 DNMT1P26358 1616 aaKnown RBP26.03■■□□□ 1.76
FMR1-207ENST00000439526 CCDC141Q6ZP82 1450 aa26.03■■□□□ 1.76
FMR1-207ENST00000439526 KIAA1107Q9UPP5 1409 aa26.03■■□□□ 1.76
FMR1-207ENST00000439526 MRS2Q9HD23 443 aa26.03■■□□□ 1.76
FMR1-207ENST00000439526 C11orf95C9JLR9 678 aaPredicted RBP26.02■■□□□ 1.76
FMR1-207ENST00000439526 PLPPR3Q6T4P5 718 aa26.02■■□□□ 1.76
FMR1-207ENST00000439526 SYCP2Q9BX26 1530 aa26.02■■□□□ 1.76
FMR1-207ENST00000439526 ABCC10Q5T3U5 1492 aa26.01■■□□□ 1.75
FMR1-207ENST00000439526 SCAPERQ9BY12 1400 aa26■■□□□ 1.75
FMR1-207ENST00000439526 ABCC2Q92887 1545 aa26■■□□□ 1.75
FMR1-207ENST00000439526 NEFLP07196 543 aa25.99■■□□□ 1.75
FMR1-207ENST00000439526 ITSN2Q9NZM3 1697 aa25.99■■□□□ 1.75
FMR1-207ENST00000439526 ST20-MTHFSA0A0A6YYL1 179 aa25.99■■□□□ 1.75
FMR1-207ENST00000439526 CCDC144AA2RUR9 1427 aa25.98■■□□□ 1.75
FMR1-207ENST00000439526 RAPGEF3O95398 923 aa25.98■■□□□ 1.75
FMR1-207ENST00000439526 PLEKHH2Q8IVE3 1493 aa25.97■■□□□ 1.75
FMR1-207ENST00000439526 ROCK2O75116 1388 aaKnown RBP25.94■■□□□ 1.74
FMR1-207ENST00000439526 MLECQ14165 292 aa25.93■■□□□ 1.74
FMR1-207ENST00000439526 TRAPPC8Q9Y2L5 1435 aa25.93■■□□□ 1.74
FMR1-207ENST00000439526 NUTM2DQ5VT03 806 aaPredicted RBP25.92■■□□□ 1.74
FMR1-207ENST00000439526 NBPF1Q3BBV0 1214 aa25.92■■□□□ 1.74
FMR1-207ENST00000439526 SALL2Q9Y467 1007 aaPredicted RBP25.92■■□□□ 1.74
FMR1-207ENST00000439526 USP47Q96K76 1375 aa25.91■■□□□ 1.74
FMR1-207ENST00000439526 PZPP20742 1482 aa25.91■■□□□ 1.74
FMR1-207ENST00000439526 DENND4BO75064 1496 aaPredicted RBP25.9■■□□□ 1.74
FMR1-207ENST00000439526 RPRD2Q5VT52 1461 aaKnown RBP25.9■■□□□ 1.74
FMR1-207ENST00000439526 PLCH2O75038 1416 aa25.89■■□□□ 1.73
FMR1-207ENST00000439526 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.89■■□□□ 1.73
FMR1-207ENST00000439526 KIF7Q2M1P5 1343 aa25.88■■□□□ 1.73
FMR1-207ENST00000439526 FAM69CQ0P6D2 419 aa25.88■■□□□ 1.73
FMR1-207ENST00000439526 ASXL2Q76L83 1435 aa25.87■■□□□ 1.73
FMR1-207ENST00000439526 KANK1Q14678 1352 aa25.87■■□□□ 1.73
FMR1-207ENST00000439526 TTC37Q6PGP7 1564 aa25.86■■□□□ 1.73
FMR1-207ENST00000439526 MBD5Q9P267 1494 aa25.86■■□□□ 1.73
FMR1-207ENST00000439526 GCC2Q8IWJ2 1684 aa25.85■■□□□ 1.73
FMR1-207ENST00000439526 FKBP8Q14318 412 aa25.84■■□□□ 1.73
FMR1-207ENST00000439526 CDC42BPAQ5VT25 1732 aa25.84■■□□□ 1.73
FMR1-207ENST00000439526 IRX6P78412 446 aaPredicted RBP25.83■■□□□ 1.73
FMR1-207ENST00000439526 FANCAO15360 1455 aa25.82■■□□□ 1.72
FMR1-207ENST00000439526 CCDC7Q96M83 1385 aa25.81■■□□□ 1.72
FMR1-207ENST00000439526 WASHC2CQ9Y4E1 1318 aa25.81■■□□□ 1.72
FMR1-207ENST00000439526 TMC1Q8TDI8 760 aa25.81■■□□□ 1.72
FMR1-207ENST00000439526 STAG3Q9UJ98 1225 aa25.81■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms